RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 SERF1AO75920 110 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 S100A6P06703 90 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 GAGE1Q13065 139 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 GAGE4Q13068 117 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 GAGE5Q13069 117 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 GAGE13Q4V321 117 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 C5orf52A6NGY3 159 aa10.52□□□□□ -0.73
TSSC4-208ENST00000467308 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
TSSC4-208ENST00000467308 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.73
TSSC4-208ENST00000467308 TMA7Q9Y2S6 64 aaKnown RBP10.52□□□□□ -0.73
TSSC4-208ENST00000467308 PSCAO43653 123 aa10.51□□□□□ -0.73
TSSC4-208ENST00000467308 TSHBP01222 138 aa10.51□□□□□ -0.73
TSSC4-208ENST00000467308 LAGE3Q14657 143 aa10.51□□□□□ -0.73
TSSC4-208ENST00000467308 ORMDL2Q53FV1 153 aa10.51□□□□□ -0.73
TSSC4-208ENST00000467308 RNASEKQ6P5S7 137 aaKnown RBP10.51□□□□□ -0.73
TSSC4-208ENST00000467308 PACRGQ96M98 296 aaPredicted RBP10.51□□□□□ -0.73
TSSC4-208ENST00000467308 G0S2P27469 103 aa10.5□□□□□ -0.73
TSSC4-208ENST00000467308 TIRAPP58753 221 aa10.5□□□□□ -0.73
TSSC4-208ENST00000467308 COTL1Q14019 142 aa10.5□□□□□ -0.73
TSSC4-208ENST00000467308 Q8N814 137 aa10.5□□□□□ -0.73
TSSC4-208ENST00000467308 ATP6V0E2Q8NHE4 81 aa10.5□□□□□ -0.73
TSSC4-208ENST00000467308 IGHV3-38A0A0C4DH36 116 aa10.49□□□□□ -0.73
TSSC4-208ENST00000467308 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
TSSC4-208ENST00000467308 KRTAP29-1A8MX34 341 aaPredicted RBP10.49□□□□□ -0.73
TSSC4-208ENST00000467308 NUPR1O60356 82 aa10.49□□□□□ -0.73
TSSC4-208ENST00000467308 HSBP1O75506 76 aa10.49□□□□□ -0.73
TSSC4-208ENST00000467308 FCER1GP30273 86 aa10.49□□□□□ -0.73
TSSC4-208ENST00000467308 DNAH8Q96JB1 4490 aa10.48□□□□□ -0.73
TSSC4-208ENST00000467308 PLA2G1BP04054 148 aaKnown RBP10.48□□□□□ -0.73
TSSC4-208ENST00000467308 LINC01556Q5JQF7 62 aa10.48□□□□□ -0.73
TSSC4-208ENST00000467308 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
TSSC4-208ENST00000467308 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
TSSC4-208ENST00000467308 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
TSSC4-208ENST00000467308 HIST3H2BBQ8N257 126 aa10.47□□□□□ -0.73
TSSC4-208ENST00000467308 A0A096LNJ9 63 aa10.46□□□□□ -0.73
TSSC4-208ENST00000467308 TRBV6-8A0A0A6YYG3 113 aa10.46□□□□□ -0.73
TSSC4-208ENST00000467308 IGHV1-24A0A0C4DH33 117 aa10.46□□□□□ -0.73
TSSC4-208ENST00000467308 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
TSSC4-208ENST00000467308 H7C423 109 aa10.45□□□□□ -0.74
TSSC4-208ENST00000467308 HBDP02042 147 aa10.45□□□□□ -0.74
TSSC4-208ENST00000467308 C20orf203Q8NBC4 194 aa10.45□□□□□ -0.74
TSSC4-208ENST00000467308 DEFB104AQ8WTQ1 72 aa10.45□□□□□ -0.74
TSSC4-208ENST00000467308 TOMM6Q96B49 74 aa10.45□□□□□ -0.74
TSSC4-208ENST00000467308 CHCHD7Q9BUK0 85 aa10.45□□□□□ -0.74
TSSC4-208ENST00000467308 PDZD11Q5EBL8 140 aa10.44□□□□□ -0.74
TSSC4-208ENST00000467308 Q6ZSA8 131 aa10.44□□□□□ -0.74
TSSC4-208ENST00000467308 TMEM18Q96B42 140 aa10.44□□□□□ -0.74
TSSC4-208ENST00000467308 TRBV25-1A0A075B6N4 114 aa10.43□□□□□ -0.74
TSSC4-208ENST00000467308 TRAV8-6A0A0B4J262 113 aa10.43□□□□□ -0.74
TSSC4-208ENST00000467308 AMTP48728 403 aa10.43□□□□□ -0.74
TSSC4-208ENST00000467308 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
TSSC4-208ENST00000467308 FAM19A2Q8N3H0 131 aa10.43□□□□□ -0.74
TSSC4-208ENST00000467308 Q9HAA7 133 aa10.43□□□□□ -0.74
TSSC4-208ENST00000467308 CYSLTR1Q9Y271 337 aa10.43□□□□□ -0.74
TSSC4-208ENST00000467308 NPSP0C0P6 89 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 S100A2P29034 98 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 LELP1Q5T871 98 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 C2orf66Q6UXQ4 117 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 HIST1H2BLQ99880 126 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 TMEM243Q9BU79 118 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 TIMM21Q9BVV7 248 aa10.42□□□□□ -0.74
TSSC4-208ENST00000467308 IFITM10A6NMD0 228 aa10.41□□□□□ -0.74
TSSC4-208ENST00000467308 SMAGPQ0VAQ4 97 aa10.41□□□□□ -0.74
TSSC4-208ENST00000467308 MRPL52Q86TS9 123 aaKnown RBP10.41□□□□□ -0.74
TSSC4-208ENST00000467308 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
TSSC4-208ENST00000467308 PKIAP61925 76 aa10.4□□□□□ -0.74
TSSC4-208ENST00000467308 ERASQ7Z444 233 aa10.4□□□□□ -0.74
TSSC4-208ENST00000467308 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
TSSC4-208ENST00000467308 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.74
TSSC4-208ENST00000467308 HSPB8Q9UJY1 196 aa10.4□□□□□ -0.74
TSSC4-208ENST00000467308 CSDC2Q9Y534 153 aaKnown RBP10.4□□□□□ -0.74
TSSC4-208ENST00000467308 IGIPA6NJ69 53 aa10.39□□□□□ -0.75
TSSC4-208ENST00000467308 ATP5LO75964 103 aa10.39□□□□□ -0.75
TSSC4-208ENST00000467308 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
TSSC4-208ENST00000467308 TMEM141Q96I45 108 aa10.39□□□□□ -0.75
TSSC4-208ENST00000467308 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
TSSC4-208ENST00000467308 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
TSSC4-208ENST00000467308 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
TSSC4-208ENST00000467308 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
TSSC4-208ENST00000467308 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
TSSC4-208ENST00000467308 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
TSSC4-208ENST00000467308 RPL39P62891 51 aaKnown RBP10.38□□□□□ -0.75
TSSC4-208ENST00000467308 UBE2D4Q9Y2X8 147 aa10.38□□□□□ -0.75
TSSC4-208ENST00000467308 HMCN2Q8NDA2 5059 aa10.38□□□□□ -0.75
TSSC4-208ENST00000467308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
TSSC4-208ENST00000467308 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
TSSC4-208ENST00000467308 FABP4P15090 132 aa10.37□□□□□ -0.75
TSSC4-208ENST00000467308 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
TSSC4-208ENST00000467308 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
TSSC4-208ENST00000467308 LRP1Q07954 4544 aaKnown RBP10.37□□□□□ -0.75
TSSC4-208ENST00000467308 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
TSSC4-208ENST00000467308 UBE2L6O14933 153 aa10.36□□□□□ -0.75
TSSC4-208ENST00000467308 WFDC2Q14508 124 aa10.36□□□□□ -0.75
TSSC4-208ENST00000467308 CHCHD5Q9BSY4 110 aa10.36□□□□□ -0.75
TSSC4-208ENST00000467308 TRAV8-3A0A0A6YYJ7 113 aa10.35□□□□□ -0.75
TSSC4-208ENST00000467308 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
TSSC4-208ENST00000467308 FGF6P10767 208 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 616.2 ms