RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 UNQ9165/PRO28630Q6UXU0 137 aa7.72□□□□□ -1.17
LINC00342-202ENST00000448494 ITLN2Q8WWU7 325 aaPredicted RBP7.72□□□□□ -1.17
LINC00342-202ENST00000448494 CHD8Q9HCK8 2581 aa7.72□□□□□ -1.17
LINC00342-202ENST00000448494 IGLV5-39A0A0G2JS06 123 aa7.71□□□□□ -1.17
LINC00342-202ENST00000448494 IGKV2-29A2NJV5 120 aaPredicted RBP7.71□□□□□ -1.17
LINC00342-202ENST00000448494 E7EQL1 145 aa7.71□□□□□ -1.17
LINC00342-202ENST00000448494 IGLV1-47P01700 117 aa7.71□□□□□ -1.17
LINC00342-202ENST00000448494 HES7Q9BYE0 225 aa7.71□□□□□ -1.17
LINC00342-202ENST00000448494 FAM208BQ5VWN6 2430 aa7.71□□□□□ -1.17
LINC00342-202ENST00000448494 ARHGAP32A7KAX9 2087 aa7.71□□□□□ -1.17
LINC00342-202ENST00000448494 IGHV3-23P01764 117 aa7.71□□□□□ -1.18
LINC00342-202ENST00000448494 POLEQ07864 2286 aa7.71□□□□□ -1.18
LINC00342-202ENST00000448494 ATRXP46100 2492 aa7.7□□□□□ -1.18
LINC00342-202ENST00000448494 LECT2O14960 151 aa7.7□□□□□ -1.18
LINC00342-202ENST00000448494 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
LINC00342-202ENST00000448494 FUSP35637 526 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00342-202ENST00000448494 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
LINC00342-202ENST00000448494 CADP27708 2225 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 A0A087WZ39 114 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 CDKN2A-AS1Q9UH64 79 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 IGHV3OR16-8A0A075B7F1 116 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 LYRM9A8MSI8 78 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 Q6ZTC4 211 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 C11orf72Q8NBR9 251 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 NPBQ8NG41 125 aa7.69□□□□□ -1.18
LINC00342-202ENST00000448494 CXCL6P80162 114 aa7.68□□□□□ -1.18
LINC00342-202ENST00000448494 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
LINC00342-202ENST00000448494 MUC4Q99102 2169 aa7.68□□□□□ -1.18
LINC00342-202ENST00000448494 LINC01547P58512 204 aaPredicted RBP7.68□□□□□ -1.18
LINC00342-202ENST00000448494 FAM74A4Q5TZK3 123 aa7.68□□□□□ -1.18
LINC00342-202ENST00000448494 LINC00337Q8N6G1 96 aa7.68□□□□□ -1.18
LINC00342-202ENST00000448494 IGHV3-66A0A0C4DH42 116 aa7.67□□□□□ -1.18
LINC00342-202ENST00000448494 M0R1B8 84 aa7.67□□□□□ -1.18
LINC00342-202ENST00000448494 PRYO14603 147 aa7.67□□□□□ -1.18
LINC00342-202ENST00000448494 UBE2E2Q96LR5 201 aa7.67□□□□□ -1.18
LINC00342-202ENST00000448494 NREPQ16612 68 aa7.66□□□□□ -1.18
LINC00342-202ENST00000448494 CNEP1R1Q8N9A8 125 aa7.66□□□□□ -1.18
LINC00342-202ENST00000448494 IGHV3-35A0A0C4DH35 117 aa7.66□□□□□ -1.18
LINC00342-202ENST00000448494 hDV103S1A0JD37 113 aa7.66□□□□□ -1.18
LINC00342-202ENST00000448494 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
LINC00342-202ENST00000448494 RPL36AP83881 106 aaKnown RBP7.66□□□□□ -1.18
LINC00342-202ENST00000448494 C11orf45Q8TAV5 145 aa7.66□□□□□ -1.18
LINC00342-202ENST00000448494 RPL36ALQ969Q0 106 aaKnown RBP7.66□□□□□ -1.18
LINC00342-202ENST00000448494 DEFB127Q9H1M4 99 aa7.66□□□□□ -1.18
LINC00342-202ENST00000448494 DNAJC13O75165 2243 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 IGKV2-28A0A075B6P5 120 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 LY6G6EA0A0G2JKS1 128 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 IGKV2D-28P01615 120 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 APOC4P55056 127 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 RNASE13Q5GAN3 156 aaKnown RBP7.65□□□□□ -1.18
LINC00342-202ENST00000448494 ARRDC1-AS1Q9H2J1 176 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 LINC00588Q9Y4M8 146 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 U3KQA8 63 aa7.65□□□□□ -1.18
LINC00342-202ENST00000448494 PLCE1Q9P212 2302 aa7.65□□□□□ -1.19
LINC00342-202ENST00000448494 NDUFS5O43920 106 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 Q6ZRP5 223 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 LINC01560Q8TB33 94 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 PKD1L2Q7Z442 2459 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 SLPIP03973 132 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 UBE2BP63146 152 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 PLA2G2CQ5R387 149 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 Q8N3U1 123 aa7.64□□□□□ -1.19
LINC00342-202ENST00000448494 SND1-IT1Q9HBX3 110 aa7.63□□□□□ -1.19
LINC00342-202ENST00000448494 KAAG1Q9UBP8 84 aa7.63□□□□□ -1.19
LINC00342-202ENST00000448494 KLLNB2CW77 178 aa7.63□□□□□ -1.19
LINC00342-202ENST00000448494 M0R378 163 aa7.63□□□□□ -1.19
LINC00342-202ENST00000448494 LYPD2Q6UXB3 125 aa7.63□□□□□ -1.19
LINC00342-202ENST00000448494 IGHV1OR15-1A0A075B7D0 117 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 IGHV3OR16-13A0A075B7E8 117 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 IGHV3-74A0A0B4J1X5 117 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 KLK9Q2XQG4 91 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 Q6ZVQ6 151 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 Q8N6K4 173 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 KLK9Q9UKQ9 250 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 NBEAQ8NFP9 2946 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 IGHV3-38A0A0C4DH36 116 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 CCL4P13236 92 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 FAM19A3Q7Z5A8 133 aa7.62□□□□□ -1.19
LINC00342-202ENST00000448494 CNOT1A5YKK6 2376 aaKnown RBP7.62□□□□□ -1.19
LINC00342-202ENST00000448494 FRYQ5TBA9 3013 aa7.61□□□□□ -1.19
LINC00342-202ENST00000448494 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
LINC00342-202ENST00000448494 SMIM1B2RUZ4 78 aa7.61□□□□□ -1.19
LINC00342-202ENST00000448494 HAMPP81172 84 aa7.61□□□□□ -1.19
LINC00342-202ENST00000448494 CLEC19AQ6UXS0 136 aa7.61□□□□□ -1.19
LINC00342-202ENST00000448494 CHCHD7Q9BUK0 85 aa7.61□□□□□ -1.19
LINC00342-202ENST00000448494 FASNP49327 2511 aaKnown RBP7.61□□□□□ -1.19
LINC00342-202ENST00000448494 IGHV3-16A0A0C4DH30 117 aa7.6□□□□□ -1.19
LINC00342-202ENST00000448494 C19orf54Q5BKX5 351 aa7.6□□□□□ -1.19
LINC00342-202ENST00000448494 Q6ZQT0 140 aa7.6□□□□□ -1.19
LINC00342-202ENST00000448494 BBC3Q96PG8 261 aaPredicted RBP7.6□□□□□ -1.19
LINC00342-202ENST00000448494 SPEGQ15772 3267 aa7.6□□□□□ -1.19
LINC00342-202ENST00000448494 Q6ZTI0 123 aa7.6□□□□□ -1.19
LINC00342-202ENST00000448494 ZFYVE26Q68DK2 2539 aa7.59□□□□□ -1.19
LINC00342-202ENST00000448494 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
LINC00342-202ENST00000448494 TRAV22A0A0B4J277 110 aa7.59□□□□□ -1.19
LINC00342-202ENST00000448494 COX6A2Q02221 97 aa7.59□□□□□ -1.19
LINC00342-202ENST00000448494 BPY2O14599 106 aa7.59□□□□□ -1.2
LINC00342-202ENST00000448494 COX7A1P24310 79 aa7.59□□□□□ -1.2
LINC00342-202ENST00000448494 LY6G6DO95868 133 aa7.58□□□□□ -1.2
LINC00342-202ENST00000448494 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms