RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 BAGE3Q86Y29 109 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 ZNF664Q8N3J9 261 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 PYGO1Q9Y3Y4 419 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 TRAV8-4A0A0B4J246 113 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 PSCAO43653 123 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 LINC00336Q6ZUF6 198 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 C1orf43Q9BWL3 253 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 CDC42SE2Q9NRR3 84 aa15.43■□□□□ 0.06
SREBF1-208ENST00000469356 ENHOQ6UWT2 76 aa15.42■□□□□ 0.06
SREBF1-208ENST00000469356 CHCHD1Q96BP2 118 aaKnown RBP15.42■□□□□ 0.06
SREBF1-208ENST00000469356 IGKV2D-24A0A075B6R9 120 aa15.41■□□□□ 0.06
SREBF1-208ENST00000469356 NPSP0C0P6 89 aa15.41■□□□□ 0.06
SREBF1-208ENST00000469356 PAPPA-AS1Q5QFB9 102 aa15.41■□□□□ 0.06
SREBF1-208ENST00000469356 MRPS36P82909 103 aaKnown RBP15.4■□□□□ 0.06
SREBF1-208ENST00000469356 CLPSL2Q6UWE3 100 aa15.4■□□□□ 0.06
SREBF1-208ENST00000469356 TOMM6Q96B49 74 aa15.4■□□□□ 0.06
SREBF1-208ENST00000469356 Q6ZN92 141 aa15.39■□□□□ 0.05
SREBF1-208ENST00000469356 CCL25O15444 150 aa15.38■□□□□ 0.05
SREBF1-208ENST00000469356 IGKV3OR2-268A0A0C4DH90 116 aa15.37■□□□□ 0.05
SREBF1-208ENST00000469356 SS18Q15532 418 aa15.37■□□□□ 0.05
SREBF1-208ENST00000469356 C1orf196B1AJZ1 125 aa15.36■□□□□ 0.05
SREBF1-208ENST00000469356 RTL8CO15255 209 aa15.36■□□□□ 0.05
SREBF1-208ENST00000469356 HBDP02042 147 aa15.36■□□□□ 0.05
SREBF1-208ENST00000469356 ERASQ7Z444 233 aa15.36■□□□□ 0.05
SREBF1-208ENST00000469356 TMEM141Q96I45 108 aa15.36■□□□□ 0.05
SREBF1-208ENST00000469356 SCGB3A1Q96QR1 104 aa15.36■□□□□ 0.05
SREBF1-208ENST00000469356 TIMM17AQ99595 171 aa15.36■□□□□ 0.05
SREBF1-208ENST00000469356 HSBP1O75506 76 aa15.35■□□□□ 0.05
SREBF1-208ENST00000469356 Q6ZUT4 128 aa15.35■□□□□ 0.05
SREBF1-208ENST00000469356 URB1-AS1Q96HZ7 61 aa15.35■□□□□ 0.05
SREBF1-208ENST00000469356 EREGO14944 169 aa15.34■□□□□ 0.05
SREBF1-208ENST00000469356 Q6ZRN7 208 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-208ENST00000469356 PRSS29PA6NIE9 313 aa15.33■□□□□ 0.04
SREBF1-208ENST00000469356 TEX43Q6ZNM6 134 aa15.33■□□□□ 0.04
SREBF1-208ENST00000469356 C2orf88Q9BSF0 95 aa15.33■□□□□ 0.04
SREBF1-208ENST00000469356 VCX2Q9H322 139 aa15.33■□□□□ 0.04
SREBF1-208ENST00000469356 IGLV4-3A0A075B6K6 122 aa15.32■□□□□ 0.04
SREBF1-208ENST00000469356 LINC00959A0A1B0GUT2 108 aa15.32■□□□□ 0.04
SREBF1-208ENST00000469356 IGIPA6NJ69 53 aa15.32■□□□□ 0.04
SREBF1-208ENST00000469356 IGLV10-54A0A075B6I4 117 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BKO60814 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BJP06899 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BOP23527 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BBP33778 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BDP58876 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BCP62807 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST2H2BEQ16778 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BHQ93079 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BNQ99877 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 HIST1H2BMQ99879 126 aa15.31■□□□□ 0.04
SREBF1-208ENST00000469356 IFITM10A6NMD0 228 aa15.3■□□□□ 0.04
SREBF1-208ENST00000469356 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-208ENST00000469356 RNASE13Q5GAN3 156 aaKnown RBP15.3■□□□□ 0.04
SREBF1-208ENST00000469356 ATP5LO75964 103 aa15.29■□□□□ 0.04
SREBF1-208ENST00000469356 CHCHD10Q8WYQ3 142 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-208ENST00000469356 OPRPNQ99935 248 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-208ENST00000469356 RYR3Q15413 4870 aa15.28■□□□□ 0.04
SREBF1-208ENST00000469356 TRAV13-1A0A0B4J241 112 aa15.28■□□□□ 0.04
SREBF1-208ENST00000469356 SERF1AO75920 110 aa15.28■□□□□ 0.04
SREBF1-208ENST00000469356 TNP2Q05952 138 aa15.26■□□□□ 0.03
SREBF1-208ENST00000469356 PMCHL1Q16048 86 aa15.26■□□□□ 0.03
SREBF1-208ENST00000469356 AMELXQ99217 191 aa15.26■□□□□ 0.03
SREBF1-208ENST00000469356 GAGE12HA6NDE8 117 aa15.25■□□□□ 0.03
SREBF1-208ENST00000469356 C14orf177Q52M58 125 aa15.25■□□□□ 0.03
SREBF1-208ENST00000469356 PDZD11Q5EBL8 140 aa15.25■□□□□ 0.03
SREBF1-208ENST00000469356 CD164L2Q6UWJ8 174 aa15.25■□□□□ 0.03
SREBF1-208ENST00000469356 A0A096LNJ9 63 aa15.24■□□□□ 0.03
SREBF1-208ENST00000469356 XCL1P47992 114 aa15.24■□□□□ 0.03
SREBF1-208ENST00000469356 SEC11AP67812 179 aa15.24■□□□□ 0.03
SREBF1-208ENST00000469356 FAM104AQ969W3 186 aa15.24■□□□□ 0.03
SREBF1-208ENST00000469356 FRAS1Q86XX4 4008 aa15.23■□□□□ 0.03
SREBF1-208ENST00000469356 DNAH2Q9P225 4427 aa15.23■□□□□ 0.03
SREBF1-208ENST00000469356 CFAP161Q6P656 301 aa15.23■□□□□ 0.03
SREBF1-208ENST00000469356 DNAH10Q8IVF4 4471 aa15.23■□□□□ 0.03
SREBF1-208ENST00000469356 A0A087WTM6 91 aa15.22■□□□□ 0.03
SREBF1-208ENST00000469356 PMVKQ15126 192 aa15.22■□□□□ 0.03
SREBF1-208ENST00000469356 KRTAP26-1Q6PEX3 210 aa15.22■□□□□ 0.03
SREBF1-208ENST00000469356 BAALCQ8WXS3 180 aa15.22■□□□□ 0.03
SREBF1-208ENST00000469356 FAM19A2Q8N3H0 131 aa15.21■□□□□ 0.03
SREBF1-208ENST00000469356 LEPROTL1O95214 131 aa15.2■□□□□ 0.02
SREBF1-208ENST00000469356 DNAH17Q9UFH2 4485 aa15.19■□□□□ 0.02
SREBF1-208ENST00000469356 LRCOL1A6NCL2 159 aa15.19■□□□□ 0.02
SREBF1-208ENST00000469356 UBE2D1P51668 147 aa15.19■□□□□ 0.02
SREBF1-208ENST00000469356 NDUFA6P56556 154 aa15.19■□□□□ 0.02
SREBF1-208ENST00000469356 MAPKAPK5-AS1Q8N8E1 139 aa15.19■□□□□ 0.02
SREBF1-208ENST00000469356 HSPB8Q9UJY1 196 aa15.19■□□□□ 0.02
SREBF1-208ENST00000469356 PRSS1P07477 247 aa15.18■□□□□ 0.02
SREBF1-208ENST00000469356 LINC00310P59036 64 aa15.18■□□□□ 0.02
SREBF1-208ENST00000469356 FOXI1Q12951 378 aa15.18■□□□□ 0.02
SREBF1-208ENST00000469356 COA6Q5JTJ3 125 aaKnown RBP15.18■□□□□ 0.02
SREBF1-208ENST00000469356 LINC00173Q6ZV60 143 aa15.18■□□□□ 0.02
SREBF1-208ENST00000469356 IFI27L1Q96BM0 104 aa15.18■□□□□ 0.02
SREBF1-208ENST00000469356 COX7A2LO14548 114 aa15.17■□□□□ 0.02
SREBF1-208ENST00000469356 MALP21145 153 aa15.17■□□□□ 0.02
SREBF1-208ENST00000469356 CST9LQ9H4G1 147 aa15.17■□□□□ 0.02
SREBF1-208ENST00000469356 USP17L23D6RBM5 183 aa15.17■□□□□ 0.02
SREBF1-208ENST00000469356 APOMO95445 188 aa15.17■□□□□ 0.02
SREBF1-208ENST00000469356 HERVK_113P63121 156 aa15.17■□□□□ 0.02
SREBF1-208ENST00000469356 ZC2HC1BQ5TFG8 222 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms