RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 CFAP161Q6P656 301 aa7.56□□□□□ -1.2
PDGFB-204ENST00000455790 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
PDGFB-204ENST00000455790 PRSS3P2Q8NHM4 247 aa7.56□□□□□ -1.2
PDGFB-204ENST00000455790 MRAP2Q96G30 205 aa7.56□□□□□ -1.2
PDGFB-204ENST00000455790 TRBV27A0A0K0K1C4 114 aa7.55□□□□□ -1.2
PDGFB-204ENST00000455790 LINC00959A0A1B0GUT2 108 aa7.55□□□□□ -1.2
PDGFB-204ENST00000455790 RPL23P62829 140 aaKnown RBP7.55□□□□□ -1.2
PDGFB-204ENST00000455790 SRSF3P84103 164 aaKnown RBP7.55□□□□□ -1.2
PDGFB-204ENST00000455790 NRACQ8N912 160 aa7.55□□□□□ -1.2
PDGFB-204ENST00000455790 LINC00526Q96FQ7 95 aa7.55□□□□□ -1.2
PDGFB-204ENST00000455790 IGKV2-24A0A0C4DH68 120 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 ADIRFQ15847 76 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 TMEM241Q24JQ0 296 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 MRPL52Q86TS9 123 aaKnown RBP7.54□□□□□ -1.2
PDGFB-204ENST00000455790 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 TMEM101Q96IK0 257 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 BTF3L4Q96K17 158 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
PDGFB-204ENST00000455790 A0A096LNI7 61 aa7.53□□□□□ -1.2
PDGFB-204ENST00000455790 PHOX2AO14813 284 aa7.53□□□□□ -1.2
PDGFB-204ENST00000455790 RIGQ13278 110 aa7.53□□□□□ -1.2
PDGFB-204ENST00000455790 RNASE13Q5GAN3 156 aaKnown RBP7.53□□□□□ -1.2
PDGFB-204ENST00000455790 CDC42SE2Q9NRR3 84 aa7.53□□□□□ -1.2
PDGFB-204ENST00000455790 MT1HL1P0DM35 61 aa7.52□□□□□ -1.21
PDGFB-204ENST00000455790 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
PDGFB-204ENST00000455790 MAJINQ3KP22 176 aa7.52□□□□□ -1.21
PDGFB-204ENST00000455790 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
PDGFB-204ENST00000455790 ZNF664Q8N3J9 261 aa7.52□□□□□ -1.21
PDGFB-204ENST00000455790 NAT8BQ9UHF3 227 aa7.52□□□□□ -1.21
PDGFB-204ENST00000455790 IGHV1-58A0A0C4DH39 117 aa7.51□□□□□ -1.21
PDGFB-204ENST00000455790 SMIM27A0A1W2PRY6 76 aa7.51□□□□□ -1.21
PDGFB-204ENST00000455790 FCER1GP30273 86 aa7.51□□□□□ -1.21
PDGFB-204ENST00000455790 FAM74A3Q4VXF1 159 aa7.51□□□□□ -1.21
PDGFB-204ENST00000455790 FAM104BQ5XKR9 115 aa7.51□□□□□ -1.21
PDGFB-204ENST00000455790 NAT8Q9UHE5 227 aa7.51□□□□□ -1.21
PDGFB-204ENST00000455790 VCYO14598 125 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 CAMPP49913 170 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 SS18Q15532 418 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 CD164L2Q6UWJ8 174 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 Q6ZUT4 128 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 STPG4Q8N801 248 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 CARD19Q96LW7 228 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 UBE2D4Q9Y2X8 147 aa7.5□□□□□ -1.21
PDGFB-204ENST00000455790 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
PDGFB-204ENST00000455790 TRAV13-1A0A0B4J241 112 aa7.48□□□□□ -1.21
PDGFB-204ENST00000455790 PPP1R17O96001 155 aa7.48□□□□□ -1.21
PDGFB-204ENST00000455790 PRR3P79522 188 aaKnown RBP7.48□□□□□ -1.21
PDGFB-204ENST00000455790 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
PDGFB-204ENST00000455790 Q6ZRU5 148 aa7.48□□□□□ -1.21
PDGFB-204ENST00000455790 C7orf33Q8WU49 177 aa7.48□□□□□ -1.21
PDGFB-204ENST00000455790 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
PDGFB-204ENST00000455790 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
PDGFB-204ENST00000455790 RPL39P62891 51 aaKnown RBP7.47□□□□□ -1.21
PDGFB-204ENST00000455790 SYCNQ0VAF6 134 aa7.47□□□□□ -1.21
PDGFB-204ENST00000455790 PEA15Q15121 130 aa7.47□□□□□ -1.21
PDGFB-204ENST00000455790 FAM104AQ969W3 186 aa7.47□□□□□ -1.21
PDGFB-204ENST00000455790 CSDC2Q9Y534 153 aaKnown RBP7.47□□□□□ -1.21
PDGFB-204ENST00000455790 TNXBP22105 4242 aa7.46□□□□□ -1.21
PDGFB-204ENST00000455790 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 TRBV24-1A0A075B6N3 115 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 C1orf196B1AJZ1 125 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 D6R8Y8 96 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 ZNF561-AS1K7EIQ3 104 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 COX7A2LO14548 114 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 PPP1R2P9O14990 202 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 NPYP01303 97 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 CKS2P33552 79 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 C20orf78Q9BR46 151 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 SMIM2Q9BVW6 85 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 PLA2G2DQ9UNK4 145 aa7.46□□□□□ -1.22
PDGFB-204ENST00000455790 A0A1B0GW15 77 aa7.45□□□□□ -1.22
PDGFB-204ENST00000455790 LINC00862A6NCI5 91 aa7.45□□□□□ -1.22
PDGFB-204ENST00000455790 MALP21145 153 aa7.45□□□□□ -1.22
PDGFB-204ENST00000455790 RPL32P62910 135 aaKnown RBP7.45□□□□□ -1.22
PDGFB-204ENST00000455790 HBBP68871 147 aa7.45□□□□□ -1.22
PDGFB-204ENST00000455790 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
PDGFB-204ENST00000455790 OPRPNQ99935 248 aaPredicted RBP7.45□□□□□ -1.22
PDGFB-204ENST00000455790 TIMM21Q9BVV7 248 aa7.45□□□□□ -1.22
PDGFB-204ENST00000455790 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
PDGFB-204ENST00000455790 PTTG1IPP53801 180 aa7.44□□□□□ -1.22
PDGFB-204ENST00000455790 SMDT1Q9H4I9 107 aa7.44□□□□□ -1.22
PDGFB-204ENST00000455790 TCAPO15273 167 aa7.43□□□□□ -1.22
PDGFB-204ENST00000455790 GAGE2BQ13066 116 aa7.43□□□□□ -1.22
PDGFB-204ENST00000455790 LINC00474Q9P2X8 69 aa7.43□□□□□ -1.22
PDGFB-204ENST00000455790 F8W036 122 aa7.42□□□□□ -1.22
PDGFB-204ENST00000455790 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.42□□□□□ -1.22
PDGFB-204ENST00000455790 SPAG11BQ08648 103 aa7.42□□□□□ -1.22
PDGFB-204ENST00000455790 SMAGPQ0VAQ4 97 aa7.42□□□□□ -1.22
PDGFB-204ENST00000455790 ODF1Q14990 250 aa7.42□□□□□ -1.22
PDGFB-204ENST00000455790 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
PDGFB-204ENST00000455790 CAMK2N2Q96S95 79 aa7.42□□□□□ -1.22
PDGFB-204ENST00000455790 PKIGQ9Y2B9 76 aa7.42□□□□□ -1.22
PDGFB-204ENST00000455790 A0A0J9YXV3 536 aa7.41□□□□□ -1.22
PDGFB-204ENST00000455790 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
PDGFB-204ENST00000455790 APOMO95445 188 aa7.41□□□□□ -1.22
PDGFB-204ENST00000455790 S100A8P05109 93 aa7.41□□□□□ -1.22
PDGFB-204ENST00000455790 SPANXA1Q9NS26 97 aa7.41□□□□□ -1.22
PDGFB-204ENST00000455790 A0A1W2PNN7 141 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms