RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 Q6ZRP5 223 aa9.5□□□□□ -0.89
CMSS1-202ENST00000463526 TSHBP01222 138 aa9.49□□□□□ -0.89
CMSS1-202ENST00000463526 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.89
CMSS1-202ENST00000463526 ST20Q9HBF5 79 aa9.49□□□□□ -0.89
CMSS1-202ENST00000463526 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
CMSS1-202ENST00000463526 ESDP10768 282 aa9.48□□□□□ -0.89
CMSS1-202ENST00000463526 MRAP2Q96G30 205 aa9.48□□□□□ -0.89
CMSS1-202ENST00000463526 TRBV6-5A0A0K0K1A5 114 aa9.47□□□□□ -0.89
CMSS1-202ENST00000463526 CD164L2Q6UWJ8 174 aa9.47□□□□□ -0.89
CMSS1-202ENST00000463526 CDC42SE2Q9NRR3 84 aa9.47□□□□□ -0.89
CMSS1-202ENST00000463526 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.9
CMSS1-202ENST00000463526 A8MWL6 223 aa9.46□□□□□ -0.9
CMSS1-202ENST00000463526 TAGLN2P37802 199 aaKnown RBP9.46□□□□□ -0.9
CMSS1-202ENST00000463526 CAMPP49913 170 aa9.46□□□□□ -0.9
CMSS1-202ENST00000463526 CEBPGP53567 150 aa9.46□□□□□ -0.9
CMSS1-202ENST00000463526 PTTG1IPP53801 180 aa9.46□□□□□ -0.9
CMSS1-202ENST00000463526 ZNF664Q8N3J9 261 aa9.46□□□□□ -0.9
CMSS1-202ENST00000463526 LOC107984640A0A0U1RRK4 108 aa9.45□□□□□ -0.9
CMSS1-202ENST00000463526 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
CMSS1-202ENST00000463526 MALP21145 153 aa9.45□□□□□ -0.9
CMSS1-202ENST00000463526 BORCS7Q96B45 105 aa9.45□□□□□ -0.9
CMSS1-202ENST00000463526 C7orf77A4D0Y5 90 aa9.44□□□□□ -0.9
CMSS1-202ENST00000463526 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
CMSS1-202ENST00000463526 SLC51BQ86UW2 128 aa9.44□□□□□ -0.9
CMSS1-202ENST00000463526 ISOC2Q96AB3 205 aa9.44□□□□□ -0.9
CMSS1-202ENST00000463526 POLR2KP53803 58 aaKnown RBP9.43□□□□□ -0.9
CMSS1-202ENST00000463526 FAM231DQ6ZW35 169 aa9.43□□□□□ -0.9
CMSS1-202ENST00000463526 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
CMSS1-202ENST00000463526 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
CMSS1-202ENST00000463526 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
CMSS1-202ENST00000463526 COX7A2LO14548 114 aa9.42□□□□□ -0.9
CMSS1-202ENST00000463526 MT-ND6P03923 174 aa9.42□□□□□ -0.9
CMSS1-202ENST00000463526 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 C1orf196B1AJZ1 125 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 RAB4AP20338 218 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 FCER1GP30273 86 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
CMSS1-202ENST00000463526 C9orf116Q5BN46 136 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-202ENST00000463526 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 AMN1Q8IY45 258 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 NUP35Q8NFH5 326 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-202ENST00000463526 TMEM191AQ9H0A3 160 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
CMSS1-202ENST00000463526 TRBV27A0A0K0K1C4 114 aa9.4□□□□□ -0.9
CMSS1-202ENST00000463526 HIGD1CA8MV81 97 aa9.4□□□□□ -0.9
CMSS1-202ENST00000463526 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
CMSS1-202ENST00000463526 PHF5AQ7RTV0 110 aaKnown RBP9.4□□□□□ -0.9
CMSS1-202ENST00000463526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.39□□□□□ -0.91
CMSS1-202ENST00000463526 VCYO14598 125 aa9.39□□□□□ -0.91
CMSS1-202ENST00000463526 APOMO95445 188 aa9.39□□□□□ -0.91
CMSS1-202ENST00000463526 CT83Q5H943 113 aa9.39□□□□□ -0.91
CMSS1-202ENST00000463526 C1orf137Q5JT78 98 aa9.39□□□□□ -0.91
CMSS1-202ENST00000463526 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
CMSS1-202ENST00000463526 FAM210AQ96ND0 272 aa9.38□□□□□ -0.91
CMSS1-202ENST00000463526 UBE2D4Q9Y2X8 147 aa9.38□□□□□ -0.91
CMSS1-202ENST00000463526 LPAP08519 4548 aa9.38□□□□□ -0.91
CMSS1-202ENST00000463526 ALKAL2Q6UX46 152 aa9.37□□□□□ -0.91
CMSS1-202ENST00000463526 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
CMSS1-202ENST00000463526 SMIM7Q9BQ49 75 aa9.37□□□□□ -0.91
CMSS1-202ENST00000463526 BLOC1S1P78537 153 aa9.36□□□□□ -0.91
CMSS1-202ENST00000463526 SPAG11BQ08648 103 aa9.36□□□□□ -0.91
CMSS1-202ENST00000463526 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
CMSS1-202ENST00000463526 Q6ZUT4 128 aa9.36□□□□□ -0.91
CMSS1-202ENST00000463526 C2orf48Q96LS8 159 aa9.36□□□□□ -0.91
CMSS1-202ENST00000463526 SUMO2P61956 95 aaKnown RBP9.35□□□□□ -0.91
CMSS1-202ENST00000463526 SMAGPQ0VAQ4 97 aa9.35□□□□□ -0.91
CMSS1-202ENST00000463526 RIGQ13278 110 aa9.35□□□□□ -0.91
CMSS1-202ENST00000463526 LINC01551Q86U37 167 aa9.35□□□□□ -0.91
CMSS1-202ENST00000463526 PRR26Q8N8Z3 221 aa9.35□□□□□ -0.91
CMSS1-202ENST00000463526 NRACQ8N912 160 aa9.35□□□□□ -0.91
CMSS1-202ENST00000463526 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
CMSS1-202ENST00000463526 EIF5A2Q9GZV4 153 aaKnown RBP9.35□□□□□ -0.91
CMSS1-202ENST00000463526 OSTCQ9NRP0 149 aa9.34□□□□□ -0.91
CMSS1-202ENST00000463526 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
CMSS1-202ENST00000463526 A0A087WZ39 114 aa9.33□□□□□ -0.92
CMSS1-202ENST00000463526 ZNF727A8MUV8 499 aa9.33□□□□□ -0.92
CMSS1-202ENST00000463526 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
CMSS1-202ENST00000463526 PPP1R17O96001 155 aa9.32□□□□□ -0.92
CMSS1-202ENST00000463526 ORAOV1Q8WV07 137 aa9.32□□□□□ -0.92
CMSS1-202ENST00000463526 TMEM18Q96B42 140 aa9.32□□□□□ -0.92
CMSS1-202ENST00000463526 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
CMSS1-202ENST00000463526 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
CMSS1-202ENST00000463526 RNF151Q2KHN1 245 aa9.31□□□□□ -0.92
CMSS1-202ENST00000463526 MRPL51Q4U2R6 128 aaKnown RBP9.31□□□□□ -0.92
CMSS1-202ENST00000463526 DIRC1Q969H9 104 aa9.31□□□□□ -0.92
CMSS1-202ENST00000463526 V9GYV3 84 aa9.31□□□□□ -0.92
CMSS1-202ENST00000463526 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
CMSS1-202ENST00000463526 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
CMSS1-202ENST00000463526 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
CMSS1-202ENST00000463526 OR10D4PQ8NGN7 298 aa9.3□□□□□ -0.92
CMSS1-202ENST00000463526 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
CMSS1-202ENST00000463526 SRP19P09132 144 aaKnown RBP9.29□□□□□ -0.92
CMSS1-202ENST00000463526 GAGE2EQ4V326 116 aa9.29□□□□□ -0.92
CMSS1-202ENST00000463526 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
CMSS1-202ENST00000463526 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
CMSS1-202ENST00000463526 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
CMSS1-202ENST00000463526 IMMP2LQ96T52 175 aa9.29□□□□□ -0.92
CMSS1-202ENST00000463526 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms