RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
SF1-213ENST00000472725 EREGO14944 169 aa13.32□□□□□ -0.28
SF1-213ENST00000472725 ZNF664Q8N3J9 261 aa13.32□□□□□ -0.28
SF1-213ENST00000472725 PYGO1Q9Y3Y4 419 aa13.32□□□□□ -0.28
SF1-213ENST00000472725 CYSLTR1Q9Y271 337 aa13.31□□□□□ -0.28
SF1-213ENST00000472725 CCL25O15444 150 aa13.3□□□□□ -0.28
SF1-213ENST00000472725 NPSP0C0P6 89 aa13.3□□□□□ -0.28
SF1-213ENST00000472725 RPL39P62891 51 aaKnown RBP13.3□□□□□ -0.28
SF1-213ENST00000472725 MRPS36P82909 103 aaKnown RBP13.3□□□□□ -0.28
SF1-213ENST00000472725 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
SF1-213ENST00000472725 C18orf32Q8TCD1 76 aa13.3□□□□□ -0.28
SF1-213ENST00000472725 RAB5BP61020 215 aa13.29□□□□□ -0.28
SF1-213ENST00000472725 CLPSL2Q6UWE3 100 aa13.29□□□□□ -0.28
SF1-213ENST00000472725 C2orf66Q6UXQ4 117 aa13.29□□□□□ -0.28
SF1-213ENST00000472725 A0A087WTM6 91 aa13.28□□□□□ -0.28
SF1-213ENST00000472725 A0A1B0GVY2 172 aa13.28□□□□□ -0.28
SF1-213ENST00000472725 LRCOL1A6NCL2 159 aa13.27□□□□□ -0.29
SF1-213ENST00000472725 ATP6V1G1O75348 118 aa13.27□□□□□ -0.29
SF1-213ENST00000472725 AP5S1Q9NUS5 200 aa13.27□□□□□ -0.29
SF1-213ENST00000472725 SCO1O75880 301 aa13.26□□□□□ -0.29
SF1-213ENST00000472725 TRGC2P03986 189 aa13.26□□□□□ -0.29
SF1-213ENST00000472725 LINC00614P0C842 121 aa13.26□□□□□ -0.29
SF1-213ENST00000472725 FRAS1Q86XX4 4008 aa13.25□□□□□ -0.29
SF1-213ENST00000472725 SS18Q15532 418 aa13.25□□□□□ -0.29
SF1-213ENST00000472725 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
SF1-213ENST00000472725 TOMM6Q96B49 74 aa13.25□□□□□ -0.29
SF1-213ENST00000472725 LINC00959A0A1B0GUT2 108 aa13.24□□□□□ -0.29
SF1-213ENST00000472725 PAPPA-AS1Q5QFB9 102 aa13.24□□□□□ -0.29
SF1-213ENST00000472725 Q6ZUT4 128 aa13.24□□□□□ -0.29
SF1-213ENST00000472725 MAPKAPK5-AS1Q8N8E1 139 aa13.24□□□□□ -0.29
SF1-213ENST00000472725 DNAH2Q9P225 4427 aa13.23□□□□□ -0.29
SF1-213ENST00000472725 IGLV10-54A0A075B6I4 117 aa13.23□□□□□ -0.29
SF1-213ENST00000472725 IGKV3OR2-268A0A0C4DH90 116 aa13.23□□□□□ -0.29
SF1-213ENST00000472725 C1orf196B1AJZ1 125 aa13.23□□□□□ -0.29
SF1-213ENST00000472725 TMEM141Q96I45 108 aa13.23□□□□□ -0.29
SF1-213ENST00000472725 TIMM17AQ99595 171 aa13.23□□□□□ -0.29
SF1-213ENST00000472725 DNAH10Q8IVF4 4471 aa13.22□□□□□ -0.29
SF1-213ENST00000472725 IGIPA6NJ69 53 aa13.22□□□□□ -0.29
SF1-213ENST00000472725 C14orf177Q52M58 125 aa13.22□□□□□ -0.29
SF1-213ENST00000472725 ERASQ7Z444 233 aa13.22□□□□□ -0.29
SF1-213ENST00000472725 CHCHD10Q8WYQ3 142 aaPredicted RBP13.22□□□□□ -0.29
SF1-213ENST00000472725 FAM104AQ969W3 186 aa13.22□□□□□ -0.29
SF1-213ENST00000472725 CHCHD1Q96BP2 118 aaKnown RBP13.22□□□□□ -0.29
SF1-213ENST00000472725 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.29
SF1-213ENST00000472725 Q6ZN92 141 aa13.21□□□□□ -0.29
SF1-213ENST00000472725 PGPEP1Q9NXJ5 209 aa13.21□□□□□ -0.29
SF1-213ENST00000472725 CDPF1Q6NVV7 123 aa13.2□□□□□ -0.3
SF1-213ENST00000472725 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
SF1-213ENST00000472725 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
SF1-213ENST00000472725 URB1-AS1Q96HZ7 61 aa13.2□□□□□ -0.3
