RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 C1orf196B1AJZ1 125 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 ATP6V1G1O75348 118 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 NPSP0C0P6 89 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 LINC00614P0C842 121 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 RPL39P62891 51 aaKnown RBP4.27□□□□□ -1.73
SF3B1-206ENST00000462613 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
SF3B1-206ENST00000462613 TNP2Q05952 138 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 CFAP161Q6P656 301 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 ENHOQ6UWT2 76 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 TEX43Q6ZNM6 134 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-206ENST00000462613 C18orf32Q8TCD1 76 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 YPEL4Q96NS1 127 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 CDC42SE2Q9NRR3 84 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
SF3B1-206ENST00000462613 A0A087WTM6 91 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 LINC00959A0A1B0GUT2 108 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 IFITM10A6NMD0 228 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 HSBP1O75506 76 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 TRGC2P03986 189 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 SEC11AP67812 179 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 CDPF1Q6NVV7 123 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 BAGE3Q86Y29 109 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-206ENST00000462613 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
SF3B1-206ENST00000462613 TMEM141Q96I45 108 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 SCGB3A1Q96QR1 104 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 VCX2Q9H322 139 aa4.26□□□□□ -1.73
SF3B1-206ENST00000462613 LYSTQ99698 3801 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 COLCA2A8K830 154 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-206ENST00000462613 APOMO95445 188 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 HBDP02042 147 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 MALP21145 153 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 XCL1P47992 114 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 CD164L2Q6UWJ8 174 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 Q6ZUT4 128 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 ERASQ7Z444 233 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 NTN5Q8WTR8 489 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-206ENST00000462613 BAALCQ8WXS3 180 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 TOMM6Q96B49 74 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 TIMM17AQ99595 171 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 PGPEP1Q9NXJ5 209 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
SF3B1-206ENST00000462613 IGLV4-3A0A075B6K6 122 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 GAGE12HA6NDE8 117 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 LINC01546A6NGU7 62 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 C16orf90A8MZG2 172 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 SCO1O75880 301 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 ATP5LO75964 103 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 RNASE13Q5GAN3 156 aaKnown RBP4.24□□□□□ -1.73
SF3B1-206ENST00000462613 SPATA12Q7Z6I5 190 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 Q8N814 137 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
SF3B1-206ENST00000462613 DNAH1Q9P2D7 4330 aa4.24□□□□□ -1.73
SF3B1-206ENST00000462613 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-206ENST00000462613 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-206ENST00000462613 IGHV1-58A0A0C4DH39 117 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 USP17L23D6RBM5 183 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 ZNF561-AS1K7EIQ3 104 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 COX7A2LO14548 114 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 LECT2O14960 151 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 NDUFA6P56556 154 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 GEMIN7Q9H840 131 aaKnown RBP4.23□□□□□ -1.73
SF3B1-206ENST00000462613 PKIGQ9Y2B9 76 aa4.23□□□□□ -1.73
SF3B1-206ENST00000462613 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
SF3B1-206ENST00000462613 LRCOL1A6NCL2 159 aa4.22□□□□□ -1.73
SF3B1-206ENST00000462613 IGIPA6NJ69 53 aa4.22□□□□□ -1.73
SF3B1-206ENST00000462613 HERVK_113P63121 156 aa4.22□□□□□ -1.73
SF3B1-206ENST00000462613 PMVKQ15126 192 aa4.22□□□□□ -1.73
SF3B1-206ENST00000462613 PACRGQ96M98 296 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-206ENST00000462613 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-206ENST00000462613 SACSQ9NZJ4 4579 aa4.22□□□□□ -1.73
SF3B1-206ENST00000462613 HYDINQ4G0P3 5121 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 A0A1B0GVY2 172 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 PRSS1P07477 247 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 FOXI1Q12951 378 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 AMELXQ99217 191 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 HSPB8Q9UJY1 196 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 DNAH6Q9C0G6 4158 aa4.21□□□□□ -1.74
SF3B1-206ENST00000462613 H3BRM9 83 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 SERF1AO75920 110 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 LEPROTL1O95214 131 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 PRSS2P07478 247 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 GCSHP23434 173 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 UBE2D1P51668 147 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 PMCHL1Q16048 86 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 KRTAP26-1Q6PEX3 210 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 C5orf38Q86SI9 138 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 OR10D4PQ8NGN7 298 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 IFI27L1Q96BM0 104 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 KMT2AQ03164 3969 aa4.2□□□□□ -1.74
SF3B1-206ENST00000462613 A0A087WZ39 114 aa4.19□□□□□ -1.74
SF3B1-206ENST00000462613 GVQW2A0A096LPI5 108 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-206ENST00000462613 IGHV3OR16-9A0A0B4J2B5 98 aa4.19□□□□□ -1.74
SF3B1-206ENST00000462613 TINCRA0A1B0GVN0 87 aa4.19□□□□□ -1.74
SF3B1-206ENST00000462613 F8WDY8 70 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms