RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 SLURP1P55000 103 aa12.69□□□□□ -0.38
TCF3-204ENST00000453954 MIAQ16674 131 aa12.69□□□□□ -0.38
TCF3-204ENST00000453954 IGHV4-30-2A0A087WSY4 118 aa12.69□□□□□ -0.38
TCF3-204ENST00000453954 IGKV3D-7A0A0C4DH55 119 aa12.69□□□□□ -0.38
TCF3-204ENST00000453954 BAALC-AS2P0C853 105 aa12.69□□□□□ -0.38
TCF3-204ENST00000453954 MED14OSP0DP75 135 aa12.69□□□□□ -0.38
TCF3-204ENST00000453954 C19orf54Q5BKX5 351 aa12.69□□□□□ -0.38
TCF3-204ENST00000453954 PFN2P35080 140 aa12.68□□□□□ -0.38
TCF3-204ENST00000453954 DNAL4O96015 105 aa12.68□□□□□ -0.38
TCF3-204ENST00000453954 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
TCF3-204ENST00000453954 VSIG2Q96IQ7 327 aa12.68□□□□□ -0.38
TCF3-204ENST00000453954 TRBV30A0A0K0K1B3 111 aa12.67□□□□□ -0.38
TCF3-204ENST00000453954 IGHG2P01859 326 aa12.67□□□□□ -0.38
TCF3-204ENST00000453954 TINCRA0A1B0GVN0 87 aa12.66□□□□□ -0.38
TCF3-204ENST00000453954 LINC00158P58513 81 aa12.66□□□□□ -0.38
TCF3-204ENST00000453954 NSUN5P1Q3KNT7 163 aa12.66□□□□□ -0.38
TCF3-204ENST00000453954 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
TCF3-204ENST00000453954 VPS13CQ709C8 3753 aa12.66□□□□□ -0.38
TCF3-204ENST00000453954 ATP5G1P05496 136 aa12.65□□□□□ -0.38
TCF3-204ENST00000453954 DEFB112Q30KQ8 113 aa12.65□□□□□ -0.38
TCF3-204ENST00000453954 C18orf65Q6ZTR6 163 aa12.65□□□□□ -0.38
TCF3-204ENST00000453954 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
TCF3-204ENST00000453954 AVPP01185 164 aa12.65□□□□□ -0.38
TCF3-204ENST00000453954 DAZ2Q13117 558 aaKnown RBP12.65□□□□□ -0.38
TCF3-204ENST00000453954 DAZ4Q86SG3 579 aaKnown RBP12.65□□□□□ -0.38
TCF3-204ENST00000453954 DAZ3Q9NR90 486 aaKnown RBP12.65□□□□□ -0.38
TCF3-204ENST00000453954 UBE2L6O14933 153 aa12.64□□□□□ -0.39
TCF3-204ENST00000453954 COX6A2Q02221 97 aa12.64□□□□□ -0.39
TCF3-204ENST00000453954 Q8N2B8 174 aa12.64□□□□□ -0.39
TCF3-204ENST00000453954 C9orf85Q96MD7 179 aa12.64□□□□□ -0.39
TCF3-204ENST00000453954 TRBV6-5A0A0K0K1A5 114 aa12.63□□□□□ -0.39
TCF3-204ENST00000453954 RBMY1A1P0DJD3 496 aaKnown RBP12.63□□□□□ -0.39
TCF3-204ENST00000453954 RBMY1CP0DJD4 496 aa12.63□□□□□ -0.39
TCF3-204ENST00000453954 RBMY1FQ15415 496 aaKnown RBP12.63□□□□□ -0.39
TCF3-204ENST00000453954 TEX15Q9BXT5 2789 aa12.63□□□□□ -0.39
TCF3-204ENST00000453954 LST1O00453 97 aa12.62□□□□□ -0.39
TCF3-204ENST00000453954 HIST1H4AP62805 103 aaKnown RBP12.62□□□□□ -0.39
TCF3-204ENST00000453954 GCN1Q92616 2671 aaKnown RBP12.62□□□□□ -0.39
TCF3-204ENST00000453954 FBXL19-AS1Q494R0 122 aa12.62□□□□□ -0.39
TCF3-204ENST00000453954 SDIM1Q6ZPB5 146 aa12.62□□□□□ -0.39
TCF3-204ENST00000453954 FASNP49327 2511 aaKnown RBP12.62□□□□□ -0.39
TCF3-204ENST00000453954 H3BT86 120 aa12.61□□□□□ -0.39
TCF3-204ENST00000453954 NIPBLQ6KC79 2804 aaeCLIP12.61□□□□□ -0.391e-6■■■□□ 18.6
TCF3-204ENST00000453954 LOC107984640A0A0U1RRK4 108 aa12.61□□□□□ -0.39
TCF3-204ENST00000453954 MSMBP08118 114 aa12.61□□□□□ -0.39
TCF3-204ENST00000453954 PAX4O43316 350 aa12.6□□□□□ -0.39
TCF3-204ENST00000453954 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
TCF3-204ENST00000453954 LINC00308Q8TCZ7 52 aa12.6□□□□□ -0.39
TCF3-204ENST00000453954 SLPIP03973 132 aa12.6□□□□□ -0.39
TCF3-204ENST00000453954 PPDPFQ9H3Y8 114 aa12.6□□□□□ -0.39
TCF3-204ENST00000453954 K7EQG2 157 aa12.59□□□□□ -0.39
TCF3-204ENST00000453954 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
TCF3-204ENST00000453954 C14orf132Q9NPU4 83 aa12.59□□□□□ -0.39
TCF3-204ENST00000453954 A6NDX4 124 aa12.59□□□□□ -0.39
TCF3-204ENST00000453954 CRPP02741 224 aa12.59□□□□□ -0.39
TCF3-204ENST00000453954 TRGV2A0A075B6R0 118 aa12.58□□□□□ -0.4
TCF3-204ENST00000453954 LINC00694P0DN24 101 aa12.58□□□□□ -0.4
TCF3-204ENST00000453954 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.4
TCF3-204ENST00000453954 MRPS36P82909 103 aaKnown RBP12.58□□□□□ -0.4
TCF3-204ENST00000453954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.58□□□□□ -0.4
TCF3-204ENST00000453954 UBE2D4Q9Y2X8 147 aa12.58□□□□□ -0.4
TCF3-204ENST00000453954 LITAFQ99732 161 aa12.57□□□□□ -0.4
TCF3-204ENST00000453954 C5orf38Q86SI9 138 aa12.56□□□□□ -0.4
TCF3-204ENST00000453954 MXRA5Q9NR99 2828 aa12.56□□□□□ -0.4
TCF3-204ENST00000453954 CFAP46Q8IYW2 2715 aa12.55□□□□□ -0.4
TCF3-204ENST00000453954 RPL35AP18077 110 aaKnown RBP12.54□□□□□ -0.4
TCF3-204ENST00000453954 A0A087WVE0 104 aa12.54□□□□□ -0.4
TCF3-204ENST00000453954 MIR7-3HGQ8N6C7 128 aa12.54□□□□□ -0.4
TCF3-204ENST00000453954 CITED2Q99967 270 aaPredicted RBP12.54□□□□□ -0.4
TCF3-204ENST00000453954 CHCHD7Q9BUK0 85 aa12.54□□□□□ -0.4
TCF3-204ENST00000453954 SPANXA1Q9NS26 97 aa12.54□□□□□ -0.4
TCF3-204ENST00000453954 A0A096LPF7 62 aa12.54□□□□□ -0.4
TCF3-204ENST00000453954 hADV29S1A0JD25 119 aa12.54□□□□□ -0.4
TCF3-204ENST00000453954 TIRAPP58753 221 aa12.53□□□□□ -0.4
TCF3-204ENST00000453954 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
TCF3-204ENST00000453954 STHQ8IWL8 128 aa12.53□□□□□ -0.4
TCF3-204ENST00000453954 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
TCF3-204ENST00000453954 COX7A2LO14548 114 aa12.52□□□□□ -0.4
TCF3-204ENST00000453954 SOSTDC1Q6X4U4 206 aa12.52□□□□□ -0.41
TCF3-204ENST00000453954 NOP10Q9NPE3 64 aaKnown RBP12.52□□□□□ -0.41
TCF3-204ENST00000453954 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 Q6ZTI0 123 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 K7EMT4 169 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 LECT2O14960 151 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 HERVK_113P63121 156 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 SPANXDQ9BXN6 97 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 SPANXCQ9NY87 97 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 IGLV1-40P01703 118 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 FAM218AQ96MZ4 157 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 SND1-IT1Q9HBX3 110 aa12.51□□□□□ -0.41
TCF3-204ENST00000453954 A0A1B0GX51 115 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 M0QXV9 152 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 PRB1P04280 392 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 WFDC9Q8NEX5 89 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 LOC100131303A0A0U1RQF7 123 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 B4DSR2 109 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 NCR3O14931 201 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 LINC00242Q5T6M2 205 aa12.5□□□□□ -0.41
TCF3-204ENST00000453954 RBMY1BA6NDE4 496 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 242.9 ms