SF1-213ENST00000472725 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
SF1-213ENST00000472725 TEX43Q6ZNM6 134 aa13.19□□□□□ -0.3
SF1-213ENST00000472725 Q8N814 137 aa13.19□□□□□ -0.3
SF1-213ENST00000472725 DNAH17Q9UFH2 4485 aa13.18□□□□□ -0.3
SF1-213ENST00000472725 GAGE12HA6NDE8 117 aa13.18□□□□□ -0.3
SF1-213ENST00000472725 RNASE13Q5GAN3 156 aaKnown RBP13.18□□□□□ -0.3
SF1-213ENST00000472725 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
SF1-213ENST00000472725 AMELXQ99217 191 aa13.18□□□□□ -0.3
SF1-213ENST00000472725 OPRPNQ99935 248 aaPredicted RBP13.18□□□□□ -0.3
SF1-213ENST00000472725 C2orf88Q9BSF0 95 aa13.18□□□□□ -0.3
SF1-213ENST00000472725 VCX2Q9H322 139 aa13.18□□□□□ -0.3
SF1-213ENST00000472725 TRAV13-1A0A0B4J241 112 aa13.17□□□□□ -0.3
SF1-213ENST00000472725 IFITM10A6NMD0 228 aa13.17□□□□□ -0.3
SF1-213ENST00000472725 HBDP02042 147 aa13.17□□□□□ -0.3
SF1-213ENST00000472725 CFAP161Q6P656 301 aa13.17□□□□□ -0.3
SF1-213ENST00000472725 SPATA12Q7Z6I5 190 aa13.17□□□□□ -0.3
SF1-213ENST00000472725 BAGE3Q86Y29 109 aa13.17□□□□□ -0.3
SF1-213ENST00000472725 XCL1P47992 114 aa13.16□□□□□ -0.3
SF1-213ENST00000472725 FOXI1Q12951 378 aa13.16□□□□□ -0.3
SF1-213ENST00000472725 USP17L23D6RBM5 183 aa13.15□□□□□ -0.3
SF1-213ENST00000472725 WFDC2Q14508 124 aa13.15□□□□□ -0.3
SF1-213ENST00000472725 FAT2Q9NYQ8 4349 aa13.15□□□□□ -0.3
SF1-213ENST00000472725 A0A096LNJ9 63 aa13.14□□□□□ -0.31
SF1-213ENST00000472725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.13□□□□□ -0.31
SF1-213ENST00000472725 LECT2O14960 151 aa13.13□□□□□ -0.31
SF1-213ENST00000472725 KRTAP10-2P60368 255 aa13.13□□□□□ -0.31
SF1-213ENST00000472725 HSBP1O75506 76 aa13.12□□□□□ -0.31
SF1-213ENST00000472725 ATP5LO75964 103 aa13.12□□□□□ -0.31
SF1-213ENST00000472725 SEC11AP67812 179 aa13.12□□□□□ -0.31
SF1-213ENST00000472725 PDZD11Q5EBL8 140 aa13.12□□□□□ -0.31
SF1-213ENST00000472725 LINC00173Q6ZV60 143 aa13.12□□□□□ -0.31
SF1-213ENST00000472725 FAM19A3Q7Z5A8 133 aa13.12□□□□□ -0.31
SF1-213ENST00000472725 UBE2D1P51668 147 aa13.11□□□□□ -0.31
SF1-213ENST00000472725 IGHV1-58A0A0C4DH39 117 aa13.1□□□□□ -0.31
SF1-213ENST00000472725 COX7A2LO14548 114 aa13.1□□□□□ -0.31
SF1-213ENST00000472725 IGHV3OR16-9A0A0B4J2B5 98 aa13.09□□□□□ -0.31
SF1-213ENST00000472725 C16orf90A8MZG2 172 aa13.09□□□□□ -0.31
SF1-213ENST00000472725 LINC00242Q5T6M2 205 aa13.09□□□□□ -0.31
SF1-213ENST00000472725 IGLV5-52A0A0A0MRZ9 124 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BKO60814 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 SERF1AO75920 110 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BJP06899 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BOP23527 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BBP33778 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BDP58876 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BCP62807 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 PMVKQ15126 192 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 PMCHL1Q16048 86 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST2H2BEQ16778 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms