RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 H7C423 109 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 IGLV1-51P01701 117 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 CREBBPQ92793 2442 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 OVOL2Q9BRP0 275 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 PTPN13Q12923 2485 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 TRGV1A0A0A0MS02 117 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 GIG44P09565 113 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 INSL3P51460 131 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 ADAMTSL4-AS1Q5T5F5 129 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 MTURNQ8N3F0 131 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 LINC01006Q8NI28 216 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 C16orf74Q96GX8 76 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 CARD19Q96LW7 228 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 C19orf73Q9NVV2 129 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
ECHDC1-209ENST00000454591 BAHCC1Q9P281 2608 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 IGHV3-38A0A0C4DH36 116 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 PLAC8L1A1L4L8 177 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 NDUFA7O95182 113 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 SCGB1C2P0DMR2 95 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 RNASE13Q5GAN3 156 aaKnown RBP8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 NTM-AS1Q6ZSK4 140 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 TMEM101Q96IK0 257 aa8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 CITED2Q99967 270 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-209ENST00000454591 NAV2Q8IVL1 2488 aa8.93□□□□□ -0.98
ECHDC1-209ENST00000454591 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
ECHDC1-209ENST00000454591 DGAT2L7PQ6IED9 249 aa8.93□□□□□ -0.98
ECHDC1-209ENST00000454591 Q6ZTI0 123 aa8.93□□□□□ -0.98
ECHDC1-209ENST00000454591 TRBV6-4A0A1B0GX49 114 aa8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 SLC25A20O43772 301 aa8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 CSNK1G2-AS1Q8NCQ2 148 aa8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 ZNF418Q8TF45 676 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 COPS9Q8WXC6 57 aa8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 CDIP1Q9H305 208 aa8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
ECHDC1-209ENST00000454591 POLQO75417 2590 aa8.91□□□□□ -0.98
ECHDC1-209ENST00000454591 ADARB2-AS1A8MUL3 147 aa8.91□□□□□ -0.98
ECHDC1-209ENST00000454591 LINC01620Q4KN68 170 aa8.91□□□□□ -0.98
ECHDC1-209ENST00000454591 SFTA2Q6UW10 78 aa8.91□□□□□ -0.98
ECHDC1-209ENST00000454591 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
ECHDC1-209ENST00000454591 LRRK2Q5S007 2527 aa8.91□□□□□ -0.98
ECHDC1-209ENST00000454591 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
ECHDC1-209ENST00000454591 TRIAP1O43715 76 aa8.9□□□□□ -0.98
ECHDC1-209ENST00000454591 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
ECHDC1-209ENST00000454591 COX6A2Q02221 97 aa8.9□□□□□ -0.98
ECHDC1-209ENST00000454591 CIRBPQ14011 172 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-209ENST00000454591 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
ECHDC1-209ENST00000454591 ICOSQ9Y6W8 199 aa8.9□□□□□ -0.98
ECHDC1-209ENST00000454591 MAP1AP78559 2803 aaPredicted RBP8.9□□□□□ -0.99
ECHDC1-209ENST00000454591 TRBV10-2A0A0K0K1G8 114 aa8.9□□□□□ -0.99
ECHDC1-209ENST00000454591 A0A1W2PRX2 142 aa8.9□□□□□ -0.99
ECHDC1-209ENST00000454591 F5H768 121 aa8.9□□□□□ -0.99
ECHDC1-209ENST00000454591 RPL13AP40429 203 aaKnown RBP8.9□□□□□ -0.99
ECHDC1-209ENST00000454591 HERV-K104P63124 156 aa8.9□□□□□ -0.99
ECHDC1-209ENST00000454591 ZNF625Q96I27 306 aaPredicted RBP8.9□□□□□ -0.99
ECHDC1-209ENST00000454591 FASNP49327 2511 aaKnown RBP8.89□□□□□ -0.99
ECHDC1-209ENST00000454591 C9JAW5 83 aa8.89□□□□□ -0.99
ECHDC1-209ENST00000454591 TMEM262E9PQX1 116 aa8.89□□□□□ -0.99
ECHDC1-209ENST00000454591 PRSS2P07478 247 aa8.89□□□□□ -0.99
ECHDC1-209ENST00000454591 COX6CP09669 75 aa8.89□□□□□ -0.99
ECHDC1-209ENST00000454591 HILS1P60008 231 aa8.89□□□□□ -0.99
ECHDC1-209ENST00000454591 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
ECHDC1-209ENST00000454591 A8MZ25 164 aa8.88□□□□□ -0.99
ECHDC1-209ENST00000454591 H3BT86 120 aa8.88□□□□□ -0.99
ECHDC1-209ENST00000454591 Q1RN00 199 aa8.88□□□□□ -0.99
ECHDC1-209ENST00000454591 HIST2H2BDQ6DRA6 164 aa8.88□□□□□ -0.99
ECHDC1-209ENST00000454591 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-209ENST00000454591 APCP25054 2843 aa8.87□□□□□ -0.99
ECHDC1-209ENST00000454591 LINC00612Q8N6U2 182 aa8.87□□□□□ -0.99
ECHDC1-209ENST00000454591 GAGE12JA6NER3 117 aa8.86□□□□□ -0.99
ECHDC1-209ENST00000454591 LST1O00453 97 aa8.86□□□□□ -0.99
ECHDC1-209ENST00000454591 GAGE4Q13068 117 aa8.86□□□□□ -0.99
ECHDC1-209ENST00000454591 GAGE5Q13069 117 aa8.86□□□□□ -0.99
ECHDC1-209ENST00000454591 C11orf44Q8N8P7 122 aa8.86□□□□□ -0.99
ECHDC1-209ENST00000454591 LINC00308Q8TCZ7 52 aa8.86□□□□□ -0.99
ECHDC1-209ENST00000454591 Q9H8V8 135 aa8.86□□□□□ -0.99
ECHDC1-209ENST00000454591 ITPR3Q14573 2671 aa8.85□□□□□ -0.99
ECHDC1-209ENST00000454591 KIR2DL5BQ8NHK3 375 aa8.85□□□□□ -0.99
ECHDC1-209ENST00000454591 H7C2G1 150 aa8.84□□□□□ -0.99
ECHDC1-209ENST00000454591 FHL2Q14192 279 aa8.84□□□□□ -0.99
ECHDC1-209ENST00000454591 DEFB121Q5J5C9 76 aa8.84□□□□□ -0.99
ECHDC1-209ENST00000454591 SHISA2Q6UWI4 295 aa8.84□□□□□ -0.99
ECHDC1-209ENST00000454591 MYO9AB2RTY4 2548 aa8.84□□□□□ -0.99
ECHDC1-209ENST00000454591 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
ECHDC1-209ENST00000454591 TRGV2A0A075B6R0 118 aa8.83□□□□□ -1
ECHDC1-209ENST00000454591 UBE2L6O14933 153 aa8.83□□□□□ -1
ECHDC1-209ENST00000454591 GAGE7O76087 117 aa8.83□□□□□ -1
ECHDC1-209ENST00000454591 GAGE12FP0CL80 117 aa8.83□□□□□ -1
ECHDC1-209ENST00000454591 GAGE12GP0CL81 117 aa8.83□□□□□ -1
ECHDC1-209ENST00000454591 GAGE12IP0CL82 117 aa8.83□□□□□ -1
ECHDC1-209ENST00000454591 CSMD2Q7Z408 3487 aa8.82□□□□□ -1
ECHDC1-209ENST00000454591 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
ECHDC1-209ENST00000454591 CENPEQ02224 2701 aa8.82□□□□□ -1
ECHDC1-209ENST00000454591 TRBV6-8A0A0A6YYG3 113 aa8.81□□□□□ -1
ECHDC1-209ENST00000454591 PF4P02776 101 aa8.81□□□□□ -1
ECHDC1-209ENST00000454591 FAM222AQ5U5X8 452 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms