RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-204ENST00000462258 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
SF3A3-204ENST00000462258 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-204ENST00000462258 PPP1R17O96001 155 aa6.54□□□□□ -1.36
SF3A3-204ENST00000462258 FCER1GP30273 86 aa6.54□□□□□ -1.36
SF3A3-204ENST00000462258 CAMPP49913 170 aa6.54□□□□□ -1.36
SF3A3-204ENST00000462258 SUMO2P61956 95 aaKnown RBP6.54□□□□□ -1.36
SF3A3-204ENST00000462258 MRPL51Q4U2R6 128 aaKnown RBP6.54□□□□□ -1.36
SF3A3-204ENST00000462258 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
SF3A3-204ENST00000462258 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 A0A1B0GW15 77 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 PANO1I0J062 215 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 SLPIP03973 132 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 XCL1P47992 114 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 HIGD2BQ4VC39 106 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 FAM104BQ5XKR9 115 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 MRPL54Q6P161 138 aaKnown RBP6.53□□□□□ -1.36
SF3A3-204ENST00000462258 CFAP161Q6P656 301 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 MRPL52Q86TS9 123 aaKnown RBP6.53□□□□□ -1.36
SF3A3-204ENST00000462258 KIR2DL4Q99706 377 aa6.53□□□□□ -1.36
SF3A3-204ENST00000462258 GVQW2A0A096LPI5 108 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-204ENST00000462258 LINC00959A0A1B0GUT2 108 aa6.52□□□□□ -1.37
SF3A3-204ENST00000462258 VCYO14598 125 aa6.52□□□□□ -1.37
SF3A3-204ENST00000462258 CCL25O15444 150 aa6.52□□□□□ -1.37
SF3A3-204ENST00000462258 S100A8P05109 93 aa6.52□□□□□ -1.37
SF3A3-204ENST00000462258 KRTAP10-4P60372 401 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-204ENST00000462258 HBBP68871 147 aa6.52□□□□□ -1.37
SF3A3-204ENST00000462258 FOXI1Q12951 378 aa6.52□□□□□ -1.37
SF3A3-204ENST00000462258 SDIM1Q6ZPB5 146 aa6.52□□□□□ -1.37
SF3A3-204ENST00000462258 A0A1B0GXF2 115 aa6.51□□□□□ -1.37
SF3A3-204ENST00000462258 LINC00862A6NCI5 91 aa6.51□□□□□ -1.37
SF3A3-204ENST00000462258 A6NJY4 79 aa6.51□□□□□ -1.37
SF3A3-204ENST00000462258 CKS2P33552 79 aa6.51□□□□□ -1.37
SF3A3-204ENST00000462258 RPL37AP61513 92 aaKnown RBP6.51□□□□□ -1.37
SF3A3-204ENST00000462258 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
SF3A3-204ENST00000462258 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
SF3A3-204ENST00000462258 ZNF664Q8N3J9 261 aa6.51□□□□□ -1.37
SF3A3-204ENST00000462258 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
SF3A3-204ENST00000462258 F8W036 122 aa6.5□□□□□ -1.37
SF3A3-204ENST00000462258 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
SF3A3-204ENST00000462258 SS18Q15532 418 aa6.5□□□□□ -1.37
SF3A3-204ENST00000462258 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
SF3A3-204ENST00000462258 C20orf78Q9BR46 151 aa6.5□□□□□ -1.37
SF3A3-204ENST00000462258 UBE2D4Q9Y2X8 147 aa6.5□□□□□ -1.37
SF3A3-204ENST00000462258 TRBV24-1A0A075B6N3 115 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 D6R8Y8 96 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 TNFRSF6BO95407 300 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 RAB14P61106 215 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 RPL32P62910 135 aaKnown RBP6.49□□□□□ -1.37
SF3A3-204ENST00000462258 PNRC1Q12796 327 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-204ENST00000462258 RNASE13Q5GAN3 156 aaKnown RBP6.49□□□□□ -1.37
SF3A3-204ENST00000462258 Q6ZUT4 128 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 ATP5L2Q7Z4Y8 100 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
SF3A3-204ENST00000462258 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
SF3A3-204ENST00000462258 TCAPO15273 167 aa6.48□□□□□ -1.37
SF3A3-204ENST00000462258 NPYP01303 97 aa6.48□□□□□ -1.37
SF3A3-204ENST00000462258 COX6A2Q02221 97 aa6.48□□□□□ -1.37
SF3A3-204ENST00000462258 CD164L2Q6UWJ8 174 aa6.48□□□□□ -1.37
SF3A3-204ENST00000462258 TMEM18Q96B42 140 aa6.48□□□□□ -1.37
SF3A3-204ENST00000462258 A0A087WYN8 130 aa6.47□□□□□ -1.37
SF3A3-204ENST00000462258 IGKV2-24A0A0C4DH68 120 aa6.47□□□□□ -1.37
SF3A3-204ENST00000462258 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-204ENST00000462258 PHOX2AO14813 284 aa6.47□□□□□ -1.37
SF3A3-204ENST00000462258 PPBPP02775 128 aa6.47□□□□□ -1.37
SF3A3-204ENST00000462258 ORMDL3Q8N138 153 aa6.47□□□□□ -1.37
SF3A3-204ENST00000462258 CARD19Q96LW7 228 aa6.47□□□□□ -1.37
SF3A3-204ENST00000462258 TIMM21Q9BVV7 248 aa6.47□□□□□ -1.37
SF3A3-204ENST00000462258 TRAV13-1A0A0B4J241 112 aa6.46□□□□□ -1.38
SF3A3-204ENST00000462258 C1orf196B1AJZ1 125 aa6.46□□□□□ -1.38
SF3A3-204ENST00000462258 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.38
SF3A3-204ENST00000462258 CLLU1Q5K131 121 aa6.46□□□□□ -1.38
SF3A3-204ENST00000462258 PRSS3P2Q8NHM4 247 aa6.46□□□□□ -1.38
SF3A3-204ENST00000462258 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
SF3A3-204ENST00000462258 LINC00526Q96FQ7 95 aa6.46□□□□□ -1.38
SF3A3-204ENST00000462258 PKIGQ9Y2B9 76 aa6.46□□□□□ -1.38
SF3A3-204ENST00000462258 A0A096LNI7 61 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 ZNF561-AS1K7EIQ3 104 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 COX7A2LO14548 114 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 MT-ND4LP03901 98 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 MALP21145 153 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 HNRNPA3P51991 378 aaKnown RBP6.45□□□□□ -1.38
SF3A3-204ENST00000462258 MAJINQ3KP22 176 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 DPH3Q96FX2 82 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 PRELID3AQ96N28 172 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 SPANXA1Q9NS26 97 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 PLAC8Q9NZF1 115 aa6.45□□□□□ -1.38
SF3A3-204ENST00000462258 TMEM136Q6ZRR5 245 aa6.44□□□□□ -1.38
SF3A3-204ENST00000462258 IFITM10A6NMD0 228 aa6.43□□□□□ -1.38
SF3A3-204ENST00000462258 SYCNQ0VAF6 134 aa6.43□□□□□ -1.38
SF3A3-204ENST00000462258 STPG4Q8N801 248 aa6.43□□□□□ -1.38
SF3A3-204ENST00000462258 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
SF3A3-204ENST00000462258 LAMTOR2Q9Y2Q5 125 aa6.43□□□□□ -1.38
SF3A3-204ENST00000462258 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 IGLV4-69A0A075B6H9 119 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 APOMO95445 188 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 OXTP01178 125 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 ADCYAP1P18509 176 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms