RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 MRPL52Q86TS9 123 aaKnown RBP8.75□□□□□ -1.01
LYSMD3-202ENST00000453259 DIRC1Q969H9 104 aa8.75□□□□□ -1.01
LYSMD3-202ENST00000453259 MRAP2Q96G30 205 aa8.75□□□□□ -1.01
LYSMD3-202ENST00000453259 IGLV4-69A0A075B6H9 119 aa8.74□□□□□ -1.01
LYSMD3-202ENST00000453259 HMSDA8MTL9 139 aa8.74□□□□□ -1.01
LYSMD3-202ENST00000453259 APOMO95445 188 aa8.74□□□□□ -1.01
LYSMD3-202ENST00000453259 MEF2BQ02080 365 aaPredicted RBP8.74□□□□□ -1.01
LYSMD3-202ENST00000453259 KANTRA0A1W2PQU2 76 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 A6NJY4 79 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 BCL2L11O43521 198 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 ESDP10768 282 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 SMAGPQ0VAQ4 97 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 GAGE2BQ13066 116 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 RPL39LQ96EH5 51 aaKnown RBP8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 C2orf48Q96LS8 159 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 RPP21Q9H633 154 aaKnown RBP8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 CDC42SE2Q9NRR3 84 aa8.73□□□□□ -1.01
LYSMD3-202ENST00000453259 TRBV20OR9-2A0A075B6H5 130 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 RAB19A4D1S5 217 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 C1orf196B1AJZ1 125 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 PMCHP20382 165 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 MALP21145 153 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 NUP35Q8NFH5 326 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 NUDT10Q8NFP7 164 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 LINC00526Q96FQ7 95 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 NUDT11Q96G61 164 aa8.72□□□□□ -1.01
LYSMD3-202ENST00000453259 IGLV1-50A0A075B6I6 118 aa8.71□□□□□ -1.02
LYSMD3-202ENST00000453259 COX7A2LO14548 114 aa8.71□□□□□ -1.02
LYSMD3-202ENST00000453259 TAGLN2P37802 199 aaKnown RBP8.71□□□□□ -1.02
LYSMD3-202ENST00000453259 RNF151Q2KHN1 245 aa8.71□□□□□ -1.02
LYSMD3-202ENST00000453259 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
LYSMD3-202ENST00000453259 CAMK2N2Q96S95 79 aa8.71□□□□□ -1.02
LYSMD3-202ENST00000453259 MED9Q9NWA0 146 aa8.71□□□□□ -1.02
LYSMD3-202ENST00000453259 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
LYSMD3-202ENST00000453259 F8WDY8 70 aa8.7□□□□□ -1.02
LYSMD3-202ENST00000453259 C1orf137Q5JT78 98 aa8.7□□□□□ -1.02
LYSMD3-202ENST00000453259 CSDC2Q9Y534 153 aaKnown RBP8.7□□□□□ -1.02
LYSMD3-202ENST00000453259 LPAP08519 4548 aa8.7□□□□□ -1.02
LYSMD3-202ENST00000453259 C7orf77A4D0Y5 90 aa8.69□□□□□ -1.02
LYSMD3-202ENST00000453259 TSHBP01222 138 aa8.69□□□□□ -1.02
LYSMD3-202ENST00000453259 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
LYSMD3-202ENST00000453259 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
LYSMD3-202ENST00000453259 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
LYSMD3-202ENST00000453259 H0Y9J4 135 aa8.68□□□□□ -1.02
LYSMD3-202ENST00000453259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.68□□□□□ -1.02
LYSMD3-202ENST00000453259 BCL2P10415 239 aa8.68□□□□□ -1.02
LYSMD3-202ENST00000453259 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
LYSMD3-202ENST00000453259 PRR26Q8N8Z3 221 aa8.68□□□□□ -1.02
LYSMD3-202ENST00000453259 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
LYSMD3-202ENST00000453259 BATF3Q9NR55 127 aa8.67□□□□□ -1.02
LYSMD3-202ENST00000453259 OR10D4PQ8NGN7 298 aa8.66□□□□□ -1.02
LYSMD3-202ENST00000453259 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
LYSMD3-202ENST00000453259 IMMP2LQ96T52 175 aa8.66□□□□□ -1.02
LYSMD3-202ENST00000453259 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
LYSMD3-202ENST00000453259 A8MWL6 223 aa8.65□□□□□ -1.02
LYSMD3-202ENST00000453259 PPP1R17O96001 155 aa8.65□□□□□ -1.02
LYSMD3-202ENST00000453259 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.02
LYSMD3-202ENST00000453259 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
LYSMD3-202ENST00000453259 CT83Q5H943 113 aa8.65□□□□□ -1.02
LYSMD3-202ENST00000453259 RNASE7Q9H1E1 156 aaKnown RBP8.65□□□□□ -1.02
LYSMD3-202ENST00000453259 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.02
LYSMD3-202ENST00000453259 MUC2Q02817 5179 aa8.64□□□□□ -1.03
LYSMD3-202ENST00000453259 SMLR1H3BR10 107 aa8.64□□□□□ -1.03
LYSMD3-202ENST00000453259 RGS21Q2M5E4 152 aa8.64□□□□□ -1.03
LYSMD3-202ENST00000453259 FAM231DQ6ZW35 169 aa8.64□□□□□ -1.03
LYSMD3-202ENST00000453259 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
LYSMD3-202ENST00000453259 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
LYSMD3-202ENST00000453259 K7EN84 100 aa8.63□□□□□ -1.03
LYSMD3-202ENST00000453259 VCYO14598 125 aa8.63□□□□□ -1.03
LYSMD3-202ENST00000453259 UBE2D1P51668 147 aa8.63□□□□□ -1.03
LYSMD3-202ENST00000453259 SPAG11BQ08648 103 aa8.63□□□□□ -1.03
LYSMD3-202ENST00000453259 TMEM191AQ9H0A3 160 aa8.63□□□□□ -1.03
LYSMD3-202ENST00000453259 A0A087WZ39 114 aa8.62□□□□□ -1.03
LYSMD3-202ENST00000453259 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
LYSMD3-202ENST00000453259 FCER1GP30273 86 aa8.62□□□□□ -1.03
LYSMD3-202ENST00000453259 OCC1Q8TAD7 63 aa8.62□□□□□ -1.03
LYSMD3-202ENST00000453259 TIMM21Q9BVV7 248 aa8.62□□□□□ -1.03
LYSMD3-202ENST00000453259 CARHSP1Q9Y2V2 147 aaKnown RBP8.62□□□□□ -1.03
LYSMD3-202ENST00000453259 UBE2D4Q9Y2X8 147 aa8.62□□□□□ -1.03
LYSMD3-202ENST00000453259 GATCO43716 136 aaKnown RBP8.61□□□□□ -1.03
LYSMD3-202ENST00000453259 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
LYSMD3-202ENST00000453259 PRR4Q16378 134 aa8.61□□□□□ -1.03
LYSMD3-202ENST00000453259 TMEM241Q24JQ0 296 aa8.61□□□□□ -1.03
LYSMD3-202ENST00000453259 TMEM18Q96B42 140 aa8.61□□□□□ -1.03
LYSMD3-202ENST00000453259 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
LYSMD3-202ENST00000453259 A0A1B0GUT8 65 aa8.6□□□□□ -1.03
LYSMD3-202ENST00000453259 TMEM250H0YL14 139 aa8.6□□□□□ -1.03
LYSMD3-202ENST00000453259 NDUFA1O15239 70 aa8.6□□□□□ -1.03
LYSMD3-202ENST00000453259 TRAV13-1A0A0B4J241 112 aa8.59□□□□□ -1.03
LYSMD3-202ENST00000453259 PPP1R2P9O14990 202 aa8.59□□□□□ -1.03
LYSMD3-202ENST00000453259 TCAPO15273 167 aa8.59□□□□□ -1.03
LYSMD3-202ENST00000453259 RAB4AP20338 218 aa8.58□□□□□ -1.04
LYSMD3-202ENST00000453259 C5orf38Q86SI9 138 aa8.58□□□□□ -1.04
LYSMD3-202ENST00000453259 OPRPNQ99935 248 aaPredicted RBP8.58□□□□□ -1.04
LYSMD3-202ENST00000453259 SUMO2P61956 95 aaKnown RBP8.57□□□□□ -1.04
LYSMD3-202ENST00000453259 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
LYSMD3-202ENST00000453259 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
LYSMD3-202ENST00000453259 SMDT1Q9H4I9 107 aa8.56□□□□□ -1.04
LYSMD3-202ENST00000453259 IGHV3OR16-9A0A0B4J2B5 98 aa8.55□□□□□ -1.04
LYSMD3-202ENST00000453259 Q6ZUT4 128 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms