RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
RAPGEF3-205ENST00000449771 CSDC2Q9Y534 153 aaKnown RBP10.39□□□□□ -0.75
RAPGEF3-205ENST00000449771 C2orf91Q6ZV80 131 aa10.39□□□□□ -0.75
RAPGEF3-205ENST00000449771 TMEM223A0PJW6 202 aa10.39□□□□□ -0.75
RAPGEF3-205ENST00000449771 WFDC10AQ9H1F0 79 aa10.39□□□□□ -0.75
RAPGEF3-205ENST00000449771 Q6ZPA2 131 aa10.38□□□□□ -0.75
RAPGEF3-205ENST00000449771 TIMM17BO60830 172 aa10.38□□□□□ -0.75
RAPGEF3-205ENST00000449771 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
RAPGEF3-205ENST00000449771 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
RAPGEF3-205ENST00000449771 M0QY20 66 aa10.38□□□□□ -0.75
RAPGEF3-205ENST00000449771 Q8N976 141 aa10.38□□□□□ -0.75
RAPGEF3-205ENST00000449771 DCANP1Q8TF63 244 aa10.38□□□□□ -0.75
RAPGEF3-205ENST00000449771 IBA57-AS1B1ANH7 110 aa10.37□□□□□ -0.75
RAPGEF3-205ENST00000449771 EIF4EBP1Q13541 118 aaPredicted RBP10.37□□□□□ -0.75
RAPGEF3-205ENST00000449771 SLPIP03973 132 aa10.37□□□□□ -0.75
RAPGEF3-205ENST00000449771 MLST8Q9BVC4 326 aa10.37□□□□□ -0.75
RAPGEF3-205ENST00000449771 ZNF22P17026 224 aaPredicted RBP10.36□□□□□ -0.75
RAPGEF3-205ENST00000449771 Q6Q795 121 aa10.36□□□□□ -0.75
RAPGEF3-205ENST00000449771 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
RAPGEF3-205ENST00000449771 RETNQ9HD89 108 aa10.36□□□□□ -0.75
RAPGEF3-205ENST00000449771 KIAA1549LQ6ZVL6 1849 aa10.35□□□□□ -0.75
RAPGEF3-205ENST00000449771 IGKV2-28A0A075B6P5 120 aa10.35□□□□□ -0.75
RAPGEF3-205ENST00000449771 IGKV2D-28P01615 120 aa10.35□□□□□ -0.75
RAPGEF3-205ENST00000449771 MUC6Q6W4X9 2439 aa10.35□□□□□ -0.75
RAPGEF3-205ENST00000449771 ENHOQ6UWT2 76 aa10.35□□□□□ -0.75
RAPGEF3-205ENST00000449771 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 SCXQ7RTU7 201 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 ATP5EP2Q5VTU8 51 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 NANOS2P60321 138 aaKnown RBP10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 ZNF706Q9Y5V0 76 aaPredicted RBP10.34□□□□□ -0.75
RAPGEF3-205ENST00000449771 LINC00308Q8TCZ7 52 aa10.33□□□□□ -0.76
RAPGEF3-205ENST00000449771 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
RAPGEF3-205ENST00000449771 WFDC10BQ8IUB3 73 aa10.33□□□□□ -0.76
RAPGEF3-205ENST00000449771 CRIP1P50238 77 aa10.33□□□□□ -0.76
RAPGEF3-205ENST00000449771 Q6ZS46 218 aa10.33□□□□□ -0.76
RAPGEF3-205ENST00000449771 LELP1Q5T871 98 aa10.32□□□□□ -0.76
RAPGEF3-205ENST00000449771 CRIP3Q6Q6R5 217 aa10.32□□□□□ -0.76
RAPGEF3-205ENST00000449771 LINC00526Q96FQ7 95 aa10.32□□□□□ -0.76
RAPGEF3-205ENST00000449771 SMR3AQ99954 134 aa10.32□□□□□ -0.76
RAPGEF3-205ENST00000449771 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
RAPGEF3-205ENST00000449771 TRIAP1O43715 76 aa10.32□□□□□ -0.76
RAPGEF3-205ENST00000449771 ZNF295-AS1Q8N0V1 137 aa10.32□□□□□ -0.76
RAPGEF3-205ENST00000449771 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 NDUFC1O43677 76 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 Q8N6K4 173 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 SNURFQ9Y675 71 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 MED13LQ71F56 2210 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 CD164L2Q6UWJ8 174 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 FAM208BQ5VWN6 2430 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
RAPGEF3-205ENST00000449771 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
RAPGEF3-205ENST00000449771 C1orf158Q8N1D5 194 aa10.3□□□□□ -0.76
RAPGEF3-205ENST00000449771 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
RAPGEF3-205ENST00000449771 HIVEP2P31629 2446 aa10.3□□□□□ -0.76
RAPGEF3-205ENST00000449771 TRBV30A0A0K0K1B3 111 aa10.3□□□□□ -0.76
RAPGEF3-205ENST00000449771 UBE2D3P61077 147 aa10.3□□□□□ -0.76
RAPGEF3-205ENST00000449771 PTPRQQ9UMZ3 2332 aa10.3□□□□□ -0.76
RAPGEF3-205ENST00000449771 IGLV1-40P01703 118 aa10.29□□□□□ -0.76
RAPGEF3-205ENST00000449771 C6orf99Q4VX62 202 aa10.29□□□□□ -0.76
RAPGEF3-205ENST00000449771 PLCE1Q9P212 2302 aa10.29□□□□□ -0.76
RAPGEF3-205ENST00000449771 PRM2P04554 102 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 SERP1Q9Y6X1 66 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 SHANK1Q9Y566 2161 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 M0R378 163 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 TSHBP01222 138 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 CDSNQ15517 529 aa10.28□□□□□ -0.76
RAPGEF3-205ENST00000449771 LINC00959A0A1B0GUT2 108 aa10.27□□□□□ -0.76
RAPGEF3-205ENST00000449771 ALPK3Q96L96 1907 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 A8MZ25 164 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 C3orf84H3BNL1 204 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 DHRS4-AS1Q9P1J3 65 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 U3KQK5 164 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 PLAC8L1A1L4L8 177 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 CCKP06307 115 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 PRR9Q5T870 116 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 NUP210LQ5VU65 1888 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 IGLV9-49A0A0B4J1Y8 123 aa10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 RNASE3P12724 160 aaKnown RBP10.27□□□□□ -0.77
RAPGEF3-205ENST00000449771 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
RAPGEF3-205ENST00000449771 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
RAPGEF3-205ENST00000449771 MBD6Q96DN6 1003 aa10.25□□□□□ -0.77
RAPGEF3-205ENST00000449771 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
RAPGEF3-205ENST00000449771 LINC00474Q9P2X8 69 aa10.25□□□□□ -0.77
RAPGEF3-205ENST00000449771 CREBBPQ92793 2442 aa10.24□□□□□ -0.77
RAPGEF3-205ENST00000449771 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
RAPGEF3-205ENST00000449771 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
RAPGEF3-205ENST00000449771 NCOA6Q14686 2063 aaPredicted RBP10.24□□□□□ -0.77
RAPGEF3-205ENST00000449771 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
RAPGEF3-205ENST00000449771 KRTAP10-9P60411 292 aa10.24□□□□□ -0.77
RAPGEF3-205ENST00000449771 KLLNB2CW77 178 aa10.23□□□□□ -0.77
RAPGEF3-205ENST00000449771 AVPP01185 164 aa10.23□□□□□ -0.77
RAPGEF3-205ENST00000449771 MRGPRG-AS1Q2M3A8 158 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms