RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 C11orf72Q8NBR9 251 aa11.65□□□□□ -0.54
NLE1-202ENST00000442241 C9JAW5 83 aa11.64□□□□□ -0.55
NLE1-202ENST00000442241 TMEM223A0PJW6 202 aa11.64□□□□□ -0.55
NLE1-202ENST00000442241 CCL24O00175 119 aa11.64□□□□□ -0.55
NLE1-202ENST00000442241 IGHV3-33P01772 117 aa11.64□□□□□ -0.55
NLE1-202ENST00000442241 STHQ8IWL8 128 aa11.63□□□□□ -0.55
NLE1-202ENST00000442241 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
NLE1-202ENST00000442241 YAE1D1Q9NRH1 226 aa11.63□□□□□ -0.55
NLE1-202ENST00000442241 INSP01308 110 aa11.63□□□□□ -0.55
NLE1-202ENST00000442241 TMEM263Q8WUH6 116 aaKnown RBP11.63□□□□□ -0.55
NLE1-202ENST00000442241 LINC00467Q9BRT7 94 aa11.63□□□□□ -0.55
NLE1-202ENST00000442241 FASNP49327 2511 aaKnown RBP11.62□□□□□ -0.55
NLE1-202ENST00000442241 TRAV2A0A0B4J234 112 aa11.62□□□□□ -0.55
NLE1-202ENST00000442241 A4D1N5 150 aa11.62□□□□□ -0.55
NLE1-202ENST00000442241 B5MCH6 92 aa11.62□□□□□ -0.55
NLE1-202ENST00000442241 H7C2G1 150 aa11.62□□□□□ -0.55
NLE1-202ENST00000442241 TRGV1A0A0A0MS02 117 aa11.62□□□□□ -0.55
NLE1-202ENST00000442241 PLA2G2AP14555 144 aa11.62□□□□□ -0.55
NLE1-202ENST00000442241 NDUFV3P56181 108 aaKnown RBP11.62□□□□□ -0.55
NLE1-202ENST00000442241 A0A0B4J2C4 111 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 A8MTW9 85 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 C1orf158Q8N1D5 194 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 CHCHD7Q9BUK0 85 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 NPC2P61916 151 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 GAGE2BQ13066 116 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 GAGE2EQ4V326 116 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 GAGE2DQ9UEU5 116 aa11.61□□□□□ -0.55
NLE1-202ENST00000442241 SMR3AQ99954 134 aa11.6□□□□□ -0.55
NLE1-202ENST00000442241 CRLF1O75462 422 aa11.6□□□□□ -0.55
NLE1-202ENST00000442241 SNCGO76070 127 aa11.6□□□□□ -0.55
NLE1-202ENST00000442241 NOTCH2Q04721 2471 aa11.59□□□□□ -0.55
NLE1-202ENST00000442241 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
NLE1-202ENST00000442241 Q6Q795 121 aa11.59□□□□□ -0.55
NLE1-202ENST00000442241 Q6ZTI0 123 aa11.59□□□□□ -0.55
NLE1-202ENST00000442241 NBEAL2Q6ZNJ1 2754 aa11.59□□□□□ -0.55
NLE1-202ENST00000442241 LEPROTO15243 131 aa11.59□□□□□ -0.55
NLE1-202ENST00000442241 NDUFA7O95182 113 aa11.58□□□□□ -0.56
NLE1-202ENST00000442241 RPL13AP40429 203 aaKnown RBP11.58□□□□□ -0.56
NLE1-202ENST00000442241 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
NLE1-202ENST00000442241 HECTD1Q9ULT8 2610 aa11.58□□□□□ -0.56
NLE1-202ENST00000442241 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.56
NLE1-202ENST00000442241 KRTAP1-1Q07627 177 aa11.58□□□□□ -0.56
NLE1-202ENST00000442241 LINC01006Q8NI28 216 aa11.58□□□□□ -0.56
NLE1-202ENST00000442241 UNC79Q9P2D8 2635 aa11.57□□□□□ -0.56
NLE1-202ENST00000442241 LINC01620Q4KN68 170 aa11.57□□□□□ -0.56
NLE1-202ENST00000442241 UBE2D4Q9Y2X8 147 aa11.57□□□□□ -0.56
NLE1-202ENST00000442241 FN1P02751 2386 aaKnown RBP11.57□□□□□ -0.56
NLE1-202ENST00000442241 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
NLE1-202ENST00000442241 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 GAGE7O76087 117 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 GAGE12FP0CL80 117 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 GAGE12GP0CL81 117 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 GAGE12IP0CL82 117 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 GAGE4Q13068 117 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 ATXN8Q156A1 80 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
NLE1-202ENST00000442241 IFITM1P13164 125 aa11.55□□□□□ -0.56
NLE1-202ENST00000442241 NOP10Q9NPE3 64 aaKnown RBP11.55□□□□□ -0.56
NLE1-202ENST00000442241 VWFP04275 2813 aa11.55□□□□□ -0.56
NLE1-202ENST00000442241 TEX49A0A1B0GTD5 131 aa11.55□□□□□ -0.56
NLE1-202ENST00000442241 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
NLE1-202ENST00000442241 LINC00694P0DN24 101 aa11.55□□□□□ -0.56
NLE1-202ENST00000442241 GCN1Q92616 2671 aaKnown RBP11.54□□□□□ -0.56
NLE1-202ENST00000442241 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.54□□□□□ -0.56
NLE1-202ENST00000442241 PRSS2P07478 247 aa11.54□□□□□ -0.56
NLE1-202ENST00000442241 A0A0J9YXY3 114 aa11.54□□□□□ -0.56
NLE1-202ENST00000442241 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
NLE1-202ENST00000442241 RS1O15537 224 aa11.54□□□□□ -0.56
NLE1-202ENST00000442241 TMEM86BQ8N661 226 aa11.54□□□□□ -0.56
NLE1-202ENST00000442241 DAND5Q8N907 189 aa11.54□□□□□ -0.56
NLE1-202ENST00000442241 TRBV10-2A0A0K0K1G8 114 aa11.53□□□□□ -0.56
NLE1-202ENST00000442241 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
NLE1-202ENST00000442241 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.53□□□□□ -0.56
NLE1-202ENST00000442241 MRPS36P82909 103 aaKnown RBP11.53□□□□□ -0.56
NLE1-202ENST00000442241 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
NLE1-202ENST00000442241 ADAMTSL4-AS1Q5T5F5 129 aa11.53□□□□□ -0.56
NLE1-202ENST00000442241 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
NLE1-202ENST00000442241 COX6A2Q02221 97 aa11.52□□□□□ -0.56
NLE1-202ENST00000442241 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.57
NLE1-202ENST00000442241 LOC100131303A0A0U1RQF7 123 aa11.52□□□□□ -0.57
NLE1-202ENST00000442241 A0A0U1RRA0 63 aa11.52□□□□□ -0.57
NLE1-202ENST00000442241 CDKN2A-AS1Q9UH64 79 aa11.52□□□□□ -0.57
NLE1-202ENST00000442241 TRIAP1O43715 76 aa11.51□□□□□ -0.57
NLE1-202ENST00000442241 GIG44P09565 113 aaPredicted RBP11.51□□□□□ -0.57
NLE1-202ENST00000442241 DGAT2L7PQ6IED9 249 aa11.51□□□□□ -0.57
NLE1-202ENST00000442241 EDA2RQ9HAV5 297 aa11.51□□□□□ -0.57
NLE1-202ENST00000442241 Q1RN00 199 aa11.51□□□□□ -0.57
NLE1-202ENST00000442241 C15orf53Q8NAA6 179 aa11.51□□□□□ -0.57
NLE1-202ENST00000442241 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
NLE1-202ENST00000442241 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
NLE1-202ENST00000442241 NDUFA12Q9UI09 145 aa11.5□□□□□ -0.57
NLE1-202ENST00000442241 HIVEP2P31629 2446 aa11.5□□□□□ -0.57
NLE1-202ENST00000442241 LITAFQ99732 161 aa11.5□□□□□ -0.57
NLE1-202ENST00000442241 FAM110AQ9BQ89 295 aa11.5□□□□□ -0.57
NLE1-202ENST00000442241 NTM-AS1Q6ZSK4 140 aa11.49□□□□□ -0.57
NLE1-202ENST00000442241 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
NLE1-202ENST00000442241 IGHV1-58A0A0C4DH39 117 aa11.48□□□□□ -0.57
NLE1-202ENST00000442241 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
NLE1-202ENST00000442241 SPANXA1Q9NS26 97 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms