RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.18
TRAF4-209ENST00000473421 LINC00518Q8N0U6 118 aa7.65□□□□□ -1.18
TRAF4-209ENST00000473421 C11orf52Q96A22 123 aa7.65□□□□□ -1.18
TRAF4-209ENST00000473421 IGHV1-58A0A0C4DH39 117 aa7.64□□□□□ -1.19
TRAF4-209ENST00000473421 OR5A1Q8NGJ0 315 aa7.64□□□□□ -1.19
TRAF4-209ENST00000473421 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
TRAF4-209ENST00000473421 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
TRAF4-209ENST00000473421 UMAD1C9J7I0 102 aa7.63□□□□□ -1.19
TRAF4-209ENST00000473421 F2Z2F3 143 aa7.63□□□□□ -1.19
TRAF4-209ENST00000473421 F8W036 122 aa7.63□□□□□ -1.19
TRAF4-209ENST00000473421 IFNA1P01562 189 aa7.63□□□□□ -1.19
TRAF4-209ENST00000473421 TRGC1P0CF51 173 aa7.63□□□□□ -1.19
TRAF4-209ENST00000473421 RPS20P60866 119 aaKnown RBP7.63□□□□□ -1.19
TRAF4-209ENST00000473421 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
TRAF4-209ENST00000473421 SMDT1Q9H4I9 107 aa7.63□□□□□ -1.19
TRAF4-209ENST00000473421 CTRLP40313 264 aa7.62□□□□□ -1.19
TRAF4-209ENST00000473421 CTAG1AP78358 180 aa7.62□□□□□ -1.19
TRAF4-209ENST00000473421 TWIST1Q15672 202 aa7.62□□□□□ -1.19
TRAF4-209ENST00000473421 C1orf137Q5JT78 98 aa7.62□□□□□ -1.19
TRAF4-209ENST00000473421 SMCO4Q9NRQ5 59 aa7.62□□□□□ -1.19
TRAF4-209ENST00000473421 GNG13Q9P2W3 67 aa7.62□□□□□ -1.19
TRAF4-209ENST00000473421 SDHAF1A6NFY7 115 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.61□□□□□ -1.19
TRAF4-209ENST00000473421 TSHBP01222 138 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 APCSP02743 223 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 MT-ND6P03923 174 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 S100A8P05109 93 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 CAMPP49913 170 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 RAB5BP61020 215 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 MEF2BQ02080 365 aaPredicted RBP7.61□□□□□ -1.19
TRAF4-209ENST00000473421 FAM74A3Q4VXF1 159 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 LCE2AQ5TA79 106 aaPredicted RBP7.61□□□□□ -1.19
TRAF4-209ENST00000473421 NUDT10Q8NFP7 164 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 NUDT11Q96G61 164 aa7.61□□□□□ -1.19
TRAF4-209ENST00000473421 LOC107984640A0A0U1RRK4 108 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 ZNF561-AS1K7EIQ3 104 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 NCR2O95944 276 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 KRTAP1-4P0C5Y4 121 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 ESDP10768 282 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 ZNF664Q8N3J9 261 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 NUP35Q8NFH5 326 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 OPRPNQ99935 248 aaPredicted RBP7.6□□□□□ -1.19
TRAF4-209ENST00000473421 CNFNQ9BYD5 112 aa7.6□□□□□ -1.19
TRAF4-209ENST00000473421 RNASE7Q9H1E1 156 aaKnown RBP7.6□□□□□ -1.19
TRAF4-209ENST00000473421 FAM168BA1KXE4 195 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 H7C423 109 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 SMIM6P0DI80 62 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 GNG4P50150 75 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 PEA15Q15121 130 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 CD164L2Q6UWJ8 174 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 TMEM242Q9NWH2 141 aa7.59□□□□□ -1.19
TRAF4-209ENST00000473421 K7EN84 100 aa7.58□□□□□ -1.2
TRAF4-209ENST00000473421 ADCYAP1P18509 176 aa7.58□□□□□ -1.2
TRAF4-209ENST00000473421 PRR4Q16378 134 aa7.58□□□□□ -1.2
TRAF4-209ENST00000473421 RNASE13Q5GAN3 156 aaKnown RBP7.58□□□□□ -1.2
TRAF4-209ENST00000473421 KRTAP7-1Q8IUC3 87 aa7.58□□□□□ -1.2
TRAF4-209ENST00000473421 MT-ND4LP03901 98 aa7.57□□□□□ -1.2
TRAF4-209ENST00000473421 ZNF25P17030 456 aaPredicted RBP7.57□□□□□ -1.2
TRAF4-209ENST00000473421 PMCHP20382 165 aa7.57□□□□□ -1.2
TRAF4-209ENST00000473421 RHEBQ15382 184 aa7.57□□□□□ -1.2
TRAF4-209ENST00000473421 XKRY2A2RUG3 117 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 C1orf196B1AJZ1 125 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 H0Y9J4 135 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 I3L3M4 83 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 APOMO95445 188 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
TRAF4-209ENST00000473421 SS18Q15532 418 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 BTF3L4Q96K17 158 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 CAMK2N2Q96S95 79 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
TRAF4-209ENST00000473421 TRAV1-1A0A0B4J248 108 aa7.55□□□□□ -1.2
TRAF4-209ENST00000473421 TRBV6-5A0A0K0K1A5 114 aa7.55□□□□□ -1.2
TRAF4-209ENST00000473421 C5orf38Q86SI9 138 aa7.55□□□□□ -1.2
TRAF4-209ENST00000473421 MRPL52Q86TS9 123 aaKnown RBP7.55□□□□□ -1.2
TRAF4-209ENST00000473421 DIRC1Q969H9 104 aa7.55□□□□□ -1.2
TRAF4-209ENST00000473421 TMEM101Q96IK0 257 aa7.55□□□□□ -1.2
TRAF4-209ENST00000473421 RPP21Q9H633 154 aaKnown RBP7.55□□□□□ -1.2
TRAF4-209ENST00000473421 PKIGQ9Y2B9 76 aa7.55□□□□□ -1.2
TRAF4-209ENST00000473421 A0A087WZ39 114 aa7.54□□□□□ -1.2
TRAF4-209ENST00000473421 CBLN2Q8IUK8 224 aa7.54□□□□□ -1.2
TRAF4-209ENST00000473421 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
TRAF4-209ENST00000473421 SMIM12Q96EX1 92 aa7.54□□□□□ -1.2
TRAF4-209ENST00000473421 C12orf57Q99622 126 aa7.54□□□□□ -1.2
TRAF4-209ENST00000473421 COLCA2A8K830 154 aa7.53□□□□□ -1.2
TRAF4-209ENST00000473421 COX7A2LO14548 114 aa7.53□□□□□ -1.2
TRAF4-209ENST00000473421 S100A6P06703 90 aa7.53□□□□□ -1.2
TRAF4-209ENST00000473421 AKR1D1P51857 326 aa7.53□□□□□ -1.2
TRAF4-209ENST00000473421 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
TRAF4-209ENST00000473421 C10orf25Q5T742 122 aa7.53□□□□□ -1.2
TRAF4-209ENST00000473421 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
TRAF4-209ENST00000473421 TRAV13-1A0A0B4J241 112 aa7.52□□□□□ -1.21
TRAF4-209ENST00000473421 MALP21145 153 aa7.52□□□□□ -1.21
TRAF4-209ENST00000473421 ISOC2Q96AB3 205 aa7.52□□□□□ -1.21
TRAF4-209ENST00000473421 IGLV1-50A0A075B6I6 118 aa7.51□□□□□ -1.21
TRAF4-209ENST00000473421 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
TRAF4-209ENST00000473421 SMKR1H3BMG3 65 aa7.51□□□□□ -1.21
TRAF4-209ENST00000473421 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms