RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
SPTLC1-204ENST00000469778 FA2HQ7L5A8 372 aa8.46□□□□□ -1.06
SPTLC1-204ENST00000469778 ZNF664Q8N3J9 261 aa8.46□□□□□ -1.06
SPTLC1-204ENST00000469778 C1orf43Q9BWL3 253 aa8.46□□□□□ -1.06
SPTLC1-204ENST00000469778 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.06
SPTLC1-204ENST00000469778 PRSS29PA6NIE9 313 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 EREGO14944 169 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 ATP6V1G1O75348 118 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 LINC00614P0C842 121 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 Q9HAA7 133 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
SPTLC1-204ENST00000469778 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
SPTLC1-204ENST00000469778 TRGC2P03986 189 aa8.43□□□□□ -1.06
SPTLC1-204ENST00000469778 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
SPTLC1-204ENST00000469778 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
SPTLC1-204ENST00000469778 C1orf196B1AJZ1 125 aa8.42□□□□□ -1.06
SPTLC1-204ENST00000469778 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
SPTLC1-204ENST00000469778 SS18Q15532 418 aa8.42□□□□□ -1.06
SPTLC1-204ENST00000469778 ERASQ7Z444 233 aa8.42□□□□□ -1.06
SPTLC1-204ENST00000469778 TOMM6Q96B49 74 aa8.42□□□□□ -1.06
SPTLC1-204ENST00000469778 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
SPTLC1-204ENST00000469778 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
SPTLC1-204ENST00000469778 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
SPTLC1-204ENST00000469778 SCO1O75880 301 aa8.41□□□□□ -1.06
SPTLC1-204ENST00000469778 Q6ZN92 141 aa8.41□□□□□ -1.06
SPTLC1-204ENST00000469778 A0A087WTM6 91 aa8.4□□□□□ -1.06
SPTLC1-204ENST00000469778 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.06
SPTLC1-204ENST00000469778 TNP2Q05952 138 aa8.4□□□□□ -1.06
SPTLC1-204ENST00000469778 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
SPTLC1-204ENST00000469778 BAGE3Q86Y29 109 aa8.4□□□□□ -1.06
SPTLC1-204ENST00000469778 VCX2Q9H322 139 aa8.4□□□□□ -1.06
SPTLC1-204ENST00000469778 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
SPTLC1-204ENST00000469778 LRCOL1A6NCL2 159 aa8.39□□□□□ -1.07
SPTLC1-204ENST00000469778 CFAP161Q6P656 301 aa8.39□□□□□ -1.07
SPTLC1-204ENST00000469778 SCGB3A1Q96QR1 104 aa8.39□□□□□ -1.07
SPTLC1-204ENST00000469778 HBDP02042 147 aa8.38□□□□□ -1.07
SPTLC1-204ENST00000469778 KRTAP26-1Q6PEX3 210 aa8.38□□□□□ -1.07
SPTLC1-204ENST00000469778 CLPSL2Q6UWE3 100 aa8.38□□□□□ -1.07
SPTLC1-204ENST00000469778 CD164L2Q6UWJ8 174 aa8.38□□□□□ -1.07
SPTLC1-204ENST00000469778 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
SPTLC1-204ENST00000469778 CHCHD10Q8WYQ3 142 aaPredicted RBP8.38□□□□□ -1.07
SPTLC1-204ENST00000469778 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
SPTLC1-204ENST00000469778 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
SPTLC1-204ENST00000469778 SEC11AP67812 179 aa8.37□□□□□ -1.07
SPTLC1-204ENST00000469778 CDPF1Q6NVV7 123 aa8.37□□□□□ -1.07
SPTLC1-204ENST00000469778 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
SPTLC1-204ENST00000469778 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
SPTLC1-204ENST00000469778 AMELXQ99217 191 aa8.37□□□□□ -1.07
SPTLC1-204ENST00000469778 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 IGKV3OR2-268A0A0C4DH90 116 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 HSBP1O75506 76 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 ATP5LO75964 103 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 Q6ZUT4 128 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 MAPKAPK5-AS1Q8N8E1 139 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 URB1-AS1Q96HZ7 61 aa8.36□□□□□ -1.07
SPTLC1-204ENST00000469778 FRAS1Q86XX4 4008 aa8.35□□□□□ -1.07
SPTLC1-204ENST00000469778 TRAV13-1A0A0B4J241 112 aa8.35□□□□□ -1.07
SPTLC1-204ENST00000469778 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
SPTLC1-204ENST00000469778 IFITM10A6NMD0 228 aa8.35□□□□□ -1.07
SPTLC1-204ENST00000469778 BAALCQ8WXS3 180 aa8.35□□□□□ -1.07
SPTLC1-204ENST00000469778 XCL1P47992 114 aa8.34□□□□□ -1.07
SPTLC1-204ENST00000469778 FOXI1Q12951 378 aa8.34□□□□□ -1.07
SPTLC1-204ENST00000469778 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
SPTLC1-204ENST00000469778 Q8N814 137 aa8.34□□□□□ -1.07
SPTLC1-204ENST00000469778 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
SPTLC1-204ENST00000469778 COX7A2LO14548 114 aa8.33□□□□□ -1.08
SPTLC1-204ENST00000469778 PMVKQ15126 192 aa8.33□□□□□ -1.08
SPTLC1-204ENST00000469778 PDZD11Q5EBL8 140 aa8.33□□□□□ -1.08
SPTLC1-204ENST00000469778 DNAH10Q8IVF4 4471 aa8.33□□□□□ -1.08
SPTLC1-204ENST00000469778 DNAH2Q9P225 4427 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 A0A096LNJ9 63 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 APOMO95445 188 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 UBE2D1P51668 147 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 RNASE13Q5GAN3 156 aaKnown RBP8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 CST9LQ9H4G1 147 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 DNAH17Q9UFH2 4485 aa8.32□□□□□ -1.08
SPTLC1-204ENST00000469778 IGHV3OR16-9A0A0B4J2B5 98 aa8.31□□□□□ -1.08
SPTLC1-204ENST00000469778 SERF1AO75920 110 aa8.31□□□□□ -1.08
SPTLC1-204ENST00000469778 MALP21145 153 aa8.31□□□□□ -1.08
SPTLC1-204ENST00000469778 HERVK_113P63121 156 aa8.31□□□□□ -1.08
SPTLC1-204ENST00000469778 COA6Q5JTJ3 125 aaKnown RBP8.31□□□□□ -1.08
SPTLC1-204ENST00000469778 SPATA12Q7Z6I5 190 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms