RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CIRBPQ14011 172 aaKnown RBP9.86□□□□□ -0.83
NUP50-213ENST00000461437 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
NUP50-213ENST00000461437 NRACQ8N912 160 aa9.86□□□□□ -0.83
NUP50-213ENST00000461437 DPH3Q96FX2 82 aa9.86□□□□□ -0.83
NUP50-213ENST00000461437 MRAP2Q96G30 205 aa9.86□□□□□ -0.83
NUP50-213ENST00000461437 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
NUP50-213ENST00000461437 LINC00959A0A1B0GUT2 108 aa9.85□□□□□ -0.83
NUP50-213ENST00000461437 CAMPP49913 170 aa9.85□□□□□ -0.83
NUP50-213ENST00000461437 PRSS3P2Q8NHM4 247 aa9.85□□□□□ -0.83
NUP50-213ENST00000461437 SPACA4Q8TDM5 124 aa9.85□□□□□ -0.83
NUP50-213ENST00000461437 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
NUP50-213ENST00000461437 BTF3L4Q96K17 158 aa9.85□□□□□ -0.83
NUP50-213ENST00000461437 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
NUP50-213ENST00000461437 TRBV27A0A0K0K1C4 114 aa9.84□□□□□ -0.83
NUP50-213ENST00000461437 ZNF25P17030 456 aaPredicted RBP9.84□□□□□ -0.83
NUP50-213ENST00000461437 MRPL51Q4U2R6 128 aaKnown RBP9.84□□□□□ -0.83
NUP50-213ENST00000461437 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
NUP50-213ENST00000461437 NAT8Q9UHE5 227 aa9.84□□□□□ -0.83
NUP50-213ENST00000461437 NAT8BQ9UHF3 227 aa9.84□□□□□ -0.83
NUP50-213ENST00000461437 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
NUP50-213ENST00000461437 FAM74A3Q4VXF1 159 aa9.83□□□□□ -0.84
NUP50-213ENST00000461437 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
NUP50-213ENST00000461437 GVQW2A0A096LPI5 108 aaPredicted RBP9.82□□□□□ -0.84
NUP50-213ENST00000461437 FCER1GP30273 86 aa9.82□□□□□ -0.84
NUP50-213ENST00000461437 MRPL54Q6P161 138 aaKnown RBP9.82□□□□□ -0.84
NUP50-213ENST00000461437 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
NUP50-213ENST00000461437 SMIM27A0A1W2PRY6 76 aa9.81□□□□□ -0.84
NUP50-213ENST00000461437 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
NUP50-213ENST00000461437 PEA15Q15121 130 aa9.81□□□□□ -0.84
NUP50-213ENST00000461437 MAJINQ3KP22 176 aa9.81□□□□□ -0.84
NUP50-213ENST00000461437 FAM104BQ5XKR9 115 aa9.81□□□□□ -0.84
NUP50-213ENST00000461437 ZNF664Q8N3J9 261 aa9.81□□□□□ -0.84
NUP50-213ENST00000461437 UBR4Q5T4S7 5183 aa9.8□□□□□ -0.84
NUP50-213ENST00000461437 A0A096LNI7 61 aa9.8□□□□□ -0.84
NUP50-213ENST00000461437 VCYO14598 125 aa9.8□□□□□ -0.84
NUP50-213ENST00000461437 MRPL52Q86TS9 123 aaKnown RBP9.8□□□□□ -0.84
NUP50-213ENST00000461437 PHOX2AO14813 284 aa9.79□□□□□ -0.84
NUP50-213ENST00000461437 SS18Q15532 418 aa9.79□□□□□ -0.84
NUP50-213ENST00000461437 Q6ZUT4 128 aa9.79□□□□□ -0.84
NUP50-213ENST00000461437 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
NUP50-213ENST00000461437 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
NUP50-213ENST00000461437 PLAC8Q9NZF1 115 aa9.78□□□□□ -0.84
NUP50-213ENST00000461437 TRAV13-1A0A0B4J241 112 aa9.77□□□□□ -0.85
NUP50-213ENST00000461437 D6R8Y8 96 aa9.77□□□□□ -0.85
NUP50-213ENST00000461437 OXTP01178 125 aa9.77□□□□□ -0.85
NUP50-213ENST00000461437 CKS2P33552 79 aa9.77□□□□□ -0.85
NUP50-213ENST00000461437 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
NUP50-213ENST00000461437 CD164L2Q6UWJ8 174 aa9.77□□□□□ -0.85
NUP50-213ENST00000461437 STPG4Q8N801 248 aa9.77□□□□□ -0.85
NUP50-213ENST00000461437 KIR2DL4Q99706 377 aa9.77□□□□□ -0.85
NUP50-213ENST00000461437 NPYP01303 97 aa9.76□□□□□ -0.85
NUP50-213ENST00000461437 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
NUP50-213ENST00000461437 A0A1B0GXF2 115 aa9.75□□□□□ -0.85
NUP50-213ENST00000461437 TCAPO15273 167 aa9.75□□□□□ -0.85
NUP50-213ENST00000461437 TNFRSF6BO95407 300 aa9.75□□□□□ -0.85
NUP50-213ENST00000461437 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
NUP50-213ENST00000461437 OPRPNQ99935 248 aaPredicted RBP9.75□□□□□ -0.85
NUP50-213ENST00000461437 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
NUP50-213ENST00000461437 PPP1R2P9O14990 202 aa9.74□□□□□ -0.85
NUP50-213ENST00000461437 PPP1R17O96001 155 aa9.74□□□□□ -0.85
NUP50-213ENST00000461437 HBBP68871 147 aa9.74□□□□□ -0.85
NUP50-213ENST00000461437 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
NUP50-213ENST00000461437 TNXBP22105 4242 aa9.74□□□□□ -0.85
NUP50-213ENST00000461437 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
NUP50-213ENST00000461437 MALP21145 153 aa9.73□□□□□ -0.85
NUP50-213ENST00000461437 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
NUP50-213ENST00000461437 Q6ZRU5 148 aa9.73□□□□□ -0.85
NUP50-213ENST00000461437 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
NUP50-213ENST00000461437 TRBV24-1A0A075B6N3 115 aa9.72□□□□□ -0.85
NUP50-213ENST00000461437 LINC00862A6NCI5 91 aa9.72□□□□□ -0.85
NUP50-213ENST00000461437 COX7A2LO14548 114 aa9.72□□□□□ -0.85
NUP50-213ENST00000461437 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
NUP50-213ENST00000461437 C20orf78Q9BR46 151 aa9.72□□□□□ -0.85
NUP50-213ENST00000461437 SMDT1Q9H4I9 107 aa9.72□□□□□ -0.85
NUP50-213ENST00000461437 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
NUP50-213ENST00000461437 A0A1B0GW15 77 aa9.71□□□□□ -0.86
NUP50-213ENST00000461437 C1orf196B1AJZ1 125 aa9.71□□□□□ -0.86
NUP50-213ENST00000461437 MT1HL1P0DM35 61 aa9.71□□□□□ -0.86
NUP50-213ENST00000461437 C7orf33Q8WU49 177 aa9.71□□□□□ -0.86
NUP50-213ENST00000461437 A0A0J9YXV3 536 aa9.7□□□□□ -0.86
NUP50-213ENST00000461437 GAGE2BQ13066 116 aa9.7□□□□□ -0.86
NUP50-213ENST00000461437 F8W036 122 aa9.69□□□□□ -0.86
NUP50-213ENST00000461437 RPL32P62910 135 aaKnown RBP9.69□□□□□ -0.86
NUP50-213ENST00000461437 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
NUP50-213ENST00000461437 TMEM18Q96B42 140 aa9.69□□□□□ -0.86
NUP50-213ENST00000461437 CAMK2N2Q96S95 79 aa9.69□□□□□ -0.86
NUP50-213ENST00000461437 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
NUP50-213ENST00000461437 S100A8P05109 93 aa9.68□□□□□ -0.86
NUP50-213ENST00000461437 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
NUP50-213ENST00000461437 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
NUP50-213ENST00000461437 LOC389332A0A1B0GUA5 103 aa9.67□□□□□ -0.86
NUP50-213ENST00000461437 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
NUP50-213ENST00000461437 SMAGPQ0VAQ4 97 aa9.67□□□□□ -0.86
NUP50-213ENST00000461437 ODF1Q14990 250 aa9.67□□□□□ -0.86
NUP50-213ENST00000461437 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
NUP50-213ENST00000461437 ORMDL3Q8N138 153 aa9.66□□□□□ -0.86
NUP50-213ENST00000461437 LOC107984640A0A0U1RRK4 108 aa9.65□□□□□ -0.86
NUP50-213ENST00000461437 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
NUP50-213ENST00000461437 IFITM10A6NMD0 228 aa9.65□□□□□ -0.86
NUP50-213ENST00000461437 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms