RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 DEFB121Q5J5C9 76 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 BAALCQ8WXS3 180 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 CHCHD7Q9BUK0 85 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 TIMM21Q9BVV7 248 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 Q9UF83 564 aa4.27□□□□□ -1.73
SMNDC1-204ENST00000471297 IGHV3-38A0A0C4DH36 116 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 F8VRH5 84 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 K7EIL1 84 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 DEFB4AO15263 64 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 DPM2O94777 84 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 IGKCP01834 107 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 LINC00694P0DN24 101 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 PLNP26678 52 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 RPL39P62891 51 aaKnown RBP4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 KRTAP21-3Q3LHN1 58 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 SH2D6Q7Z4S9 175 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 ATP6V0E2Q8NHE4 81 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 SPANXA1Q9NS26 97 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 CELA1Q9UNI1 258 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 PAM16Q9Y3D7 125 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 CHTOPQ9Y3Y2 248 aaKnown RBP4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 ATRQ13535 2644 aa4.26□□□□□ -1.73
SMNDC1-204ENST00000471297 TRAV26-1A0A087WT03 109 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 LOC100131303A0A0U1RQF7 123 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 PCP4L1A6NKN8 68 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 F5H768 121 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 MRPS36P82909 103 aaKnown RBP4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 C12orf74Q32Q52 190 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 NTM-AS1Q6ZSK4 140 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 SBSPONQ8IVN8 264 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 ATOH7Q8N100 152 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 DEFB104AQ8WTQ1 72 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 TM2D3Q9BRN9 247 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 TMEM243Q9BU79 118 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 VCX2Q9H322 139 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 CST9LQ9H4G1 147 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 RETNQ9HD89 108 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 UBE2D4Q9Y2X8 147 aa4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 CSDC2Q9Y534 153 aaKnown RBP4.25□□□□□ -1.73
SMNDC1-204ENST00000471297 IGLV4-3A0A075B6K6 122 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 TRBV25-1A0A075B6N4 114 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 hDV102S1A0JD36 115 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 H3BNG1 76 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 UBE2L6O14933 153 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 ZNF25P17030 456 aaPredicted RBP4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 MRPL23Q16540 153 aaKnown RBP4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 MRPL52Q86TS9 123 aaKnown RBP4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 TMEM101Q96IK0 257 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 VSIG2Q96IQ7 327 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 AMELXQ99217 191 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 PMCHL2Q9BQD1 86 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 MIEN1Q9BRT3 115 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 PRO1933Q9H354 126 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 UQCR10Q9UDW1 63 aa4.24□□□□□ -1.73
SMNDC1-204ENST00000471297 NACAE9PAV3 2078 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 TRBV6-8A0A0A6YYG3 113 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 A0A0J9YWU9 116 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 IGKV2-29A2NJV5 120 aaPredicted RBP4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 PRB2P02812 416 aaPredicted RBP4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 IGLC3P0DOY3 106 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 MAJINQ3KP22 176 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 AMMECR1LQ6DCA0 310 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 NFE4Q86UQ8 179 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 C11orf45Q8TAV5 145 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 C2orf88Q9BSF0 95 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 NOTCH3Q9UM47 2321 aa4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 FBN1P35555 2871 aaKnown RBP4.23□□□□□ -1.73
SMNDC1-204ENST00000471297 A0A0J9YY99 117 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 COX8AP10176 69 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 FGF6P10767 208 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 HTN3P15516 51 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 DDTP30046 118 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 HERVK_113P61574 105 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 SEC11AP67812 179 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 ZC2HC1BQ5TFG8 222 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 STPG4Q8N801 248 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 OR5A1Q8NGJ0 315 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 MRAPQ8TCY5 172 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 NIPBLQ6KC79 2804 aaeCLIP4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
SMNDC1-204ENST00000471297 IGLV4-69A0A075B6H9 119 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 A0A1B0GUV1 79 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 TINCRA0A1B0GVN0 87 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 C11orf86A6NJI1 115 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 SIVA1O15304 175 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 DLEU1O43261 78 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 GAGE6Q13070 117 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 SLC25A34Q6PIV7 304 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 CEMP1Q6PRD7 247 aaPredicted RBP4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 FAM104AQ969W3 186 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 C14orf144Q96I85 54 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 CHCHD5Q9BSY4 110 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
SMNDC1-204ENST00000471297 DEFB131BA0A096LNP1 70 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms