RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 BTF3L4Q96K17 158 aa8.98□□□□□ -0.97
MCF2L-220ENST00000464800 LINC00959A0A1B0GUT2 108 aa8.97□□□□□ -0.97
MCF2L-220ENST00000464800 I3L3M4 83 aa8.97□□□□□ -0.97
MCF2L-220ENST00000464800 PMCHP20382 165 aa8.97□□□□□ -0.97
MCF2L-220ENST00000464800 SLC51BQ86UW2 128 aa8.97□□□□□ -0.97
MCF2L-220ENST00000464800 ZNF664Q8N3J9 261 aa8.97□□□□□ -0.97
MCF2L-220ENST00000464800 TMEM101Q96IK0 257 aa8.97□□□□□ -0.97
MCF2L-220ENST00000464800 LOC107984640A0A0U1RRK4 108 aa8.96□□□□□ -0.98
MCF2L-220ENST00000464800 MT-ND6P03923 174 aa8.96□□□□□ -0.98
MCF2L-220ENST00000464800 GAGE2BQ13066 116 aa8.96□□□□□ -0.98
MCF2L-220ENST00000464800 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
MCF2L-220ENST00000464800 GATCO43716 136 aaKnown RBP8.95□□□□□ -0.98
MCF2L-220ENST00000464800 CAMPP49913 170 aa8.95□□□□□ -0.98
MCF2L-220ENST00000464800 SS18Q15532 418 aa8.95□□□□□ -0.98
MCF2L-220ENST00000464800 ISOC2Q96AB3 205 aa8.95□□□□□ -0.98
MCF2L-220ENST00000464800 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
MCF2L-220ENST00000464800 A8MWL6 223 aa8.94□□□□□ -0.98
MCF2L-220ENST00000464800 ESDP10768 282 aa8.94□□□□□ -0.98
MCF2L-220ENST00000464800 CD164L2Q6UWJ8 174 aa8.94□□□□□ -0.98
MCF2L-220ENST00000464800 LPAP08519 4548 aa8.93□□□□□ -0.98
MCF2L-220ENST00000464800 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
MCF2L-220ENST00000464800 TSHBP01222 138 aa8.93□□□□□ -0.98
MCF2L-220ENST00000464800 FAM231DQ6ZW35 169 aa8.93□□□□□ -0.98
MCF2L-220ENST00000464800 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
MCF2L-220ENST00000464800 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
MCF2L-220ENST00000464800 C1orf137Q5JT78 98 aa8.92□□□□□ -0.98
MCF2L-220ENST00000464800 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
MCF2L-220ENST00000464800 CDC42SE2Q9NRR3 84 aa8.92□□□□□ -0.98
MCF2L-220ENST00000464800 TMEM242Q9NWH2 141 aa8.92□□□□□ -0.98
MCF2L-220ENST00000464800 IGLV4-69A0A075B6H9 119 aa8.91□□□□□ -0.98
MCF2L-220ENST00000464800 APOMO95445 188 aa8.91□□□□□ -0.98
MCF2L-220ENST00000464800 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
MCF2L-220ENST00000464800 CT83Q5H943 113 aa8.91□□□□□ -0.98
MCF2L-220ENST00000464800 PRR26Q8N8Z3 221 aa8.91□□□□□ -0.98
MCF2L-220ENST00000464800 BORCS7Q96B45 105 aa8.91□□□□□ -0.98
MCF2L-220ENST00000464800 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
MCF2L-220ENST00000464800 MALP21145 153 aa8.9□□□□□ -0.98
MCF2L-220ENST00000464800 POLR2KP53803 58 aaKnown RBP8.9□□□□□ -0.98
MCF2L-220ENST00000464800 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.98
MCF2L-220ENST00000464800 MRPL52Q86TS9 123 aaKnown RBP8.9□□□□□ -0.98
MCF2L-220ENST00000464800 NUP35Q8NFH5 326 aa8.9□□□□□ -0.98
MCF2L-220ENST00000464800 DIRC1Q969H9 104 aa8.9□□□□□ -0.98
MCF2L-220ENST00000464800 CAMK2N2Q96S95 79 aa8.9□□□□□ -0.98
MCF2L-220ENST00000464800 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
MCF2L-220ENST00000464800 A0A1B0GUT8 65 aa8.89□□□□□ -0.99
MCF2L-220ENST00000464800 RAB4AP20338 218 aa8.89□□□□□ -0.99
MCF2L-220ENST00000464800 CEBPGP53567 150 aa8.89□□□□□ -0.99
MCF2L-220ENST00000464800 ALKAL2Q6UX46 152 aa8.89□□□□□ -0.99
MCF2L-220ENST00000464800 TMEM191AQ9H0A3 160 aa8.89□□□□□ -0.99
MCF2L-220ENST00000464800 HIGD1CA8MV81 97 aa8.88□□□□□ -0.99
MCF2L-220ENST00000464800 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-220ENST00000464800 COX7A2LO14548 114 aa8.88□□□□□ -0.99
MCF2L-220ENST00000464800 BLOC1S1P78537 153 aa8.88□□□□□ -0.99
MCF2L-220ENST00000464800 PHF5AQ7RTV0 110 aaKnown RBP8.88□□□□□ -0.99
MCF2L-220ENST00000464800 TSKUQ8WUA8 353 aa8.88□□□□□ -0.99
MCF2L-220ENST00000464800 C7orf77A4D0Y5 90 aa8.87□□□□□ -0.99
MCF2L-220ENST00000464800 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
MCF2L-220ENST00000464800 AMN1Q8IY45 258 aa8.87□□□□□ -0.99
MCF2L-220ENST00000464800 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
MCF2L-220ENST00000464800 C1orf196B1AJZ1 125 aa8.86□□□□□ -0.99
MCF2L-220ENST00000464800 VCYO14598 125 aa8.86□□□□□ -0.99
MCF2L-220ENST00000464800 C2orf48Q96LS8 159 aa8.86□□□□□ -0.99
MCF2L-220ENST00000464800 H0Y9J4 135 aa8.85□□□□□ -0.99
MCF2L-220ENST00000464800 SMKR1H3BMG3 65 aa8.85□□□□□ -0.99
MCF2L-220ENST00000464800 FCER1GP30273 86 aa8.85□□□□□ -0.99
MCF2L-220ENST00000464800 LINC01551Q86U37 167 aa8.85□□□□□ -0.99
MCF2L-220ENST00000464800 SMIM7Q9BQ49 75 aa8.85□□□□□ -0.99
MCF2L-220ENST00000464800 KRTAP9-2Q9BYQ4 174 aa8.85□□□□□ -0.99
MCF2L-220ENST00000464800 IGLV1-50A0A075B6I6 118 aa8.84□□□□□ -0.99
MCF2L-220ENST00000464800 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
MCF2L-220ENST00000464800 OSTCQ9NRP0 149 aa8.84□□□□□ -0.99
MCF2L-220ENST00000464800 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
MCF2L-220ENST00000464800 CSDC2Q9Y534 153 aaKnown RBP8.84□□□□□ -0.99
MCF2L-220ENST00000464800 A0A087WZ39 114 aa8.83□□□□□ -1
MCF2L-220ENST00000464800 TRAV13-1A0A0B4J241 112 aa8.83□□□□□ -1
MCF2L-220ENST00000464800 SPAG11BQ08648 103 aa8.83□□□□□ -1
MCF2L-220ENST00000464800 PRR4Q16378 134 aa8.83□□□□□ -1
MCF2L-220ENST00000464800 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
MCF2L-220ENST00000464800 NRACQ8N912 160 aa8.83□□□□□ -1
MCF2L-220ENST00000464800 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
MCF2L-220ENST00000464800 ZNF727A8MUV8 499 aa8.82□□□□□ -1
MCF2L-220ENST00000464800 PPP1R17O96001 155 aa8.82□□□□□ -1
MCF2L-220ENST00000464800 SUMO2P61956 95 aaKnown RBP8.82□□□□□ -1
MCF2L-220ENST00000464800 SMAGPQ0VAQ4 97 aa8.82□□□□□ -1
MCF2L-220ENST00000464800 RIGQ13278 110 aa8.82□□□□□ -1
MCF2L-220ENST00000464800 RNF151Q2KHN1 245 aa8.82□□□□□ -1
MCF2L-220ENST00000464800 C5orf38Q86SI9 138 aa8.82□□□□□ -1
MCF2L-220ENST00000464800 UBE2D1P51668 147 aa8.81□□□□□ -1
MCF2L-220ENST00000464800 KIR2DL4Q99706 377 aa8.81□□□□□ -1
MCF2L-220ENST00000464800 V9GYV3 84 aa8.81□□□□□ -1
MCF2L-220ENST00000464800 OR10D4PQ8NGN7 298 aa8.8□□□□□ -1
MCF2L-220ENST00000464800 FAM168BA1KXE4 195 aa8.79□□□□□ -1
MCF2L-220ENST00000464800 PPP1R2P9O14990 202 aa8.79□□□□□ -1
MCF2L-220ENST00000464800 SRP19P09132 144 aaKnown RBP8.79□□□□□ -1
MCF2L-220ENST00000464800 KRTAP1-4P0C5Y4 121 aa8.79□□□□□ -1
MCF2L-220ENST00000464800 RPL13AP40429 203 aaKnown RBP8.79□□□□□ -1
MCF2L-220ENST00000464800 Q6ZUT4 128 aa8.79□□□□□ -1
MCF2L-220ENST00000464800 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
MCF2L-220ENST00000464800 IMMP2LQ96T52 175 aa8.79□□□□□ -1
MCF2L-220ENST00000464800 TIMM21Q9BVV7 248 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms