RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 IMMP2LQ96T52 175 aa8.43□□□□□ -1.06
COL5A1-206ENST00000465877 CTDSP1Q9GZU7 261 aa8.43□□□□□ -1.06
COL5A1-206ENST00000465877 TCAPO15273 167 aa8.42□□□□□ -1.06
COL5A1-206ENST00000465877 HAMPP81172 84 aa8.42□□□□□ -1.06
COL5A1-206ENST00000465877 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
COL5A1-206ENST00000465877 PRELID3AQ96N28 172 aa8.42□□□□□ -1.06
COL5A1-206ENST00000465877 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
COL5A1-206ENST00000465877 PRSS1P07477 247 aa8.41□□□□□ -1.06
COL5A1-206ENST00000465877 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
COL5A1-206ENST00000465877 C10orf91Q5T1B1 145 aa8.41□□□□□ -1.06
COL5A1-206ENST00000465877 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
COL5A1-206ENST00000465877 Q8N1X5 172 aa8.41□□□□□ -1.06
COL5A1-206ENST00000465877 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
COL5A1-206ENST00000465877 CARHSP1Q9Y2V2 147 aaKnown RBP8.41□□□□□ -1.06
COL5A1-206ENST00000465877 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
COL5A1-206ENST00000465877 TRAV9-1A0A075B6T8 112 aa8.4□□□□□ -1.06
COL5A1-206ENST00000465877 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.06
COL5A1-206ENST00000465877 Q6ZSA8 131 aa8.4□□□□□ -1.06
COL5A1-206ENST00000465877 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
COL5A1-206ENST00000465877 CDC42SE2Q9NRR3 84 aa8.4□□□□□ -1.06
COL5A1-206ENST00000465877 LAMTOR2Q9Y2Q5 125 aa8.4□□□□□ -1.06
COL5A1-206ENST00000465877 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
COL5A1-206ENST00000465877 RHEBQ15382 184 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 DGAT2L7PQ6IED9 249 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 Q6ZUT4 128 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 ZNF664Q8N3J9 261 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 TMEM18Q96B42 140 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 MAP1LC3AQ9H492 121 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 FAM30AQ9NZY2 134 aa8.39□□□□□ -1.07
COL5A1-206ENST00000465877 CSDC2Q9Y534 153 aaKnown RBP8.39□□□□□ -1.07
COL5A1-206ENST00000465877 LINC00959A0A1B0GUT2 108 aa8.38□□□□□ -1.07
COL5A1-206ENST00000465877 hDV102S1A0JD36 115 aa8.38□□□□□ -1.07
COL5A1-206ENST00000465877 S100PP25815 95 aa8.38□□□□□ -1.07
COL5A1-206ENST00000465877 XCL1P47992 114 aa8.38□□□□□ -1.07
COL5A1-206ENST00000465877 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
COL5A1-206ENST00000465877 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
COL5A1-206ENST00000465877 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
COL5A1-206ENST00000465877 CCL25O15444 150 aa8.37□□□□□ -1.07
COL5A1-206ENST00000465877 FOXI1Q12951 378 aa8.37□□□□□ -1.07
COL5A1-206ENST00000465877 LOC389332A0A1B0GUA5 103 aa8.36□□□□□ -1.07
COL5A1-206ENST00000465877 CNBPP62633 177 aaKnown RBP8.36□□□□□ -1.07
COL5A1-206ENST00000465877 SS18Q15532 418 aa8.36□□□□□ -1.07
COL5A1-206ENST00000465877 RPS10P5Q9NQ39 176 aa8.36□□□□□ -1.07
COL5A1-206ENST00000465877 PRSS47A8MTI9 375 aa8.35□□□□□ -1.07
COL5A1-206ENST00000465877 RAB5AP20339 215 aa8.35□□□□□ -1.07
COL5A1-206ENST00000465877 Q5VSD8 79 aa8.35□□□□□ -1.07
COL5A1-206ENST00000465877 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
COL5A1-206ENST00000465877 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
COL5A1-206ENST00000465877 AP5S1Q9NUS5 200 aa8.35□□□□□ -1.07
COL5A1-206ENST00000465877 GVQW2A0A096LPI5 108 aaPredicted RBP8.34□□□□□ -1.07
COL5A1-206ENST00000465877 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.07
COL5A1-206ENST00000465877 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
COL5A1-206ENST00000465877 CD164L2Q6UWJ8 174 aa8.34□□□□□ -1.07
COL5A1-206ENST00000465877 SCXQ7RTU7 201 aa8.34□□□□□ -1.07
COL5A1-206ENST00000465877 Q8N8P6 123 aa8.34□□□□□ -1.07
COL5A1-206ENST00000465877 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.33□□□□□ -1.08
COL5A1-206ENST00000465877 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
COL5A1-206ENST00000465877 EPM2AB3EWF7 344 aa8.33□□□□□ -1.08
COL5A1-206ENST00000465877 APOC3P02656 99 aa8.33□□□□□ -1.08
COL5A1-206ENST00000465877 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
COL5A1-206ENST00000465877 IFI27P40305 119 aaPredicted RBP8.33□□□□□ -1.08
COL5A1-206ENST00000465877 NDUFA5Q16718 116 aa8.33□□□□□ -1.08
COL5A1-206ENST00000465877 FAM104AQ969W3 186 aa8.33□□□□□ -1.08
COL5A1-206ENST00000465877 GNB1LQ9BYB4 327 aa8.33□□□□□ -1.08
COL5A1-206ENST00000465877 C1orf196B1AJZ1 125 aa8.32□□□□□ -1.08
COL5A1-206ENST00000465877 SNAPINO95295 136 aa8.32□□□□□ -1.08
COL5A1-206ENST00000465877 MT-ND6P03923 174 aa8.32□□□□□ -1.08
COL5A1-206ENST00000465877 SLPIP03973 132 aa8.32□□□□□ -1.08
COL5A1-206ENST00000465877 MRPS36P82909 103 aaKnown RBP8.32□□□□□ -1.08
COL5A1-206ENST00000465877 KIAA1644Q3SXP7 199 aa8.32□□□□□ -1.08
COL5A1-206ENST00000465877 SVBPQ8N300 66 aa8.32□□□□□ -1.08
COL5A1-206ENST00000465877 NXT2Q9NPJ8 142 aaKnown RBP8.32□□□□□ -1.08
COL5A1-206ENST00000465877 SRRM2Q9UQ35 2752 aaKnown RBP8.31□□□□□ -1.08
COL5A1-206ENST00000465877 IGHV1-58A0A0C4DH39 117 aa8.31□□□□□ -1.08
COL5A1-206ENST00000465877 K7EMI3 77 aa8.31□□□□□ -1.08
COL5A1-206ENST00000465877 COX19Q49B96 90 aa8.31□□□□□ -1.08
COL5A1-206ENST00000465877 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
COL5A1-206ENST00000465877 OPRPNQ99935 248 aaPredicted RBP8.31□□□□□ -1.08
COL5A1-206ENST00000465877 CHAC1Q9BUX1 264 aa8.31□□□□□ -1.08
COL5A1-206ENST00000465877 CYSLTR1Q9Y271 337 aa8.31□□□□□ -1.08
COL5A1-206ENST00000465877 MYCBP2O75592 4640 aa8.3□□□□□ -1.08
COL5A1-206ENST00000465877 IGLV4-3A0A075B6K6 122 aa8.3□□□□□ -1.08
COL5A1-206ENST00000465877 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
COL5A1-206ENST00000465877 IFITM10A6NMD0 228 aa8.3□□□□□ -1.08
COL5A1-206ENST00000465877 C2orf66Q6UXQ4 117 aa8.3□□□□□ -1.08
COL5A1-206ENST00000465877 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
COL5A1-206ENST00000465877 PYGO1Q9Y3Y4 419 aa8.3□□□□□ -1.08
COL5A1-206ENST00000465877 COX7A2LO14548 114 aa8.29□□□□□ -1.08
COL5A1-206ENST00000465877 TMEM141Q96I45 108 aa8.29□□□□□ -1.08
COL5A1-206ENST00000465877 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
COL5A1-206ENST00000465877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
COL5A1-206ENST00000465877 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
COL5A1-206ENST00000465877 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
COL5A1-206ENST00000465877 PANO1I0J062 215 aa8.28□□□□□ -1.08
COL5A1-206ENST00000465877 MALP21145 153 aa8.28□□□□□ -1.08
COL5A1-206ENST00000465877 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
COL5A1-206ENST00000465877 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
COL5A1-206ENST00000465877 ALKBH7Q9BT30 221 aaPredicted RBP8.28□□□□□ -1.08
COL5A1-206ENST00000465877 TEX43Q6ZNM6 134 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms