RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CARD19Q96LW7 228 aa14.22□□□□□ -0.13
USP42-205ENST00000465073 MRPL52Q86TS9 123 aaKnown RBP14.21□□□□□ -0.13
USP42-205ENST00000465073 LINC00526Q96FQ7 95 aa14.21□□□□□ -0.13
USP42-205ENST00000465073 TMEM242Q9NWH2 141 aa14.21□□□□□ -0.13
USP42-205ENST00000465073 CD164L2Q6UWJ8 174 aa14.2□□□□□ -0.14
USP42-205ENST00000465073 CDC42SE2Q9NRR3 84 aa14.2□□□□□ -0.14
USP42-205ENST00000465073 ZNF561-AS1K7EIQ3 104 aa14.19□□□□□ -0.14
USP42-205ENST00000465073 GAS8-AS1O95177 125 aa14.19□□□□□ -0.14
USP42-205ENST00000465073 BLOC1S1P78537 153 aa14.19□□□□□ -0.14
USP42-205ENST00000465073 SPINK6Q6UWN8 80 aa14.19□□□□□ -0.14
USP42-205ENST00000465073 TRBV27A0A0K0K1C4 114 aa14.18□□□□□ -0.14
USP42-205ENST00000465073 POLR2KP53803 58 aaKnown RBP14.18□□□□□ -0.14
USP42-205ENST00000465073 SYCNQ0VAF6 134 aa14.18□□□□□ -0.14
USP42-205ENST00000465073 ZNF664Q8N3J9 261 aa14.18□□□□□ -0.14
USP42-205ENST00000465073 TMEM191AQ9H0A3 160 aa14.18□□□□□ -0.14
USP42-205ENST00000465073 A0A0J9YXV3 536 aa14.18□□□□□ -0.14
USP42-205ENST00000465073 A0A1B0GUT8 65 aa14.18□□□□□ -0.14
USP42-205ENST00000465073 REG3GQ6UW15 175 aa14.18□□□□□ -0.14
USP42-205ENST00000465073 TNXBP22105 4242 aa14.17□□□□□ -0.14
USP42-205ENST00000465073 C7orf77A4D0Y5 90 aa14.16□□□□□ -0.14
USP42-205ENST00000465073 CEBPGP53567 150 aa14.16□□□□□ -0.14
USP42-205ENST00000465073 Q6ZRP5 223 aa14.16□□□□□ -0.14
USP42-205ENST00000465073 TSKUQ8WUA8 353 aa14.16□□□□□ -0.14
USP42-205ENST00000465073 HIGD1CA8MV81 97 aa14.15□□□□□ -0.14
USP42-205ENST00000465073 RAB4AP20338 218 aa14.15□□□□□ -0.14
USP42-205ENST00000465073 LRP2P98164 4655 aa14.14□□□□□ -0.15
USP42-205ENST00000465073 CAMPP49913 170 aa14.14□□□□□ -0.15
USP42-205ENST00000465073 KRTAP10-8P60410 259 aa14.14□□□□□ -0.15
USP42-205ENST00000465073 SRSF9Q13242 221 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP42-205ENST00000465073 ISOC2Q96AB3 205 aa14.14□□□□□ -0.15
USP42-205ENST00000465073 C1orf196B1AJZ1 125 aa14.13□□□□□ -0.15
USP42-205ENST00000465073 PTTG1IPP53801 180 aa14.13□□□□□ -0.15
USP42-205ENST00000465073 ALKAL2Q6UX46 152 aa14.13□□□□□ -0.15
USP42-205ENST00000465073 VCYO14598 125 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 LINC01551Q86U37 167 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 SMIM7Q9BQ49 75 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 LOC107984640A0A0U1RRK4 108 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 MALP21145 153 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 SMAGPQ0VAQ4 97 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 AMN1Q8IY45 258 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 OSTCQ9NRP0 149 aa14.12□□□□□ -0.15
USP42-205ENST00000465073 CSDC2Q9Y534 153 aaKnown RBP14.12□□□□□ -0.15
USP42-205ENST00000465073 IGLV4-69A0A075B6H9 119 aa14.11□□□□□ -0.15
USP42-205ENST00000465073 COX7A2LO14548 114 aa14.11□□□□□ -0.15
USP42-205ENST00000465073 PPP1R17O96001 155 aa14.11□□□□□ -0.15
USP42-205ENST00000465073 FCER1GP30273 86 aa14.11□□□□□ -0.15
USP42-205ENST00000465073 ODF1Q14990 250 aa14.1□□□□□ -0.15
USP42-205ENST00000465073 EIF5A2Q9GZV4 153 aaKnown RBP14.1□□□□□ -0.15
USP42-205ENST00000465073 GAGE2BQ13066 116 aa14.09□□□□□ -0.15
USP42-205ENST00000465073 RIGQ13278 110 aa14.08□□□□□ -0.16
USP42-205ENST00000465073 ZNF727A8MUV8 499 aa14.07□□□□□ -0.16
USP42-205ENST00000465073 NUP35Q8NFH5 326 aa14.07□□□□□ -0.16
USP42-205ENST00000465073 UBE2D4Q9Y2X8 147 aa14.07□□□□□ -0.16
USP42-205ENST00000465073 SMKR1H3BMG3 65 aa14.06□□□□□ -0.16
USP42-205ENST00000465073 SUMO2P61956 95 aaKnown RBP14.06□□□□□ -0.16
USP42-205ENST00000465073 CAMK2N2Q96S95 79 aa14.06□□□□□ -0.16
USP42-205ENST00000465073 KIR2DL4Q99706 377 aa14.06□□□□□ -0.16
USP42-205ENST00000465073 APOMO95445 188 aa14.06□□□□□ -0.16
USP42-205ENST00000465073 NRACQ8N912 160 aa14.06□□□□□ -0.16
USP42-205ENST00000465073 C2orf48Q96LS8 159 aa14.06□□□□□ -0.16
USP42-205ENST00000465073 TRAV13-1A0A0B4J241 112 aa14.05□□□□□ -0.16
USP42-205ENST00000465073 A0A1W2PNN7 141 aa14.05□□□□□ -0.16
USP42-205ENST00000465073 V9GYV3 84 aa14.05□□□□□ -0.16
USP42-205ENST00000465073 RNF213Q63HN8 5207 aa14.04□□□□□ -0.16
USP42-205ENST00000465073 PPP1R2P9O14990 202 aa14.04□□□□□ -0.16
USP42-205ENST00000465073 RNASE13Q5GAN3 156 aaKnown RBP14.04□□□□□ -0.16
USP42-205ENST00000465073 AKAP14Q86UN6 197 aa14.04□□□□□ -0.16
USP42-205ENST00000465073 TMEM18Q96B42 140 aa14.03□□□□□ -0.16
USP42-205ENST00000465073 TIMM21Q9BVV7 248 aa14.03□□□□□ -0.16
USP42-205ENST00000465073 SRP19P09132 144 aaKnown RBP14.02□□□□□ -0.16
USP42-205ENST00000465073 C5orf38Q86SI9 138 aa14.02□□□□□ -0.16
USP42-205ENST00000465073 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.01□□□□□ -0.17
USP42-205ENST00000465073 C9orf116Q5BN46 136 aaPredicted RBP14.01□□□□□ -0.17
USP42-205ENST00000465073 RNF151Q2KHN1 245 aa14□□□□□ -0.17
USP42-205ENST00000465073 Q6ZUT4 128 aa14□□□□□ -0.17
USP42-205ENST00000465073 NAT8BQ9UHF3 227 aa14□□□□□ -0.17
USP42-205ENST00000465073 MT-ND6P03923 174 aa13.99□□□□□ -0.17
USP42-205ENST00000465073 FAM104BQ5XKR9 115 aa13.99□□□□□ -0.17
USP42-205ENST00000465073 PSORS1C2Q9UIG4 136 aa13.99□□□□□ -0.17
USP42-205ENST00000465073 LINC00862A6NCI5 91 aa13.99□□□□□ -0.17
USP42-205ENST00000465073 RPL18AQ02543 176 aaKnown RBP13.99□□□□□ -0.17
USP42-205ENST00000465073 SPAG11BQ08648 103 aa13.99□□□□□ -0.17
USP42-205ENST00000465073 TMEM241Q24JQ0 296 aa13.99□□□□□ -0.17
USP42-205ENST00000465073 MRPL51Q4U2R6 128 aaKnown RBP13.99□□□□□ -0.17
USP42-205ENST00000465073 C20orf78Q9BR46 151 aa13.99□□□□□ -0.17
USP42-205ENST00000465073 OR10D4PQ8NGN7 298 aa13.98□□□□□ -0.17
USP42-205ENST00000465073 TCAPO15273 167 aa13.97□□□□□ -0.17
USP42-205ENST00000465073 FAM74A3Q4VXF1 159 aa13.97□□□□□ -0.17
USP42-205ENST00000465073 OPRPNQ99935 248 aaPredicted RBP13.97□□□□□ -0.17
USP42-205ENST00000465073 TRBV24-1A0A075B6N3 115 aa13.96□□□□□ -0.17
USP42-205ENST00000465073 F8WDY8 70 aa13.96□□□□□ -0.17
USP42-205ENST00000465073 RPL32P62910 135 aaKnown RBP13.96□□□□□ -0.17
USP42-205ENST00000465073 SMIM27A0A1W2PRY6 76 aa13.94□□□□□ -0.18
USP42-205ENST00000465073 CKS2P33552 79 aa13.94□□□□□ -0.18
USP42-205ENST00000465073 RPL23P62829 140 aaKnown RBP13.94□□□□□ -0.18
USP42-205ENST00000465073 PHF5AQ7RTV0 110 aaKnown RBP13.94□□□□□ -0.18
USP42-205ENST00000465073 A0A1B0GW15 77 aa13.93□□□□□ -0.18
USP42-205ENST00000465073 C1orf137Q5JT78 98 aa13.93□□□□□ -0.18
USP42-205ENST00000465073 MRPL35Q9NZE8 188 aaKnown RBP13.93□□□□□ -0.18
USP42-205ENST00000465073 RPL39P62891 51 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms