RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 A0A1W2PPR1 153 aa7.38□□□□□ -1.23
UFD1-205ENST00000459854 TRBV6-5A0A0K0K1A5 114 aa7.38□□□□□ -1.23
UFD1-205ENST00000459854 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
UFD1-205ENST00000459854 IGKV1D-37A0A075B6S9 117 aa7.38□□□□□ -1.23
UFD1-205ENST00000459854 IGKV2D-26A0A0A0MRZ7 120 aa7.38□□□□□ -1.23
UFD1-205ENST00000459854 GPHB5Q86YW7 130 aa7.38□□□□□ -1.23
UFD1-205ENST00000459854 WFDC11Q8NEX6 87 aa7.38□□□□□ -1.23
UFD1-205ENST00000459854 DSPP15924 2871 aaKnown RBP7.37□□□□□ -1.23
UFD1-205ENST00000459854 IGHV4-28A0A0C4DH34 117 aa7.37□□□□□ -1.23
UFD1-205ENST00000459854 NCR3O14931 201 aa7.37□□□□□ -1.23
UFD1-205ENST00000459854 MYCNOSP40205 109 aa7.37□□□□□ -1.23
UFD1-205ENST00000459854 PRO0628Q9UI54 55 aa7.37□□□□□ -1.23
UFD1-205ENST00000459854 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
UFD1-205ENST00000459854 PRAC2D3DTV9 90 aa7.37□□□□□ -1.23
UFD1-205ENST00000459854 RUSC1-AS1Q66K80 236 aa7.37□□□□□ -1.23
UFD1-205ENST00000459854 HRCT1Q6UXD1 115 aa7.37□□□□□ -1.23
UFD1-205ENST00000459854 TMEM263Q8WUH6 116 aaKnown RBP7.36□□□□□ -1.23
UFD1-205ENST00000459854 CTSZQ9UBR2 303 aa7.36□□□□□ -1.23
UFD1-205ENST00000459854 MGAQ8IWI9 3026 aa7.36□□□□□ -1.23
UFD1-205ENST00000459854 IGSF10Q6WRI0 2623 aa7.36□□□□□ -1.23
UFD1-205ENST00000459854 SPAG11BQ08648 103 aa7.36□□□□□ -1.23
UFD1-205ENST00000459854 LINC00322Q6ZN03 302 aaPredicted RBP7.36□□□□□ -1.23
UFD1-205ENST00000459854 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
UFD1-205ENST00000459854 A6NED7 52 aa7.36□□□□□ -1.23
UFD1-205ENST00000459854 RPS28P62857 69 aaKnown RBP7.36□□□□□ -1.23
UFD1-205ENST00000459854 MIFP14174 115 aa7.35□□□□□ -1.23
UFD1-205ENST00000459854 ZMAT4Q9H898 229 aa7.35□□□□□ -1.23
UFD1-205ENST00000459854 Q8N976 141 aa7.35□□□□□ -1.23
UFD1-205ENST00000459854 VPREB3Q9UKI3 123 aa7.35□□□□□ -1.23
UFD1-205ENST00000459854 PRRC2CQ9Y520 2896 aaKnown RBP7.35□□□□□ -1.23
UFD1-205ENST00000459854 IGLV4-3A0A075B6K6 122 aa7.35□□□□□ -1.23
UFD1-205ENST00000459854 GYPEP15421 78 aa7.35□□□□□ -1.23
UFD1-205ENST00000459854 LMO4P61968 165 aa7.35□□□□□ -1.23
UFD1-205ENST00000459854 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
UFD1-205ENST00000459854 RNF185Q96GF1 192 aa7.34□□□□□ -1.23
UFD1-205ENST00000459854 CCDC168Q8NDH2 2452 aa7.34□□□□□ -1.23
UFD1-205ENST00000459854 IGLV1-47P01700 117 aa7.34□□□□□ -1.23
UFD1-205ENST00000459854 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
UFD1-205ENST00000459854 IGHV4-4A0A075B6R2 117 aa7.34□□□□□ -1.24
UFD1-205ENST00000459854 UBE2D3P61077 147 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 UBE2D2P62837 147 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 KIAA2026Q5HYC2 2103 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 ZFAND2AQ8N6M9 145 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 AJUBAQ96IF1 538 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 MALRD1Q5VYJ5 2156 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 Q8N9W7 124 aa7.33□□□□□ -1.24
UFD1-205ENST00000459854 UBE2D1P51668 147 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 IGHV4OR15-8A0A075B7B6 117 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 A0A087WW49 117 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 ZNF80P51504 273 aaPredicted RBP7.32□□□□□ -1.24
UFD1-205ENST00000459854 BCE1O60756 84 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 CCKP06307 115 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 IGHV4-31P0DP07 118 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 LOC107984640A0A0U1RRK4 108 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 Q6ZQT7 251 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 CNFNQ9BYD5 112 aa7.32□□□□□ -1.24
UFD1-205ENST00000459854 DNAH14Q0VDD8 3507 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 MYO15AQ9UKN7 3530 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 DYSFO75923 2080 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 TRBV7-7A0A0K0K1E9 115 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 SPART-AS1P0CW21 52 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 NRACQ8N912 160 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 ZFP36P26651 326 aaKnown RBP7.31□□□□□ -1.24
UFD1-205ENST00000459854 INSL3P51460 131 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 C5orf56Q8N8D9 126 aa7.31□□□□□ -1.24
UFD1-205ENST00000459854 HHLA3Q9XRX5 114 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 PRB2P02812 416 aaPredicted RBP7.3□□□□□ -1.24
UFD1-205ENST00000459854 CDKN2A-AS1Q9UH64 79 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 USP34Q70CQ2 3546 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 H0Y9J4 135 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 CGB3P0DN86 165 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 CGB7P0DN87 165 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 CHD6Q8TD26 2715 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 WNK2Q9Y3S1 2297 aa7.3□□□□□ -1.24
UFD1-205ENST00000459854 MED13LQ71F56 2210 aa7.29□□□□□ -1.24
UFD1-205ENST00000459854 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
UFD1-205ENST00000459854 USP9YO00507 2555 aaPredicted RBP7.29□□□□□ -1.24
UFD1-205ENST00000459854 LINC00310P59036 64 aa7.29□□□□□ -1.24
UFD1-205ENST00000459854 HCFC1P51610 2035 aa7.29□□□□□ -1.24
UFD1-205ENST00000459854 TRBV10-3A0A0K0K1G6 114 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.28□□□□□ -1.24
UFD1-205ENST00000459854 B9D2Q9BPU9 175 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 SNURFQ9Y675 71 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 HIVEP2P31629 2446 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 SPRY2O43597 315 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 COX17Q14061 63 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 RITA1Q96K30 269 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.28□□□□□ -1.241e-7■■■□□ 17.3
UFD1-205ENST00000459854 M0QY20 66 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 PRO0255Q9UI72 69 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 USP9XQ93008 2570 aaPredicted RBP7.28□□□□□ -1.24
UFD1-205ENST00000459854 ARFGEF3Q5TH69 2177 aa7.28□□□□□ -1.24
UFD1-205ENST00000459854 SIRPDQ9H106 197 aa7.27□□□□□ -1.24
UFD1-205ENST00000459854 FRYQ5TBA9 3013 aa7.27□□□□□ -1.25
UFD1-205ENST00000459854 BRWD1-AS2P59051 145 aa7.27□□□□□ -1.25
UFD1-205ENST00000459854 DMXL2Q8TDJ6 3036 aa7.27□□□□□ -1.25
UFD1-205ENST00000459854 IGLV2-11P01706 119 aa7.27□□□□□ -1.25
UFD1-205ENST00000459854 CASC2Q6XLA1 102 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms