RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 TRBV27A0A0K0K1C4 114 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 SRSF3P84103 164 aaKnown RBP5.75□□□□□ -1.49
USF1-204ENST00000472217 FOXI1Q12951 378 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 RIGQ13278 110 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 FAM74A3Q4VXF1 159 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 TMEM101Q96IK0 257 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 BTF3L4Q96K17 158 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 NAT8BQ9UHF3 227 aa5.75□□□□□ -1.49
USF1-204ENST00000472217 GVQW2A0A096LPI5 108 aaPredicted RBP5.74□□□□□ -1.49
USF1-204ENST00000472217 LINC00959A0A1B0GUT2 108 aa5.74□□□□□ -1.49
USF1-204ENST00000472217 C7orf77A4D0Y5 90 aa5.74□□□□□ -1.49
USF1-204ENST00000472217 CCL25O15444 150 aa5.74□□□□□ -1.49
USF1-204ENST00000472217 XCL1P47992 114 aa5.74□□□□□ -1.49
USF1-204ENST00000472217 HNRNPA3P51991 378 aaKnown RBP5.74□□□□□ -1.49
USF1-204ENST00000472217 MRPL52Q86TS9 123 aaKnown RBP5.74□□□□□ -1.49
USF1-204ENST00000472217 NRACQ8N912 160 aa5.74□□□□□ -1.49
USF1-204ENST00000472217 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
USF1-204ENST00000472217 NAT8Q9UHE5 227 aa5.74□□□□□ -1.49
USF1-204ENST00000472217 A0A087WYN8 130 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 SMIM27A0A1W2PRY6 76 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 OXTP01178 125 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 FCER1GP30273 86 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 SUMO2P61956 95 aaKnown RBP5.73□□□□□ -1.49
USF1-204ENST00000472217 COX6A2Q02221 97 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 PEA15Q15121 130 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 MRPL51Q4U2R6 128 aaKnown RBP5.73□□□□□ -1.49
USF1-204ENST00000472217 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 ZNF664Q8N3J9 261 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 DPH3Q96FX2 82 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 CDC42SE2Q9NRR3 84 aa5.73□□□□□ -1.49
USF1-204ENST00000472217 VCYO14598 125 aa5.72□□□□□ -1.49
USF1-204ENST00000472217 PPP1R17O96001 155 aa5.72□□□□□ -1.49
USF1-204ENST00000472217 CAMPP49913 170 aa5.72□□□□□ -1.49
USF1-204ENST00000472217 SS18Q15532 418 aa5.72□□□□□ -1.49
USF1-204ENST00000472217 PRSS3P2Q8NHM4 247 aa5.72□□□□□ -1.49
USF1-204ENST00000472217 LINC00526Q96FQ7 95 aa5.72□□□□□ -1.49
USF1-204ENST00000472217 PLAC8Q9NZF1 115 aa5.72□□□□□ -1.49
USF1-204ENST00000472217 IGHV1-58A0A0C4DH39 117 aa5.71□□□□□ -1.5
USF1-204ENST00000472217 IGKV2-24A0A0C4DH68 120 aa5.71□□□□□ -1.5
USF1-204ENST00000472217 A0A1B0GW15 77 aa5.71□□□□□ -1.5
USF1-204ENST00000472217 CD164L2Q6UWJ8 174 aa5.71□□□□□ -1.5
USF1-204ENST00000472217 KIR2DL4Q99706 377 aa5.71□□□□□ -1.5
USF1-204ENST00000472217 SMDT1Q9H4I9 107 aa5.71□□□□□ -1.5
USF1-204ENST00000472217 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.5
USF1-204ENST00000472217 A0A096LNI7 61 aa5.7□□□□□ -1.5
USF1-204ENST00000472217 LINC00862A6NCI5 91 aa5.7□□□□□ -1.5
USF1-204ENST00000472217 PPP1R2P9O14990 202 aa5.7□□□□□ -1.5
USF1-204ENST00000472217 MAJINQ3KP22 176 aa5.7□□□□□ -1.5
USF1-204ENST00000472217 RNASE13Q5GAN3 156 aaKnown RBP5.7□□□□□ -1.5
USF1-204ENST00000472217 MRPL54Q6P161 138 aaKnown RBP5.7□□□□□ -1.5
USF1-204ENST00000472217 C20orf78Q9BR46 151 aa5.7□□□□□ -1.5
USF1-204ENST00000472217 CSDC2Q9Y534 153 aaKnown RBP5.7□□□□□ -1.5
USF1-204ENST00000472217 TRBV24-1A0A075B6N3 115 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 A0A1B0GXF2 115 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 PHOX2AO14813 284 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 TNFRSF6BO95407 300 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 CKS2P33552 79 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 RPL32P62910 135 aaKnown RBP5.69□□□□□ -1.5
USF1-204ENST00000472217 HBBP68871 147 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 SMAGPQ0VAQ4 97 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 Q6ZUT4 128 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 STPG4Q8N801 248 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
USF1-204ENST00000472217 C1orf196B1AJZ1 125 aa5.68□□□□□ -1.5
USF1-204ENST00000472217 D6R8Y8 96 aa5.68□□□□□ -1.5
USF1-204ENST00000472217 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
USF1-204ENST00000472217 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
USF1-204ENST00000472217 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
USF1-204ENST00000472217 TMEM18Q96B42 140 aa5.68□□□□□ -1.5
USF1-204ENST00000472217 TIMM21Q9BVV7 248 aa5.68□□□□□ -1.5
USF1-204ENST00000472217 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
USF1-204ENST00000472217 TRAV13-1A0A0B4J241 112 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 F8W036 122 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 COX7A2LO14548 114 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 NPYP01303 97 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 S100A8P05109 93 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 MALP21145 153 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 RPL39P62891 51 aaKnown RBP5.67□□□□□ -1.5
USF1-204ENST00000472217 SYCNQ0VAF6 134 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 Q6ZRU5 148 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 PKIGQ9Y2B9 76 aa5.67□□□□□ -1.5
USF1-204ENST00000472217 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
USF1-204ENST00000472217 TCAPO15273 167 aa5.66□□□□□ -1.5
USF1-204ENST00000472217 GHRHP01286 108 aa5.66□□□□□ -1.5
USF1-204ENST00000472217 PPBPP02775 128 aa5.66□□□□□ -1.5
USF1-204ENST00000472217 MT1HL1P0DM35 61 aa5.66□□□□□ -1.5
USF1-204ENST00000472217 FAM104AQ969W3 186 aa5.66□□□□□ -1.5
USF1-204ENST00000472217 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
USF1-204ENST00000472217 PRR3P79522 188 aaKnown RBP5.65□□□□□ -1.5
USF1-204ENST00000472217 ATP5L2Q7Z4Y8 100 aa5.65□□□□□ -1.5
USF1-204ENST00000472217 C5orf38Q86SI9 138 aa5.65□□□□□ -1.5
USF1-204ENST00000472217 PRELID3AQ96N28 172 aa5.65□□□□□ -1.5
USF1-204ENST00000472217 OPRPNQ99935 248 aaPredicted RBP5.65□□□□□ -1.5
USF1-204ENST00000472217 SPANXA1Q9NS26 97 aa5.65□□□□□ -1.5
USF1-204ENST00000472217 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.51
USF1-204ENST00000472217 LOC107984640A0A0U1RRK4 108 aa5.64□□□□□ -1.51
USF1-204ENST00000472217 MRPS36P82909 103 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms