RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IFNA1P01562 189 aa10.22□□□□□ -0.77
UBE2D4-209ENST00000454428 FOXA3P55318 350 aaPredicted RBP10.22□□□□□ -0.77
UBE2D4-209ENST00000454428 EIF5AP63241 154 aaKnown RBP10.22□□□□□ -0.77
UBE2D4-209ENST00000454428 KCNRGQ8N5I3 272 aa10.22□□□□□ -0.77
UBE2D4-209ENST00000454428 FAM213BQ8TBF2 198 aa10.22□□□□□ -0.77
UBE2D4-209ENST00000454428 TMEM101Q96IK0 257 aa10.22□□□□□ -0.77
UBE2D4-209ENST00000454428 BTF3L4Q96K17 158 aa10.22□□□□□ -0.77
UBE2D4-209ENST00000454428 RAB19A4D1S5 217 aa10.21□□□□□ -0.77
UBE2D4-209ENST00000454428 TSHBP01222 138 aa10.21□□□□□ -0.77
UBE2D4-209ENST00000454428 UBE2D1P51668 147 aa10.21□□□□□ -0.77
UBE2D4-209ENST00000454428 TWIST1Q15672 202 aa10.21□□□□□ -0.77
UBE2D4-209ENST00000454428 C2orf48Q96LS8 159 aa10.21□□□□□ -0.77
UBE2D4-209ENST00000454428 XKRY2A2RUG3 117 aa10.2□□□□□ -0.78
UBE2D4-209ENST00000454428 EIF5AL1Q6IS14 154 aaKnown RBP10.2□□□□□ -0.78
UBE2D4-209ENST00000454428 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
UBE2D4-209ENST00000454428 TRBV20OR9-2A0A075B6H5 130 aa10.19□□□□□ -0.78
UBE2D4-209ENST00000454428 TRAV1-1A0A0B4J248 108 aa10.19□□□□□ -0.78
UBE2D4-209ENST00000454428 I3L3M4 83 aa10.19□□□□□ -0.78
UBE2D4-209ENST00000454428 COX7A2LO14548 114 aa10.19□□□□□ -0.78
UBE2D4-209ENST00000454428 RPL13AP40429 203 aaKnown RBP10.19□□□□□ -0.78
UBE2D4-209ENST00000454428 MRPL52Q86TS9 123 aaKnown RBP10.19□□□□□ -0.78
UBE2D4-209ENST00000454428 TSPAN13O95857 204 aa10.18□□□□□ -0.78
UBE2D4-209ENST00000454428 PMCHP20382 165 aa10.18□□□□□ -0.78
UBE2D4-209ENST00000454428 MALP21145 153 aa10.18□□□□□ -0.78
UBE2D4-209ENST00000454428 CCL20P78556 96 aa10.18□□□□□ -0.78
UBE2D4-209ENST00000454428 TRBV6-5A0A0K0K1A5 114 aa10.17□□□□□ -0.78
UBE2D4-209ENST00000454428 ARPC5O15511 151 aa10.17□□□□□ -0.78
UBE2D4-209ENST00000454428 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
UBE2D4-209ENST00000454428 SMIM12Q96EX1 92 aa10.17□□□□□ -0.78
UBE2D4-209ENST00000454428 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
UBE2D4-209ENST00000454428 TMEM242Q9NWH2 141 aa10.17□□□□□ -0.78
UBE2D4-209ENST00000454428 GNG4P50150 75 aa10.16□□□□□ -0.78
UBE2D4-209ENST00000454428 NUDT10Q8NFP7 164 aa10.16□□□□□ -0.78
UBE2D4-209ENST00000454428 NUDT11Q96G61 164 aa10.16□□□□□ -0.78
UBE2D4-209ENST00000454428 RNASE7Q9H1E1 156 aaKnown RBP10.16□□□□□ -0.78
UBE2D4-209ENST00000454428 CARHSP1Q9Y2V2 147 aaKnown RBP10.16□□□□□ -0.78
UBE2D4-209ENST00000454428 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
UBE2D4-209ENST00000454428 C1orf196B1AJZ1 125 aa10.14□□□□□ -0.79
UBE2D4-209ENST00000454428 H2AFB1P0C5Y9 115 aa10.14□□□□□ -0.79
UBE2D4-209ENST00000454428 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
UBE2D4-209ENST00000454428 C5orf38Q86SI9 138 aa10.14□□□□□ -0.79
UBE2D4-209ENST00000454428 TSKUQ8WUA8 353 aa10.14□□□□□ -0.79
UBE2D4-209ENST00000454428 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
UBE2D4-209ENST00000454428 RNASE13Q5GAN3 156 aaKnown RBP10.13□□□□□ -0.79
UBE2D4-209ENST00000454428 TEX261Q6UWH6 196 aa10.13□□□□□ -0.79
UBE2D4-209ENST00000454428 RPP21Q9H633 154 aaKnown RBP10.13□□□□□ -0.79
UBE2D4-209ENST00000454428 MANBALQ9NQG1 85 aa10.13□□□□□ -0.79
UBE2D4-209ENST00000454428 MRPL35Q9NZE8 188 aaKnown RBP10.13□□□□□ -0.79
UBE2D4-209ENST00000454428 GNG13Q9P2W3 67 aa10.13□□□□□ -0.79
UBE2D4-209ENST00000454428 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
UBE2D4-209ENST00000454428 C10orf25Q5T742 122 aa10.12□□□□□ -0.79
UBE2D4-209ENST00000454428 TLX1NBP0CAT3 122 aa10.11□□□□□ -0.79
UBE2D4-209ENST00000454428 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
UBE2D4-209ENST00000454428 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
UBE2D4-209ENST00000454428 C7orf77A4D0Y5 90 aa10.1□□□□□ -0.79
UBE2D4-209ENST00000454428 CRCT1Q9UGL9 99 aa10.1□□□□□ -0.79
UBE2D4-209ENST00000454428 A0A087X002 238 aa10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 TRBV27A0A0K0K1C4 114 aa10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 M0QXV9 152 aa10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 IMMP2LQ96T52 175 aa10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 ST20Q9HBF5 79 aa10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 UBE2D4Q9Y2X8 147 aa10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
UBE2D4-209ENST00000454428 K7EN84 100 aa10.08□□□□□ -0.8
UBE2D4-209ENST00000454428 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
UBE2D4-209ENST00000454428 FAM210AQ96ND0 272 aa10.08□□□□□ -0.8
UBE2D4-209ENST00000454428 BIN3Q9NQY0 253 aa10.08□□□□□ -0.8
UBE2D4-209ENST00000454428 C6orf48Q9UBA6 75 aa10.08□□□□□ -0.8
UBE2D4-209ENST00000454428 SMLR1H3BR10 107 aa10.07□□□□□ -0.8
UBE2D4-209ENST00000454428 UBE2BP63146 152 aa10.07□□□□□ -0.8
UBE2D4-209ENST00000454428 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
UBE2D4-209ENST00000454428 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
UBE2D4-209ENST00000454428 SMDT1Q9H4I9 107 aa10.07□□□□□ -0.8
UBE2D4-209ENST00000454428 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
UBE2D4-209ENST00000454428 ZNF861PO60384 105 aa10.06□□□□□ -0.8
UBE2D4-209ENST00000454428 Q6ZUT4 128 aa10.06□□□□□ -0.8
UBE2D4-209ENST00000454428 ORAOV1Q8WV07 137 aa10.06□□□□□ -0.8
UBE2D4-209ENST00000454428 ZNF345Q14585 488 aa10.05□□□□□ -0.8
UBE2D4-209ENST00000454428 RETNLBQ9BQ08 111 aa10.05□□□□□ -0.8
UBE2D4-209ENST00000454428 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
UBE2D4-209ENST00000454428 F8WDY8 70 aa10.04□□□□□ -0.8
UBE2D4-209ENST00000454428 NDUFA1O15239 70 aa10.04□□□□□ -0.8
UBE2D4-209ENST00000454428 PDE6DO43924 150 aa10.04□□□□□ -0.8
UBE2D4-209ENST00000454428 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
UBE2D4-209ENST00000454428 IGHV3OR16-9A0A0B4J2B5 98 aa10.03□□□□□ -0.8
UBE2D4-209ENST00000454428 C9orf129Q5T035 196 aaKnown RBP10.03□□□□□ -0.8
UBE2D4-209ENST00000454428 OCC1Q8TAD7 63 aa10.03□□□□□ -0.8
UBE2D4-209ENST00000454428 TMEM241Q24JQ0 296 aa10.02□□□□□ -0.81
UBE2D4-209ENST00000454428 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
UBE2D4-209ENST00000454428 RAB4AP20338 218 aa10□□□□□ -0.81
UBE2D4-209ENST00000454428 KIAA0087Q14695 138 aa10□□□□□ -0.81
UBE2D4-209ENST00000454428 TYMSOSQ8TAI1 123 aa10□□□□□ -0.81
UBE2D4-209ENST00000454428 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
UBE2D4-209ENST00000454428 VCYO14598 125 aa9.99□□□□□ -0.81
UBE2D4-209ENST00000454428 FCER1GP30273 86 aa9.99□□□□□ -0.81
UBE2D4-209ENST00000454428 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
UBE2D4-209ENST00000454428 TMEM191AQ9H0A3 160 aa9.99□□□□□ -0.81
UBE2D4-209ENST00000454428 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
UBE2D4-209ENST00000454428 AMN1Q8IY45 258 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms