RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 CSDC2Q9Y534 153 aaKnown RBP13.71□□□□□ -0.21
APTR-204ENST00000440088 IGLV4-69A0A075B6H9 119 aa13.71□□□□□ -0.22
APTR-204ENST00000440088 MRPS36P82909 103 aaKnown RBP13.71□□□□□ -0.22
APTR-204ENST00000440088 C11orf45Q8TAV5 145 aa13.71□□□□□ -0.22
APTR-204ENST00000440088 MRPL23Q16540 153 aaKnown RBP13.7□□□□□ -0.22
APTR-204ENST00000440088 ANKRD39Q53RE8 183 aa13.7□□□□□ -0.22
APTR-204ENST00000440088 Q6ZUT4 128 aa13.7□□□□□ -0.22
APTR-204ENST00000440088 A0A096LPF7 62 aa13.69□□□□□ -0.22
APTR-204ENST00000440088 KRTAP21-3Q3LHN1 58 aa13.69□□□□□ -0.22
APTR-204ENST00000440088 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
APTR-204ENST00000440088 UQCR10Q9UDW1 63 aa13.69□□□□□ -0.22
APTR-204ENST00000440088 RNASE13Q5GAN3 156 aaKnown RBP13.69□□□□□ -0.22
APTR-204ENST00000440088 ICOSQ9Y6W8 199 aa13.69□□□□□ -0.22
APTR-204ENST00000440088 CHCHD5Q9BSY4 110 aa13.68□□□□□ -0.22
APTR-204ENST00000440088 C11orf86A6NJI1 115 aa13.68□□□□□ -0.22
APTR-204ENST00000440088 LINC00587B1AMM8 73 aa13.68□□□□□ -0.22
APTR-204ENST00000440088 NANOS2P60321 138 aaKnown RBP13.68□□□□□ -0.22
APTR-204ENST00000440088 SH2D6Q7Z4S9 175 aa13.68□□□□□ -0.22
APTR-204ENST00000440088 C2orf88Q9BSF0 95 aa13.68□□□□□ -0.22
APTR-204ENST00000440088 TCTAP57738 103 aa13.67□□□□□ -0.22
APTR-204ENST00000440088 OR5A1Q8NGJ0 315 aa13.67□□□□□ -0.22
APTR-204ENST00000440088 TMEM101Q96IK0 257 aa13.67□□□□□ -0.22
APTR-204ENST00000440088 ZNF25P17030 456 aaPredicted RBP13.66□□□□□ -0.22
APTR-204ENST00000440088 H3BNG1 76 aa13.66□□□□□ -0.22
APTR-204ENST00000440088 NFE4Q86UQ8 179 aa13.66□□□□□ -0.22
APTR-204ENST00000440088 GAGE6Q13070 117 aa13.65□□□□□ -0.22
APTR-204ENST00000440088 CHAC1Q9BUX1 264 aa13.65□□□□□ -0.22
APTR-204ENST00000440088 COX8AP10176 69 aa13.64□□□□□ -0.23
APTR-204ENST00000440088 NMUP48645 174 aa13.64□□□□□ -0.23
APTR-204ENST00000440088 SLC25A34Q6PIV7 304 aa13.64□□□□□ -0.23
APTR-204ENST00000440088 CDC42SE2Q9NRR3 84 aa13.64□□□□□ -0.23
APTR-204ENST00000440088 A0A0J9YXV3 536 aa13.63□□□□□ -0.23
APTR-204ENST00000440088 B9D2Q9BPU9 175 aa13.63□□□□□ -0.23
APTR-204ENST00000440088 HUWE1Q7Z6Z7 4374 aaKnown RBP13.63□□□□□ -0.23
APTR-204ENST00000440088 DEFB131BA0A096LNP1 70 aa13.63□□□□□ -0.23
APTR-204ENST00000440088 TMEM170BQ5T4T1 132 aa13.63□□□□□ -0.23
APTR-204ENST00000440088 IGKV2D-26A0A0A0MRZ7 120 aa13.62□□□□□ -0.23
APTR-204ENST00000440088 DNHD1Q96M86 4753 aa13.61□□□□□ -0.23
APTR-204ENST00000440088 UBE2D1P51668 147 aa13.61□□□□□ -0.23
APTR-204ENST00000440088 TINCRA0A1B0GVN0 87 aa13.6□□□□□ -0.23
APTR-204ENST00000440088 HNRNPA3P51991 378 aaKnown RBP13.6□□□□□ -0.23
APTR-204ENST00000440088 HERVK_113P61574 105 aa13.6□□□□□ -0.23
APTR-204ENST00000440088 DEFA6Q01524 100 aa13.6□□□□□ -0.23
APTR-204ENST00000440088 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
APTR-204ENST00000440088 TP73-AS1Q9UF72 201 aa13.59□□□□□ -0.23
APTR-204ENST00000440088 E9PLD3 99 aa13.59□□□□□ -0.23
APTR-204ENST00000440088 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
APTR-204ENST00000440088 PCP2Q8IVA1 136 aa13.59□□□□□ -0.23
APTR-204ENST00000440088 BOD1L2Q8IYS8 172 aa13.59□□□□□ -0.23
APTR-204ENST00000440088 IGLV4-60A0A075B6I1 120 aa13.58□□□□□ -0.24
APTR-204ENST00000440088 A0A1B0GUV1 79 aa13.58□□□□□ -0.24
APTR-204ENST00000440088 LELP1Q5T871 98 aa13.58□□□□□ -0.24
APTR-204ENST00000440088 TRAV10A0A0B4J240 114 aa13.57□□□□□ -0.24
APTR-204ENST00000440088 TRAV13-1A0A0B4J241 112 aa13.57□□□□□ -0.24
APTR-204ENST00000440088 DLEU1O43261 78 aa13.57□□□□□ -0.24
APTR-204ENST00000440088 GEMIN7Q9H840 131 aaKnown RBP13.57□□□□□ -0.24
APTR-204ENST00000440088 SEC11AP67812 179 aa13.56□□□□□ -0.24
APTR-204ENST00000440088 MPV17L2Q567V2 206 aa13.56□□□□□ -0.24
APTR-204ENST00000440088 TRAV8-6A0A0B4J262 113 aa13.56□□□□□ -0.24
APTR-204ENST00000440088 RBX1P62877 108 aa13.56□□□□□ -0.24
APTR-204ENST00000440088 FAM19A3Q7Z5A8 133 aa13.56□□□□□ -0.24
APTR-204ENST00000440088 TMEM223A0PJW6 202 aa13.55□□□□□ -0.24
APTR-204ENST00000440088 TIRAPP58753 221 aa13.55□□□□□ -0.24
APTR-204ENST00000440088 LYPD5Q6UWN5 251 aa13.55□□□□□ -0.24
APTR-204ENST00000440088 MRPS16Q9Y3D3 137 aaKnown RBP13.55□□□□□ -0.24
APTR-204ENST00000440088 HERVK_113P63121 156 aa13.54□□□□□ -0.24
APTR-204ENST00000440088 CTAG1AP78358 180 aa13.54□□□□□ -0.24
APTR-204ENST00000440088 LINC00242Q5T6M2 205 aa13.54□□□□□ -0.24
APTR-204ENST00000440088 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
APTR-204ENST00000440088 LINC00469Q8N7U9 141 aa13.54□□□□□ -0.24
APTR-204ENST00000440088 DNAH9Q9NYC9 4486 aa13.53□□□□□ -0.24
APTR-204ENST00000440088 COL7A1Q02388 2944 aa13.52□□□□□ -0.25
APTR-204ENST00000440088 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.25
APTR-204ENST00000440088 CDKN2A-AS1Q9UH64 79 aa13.51□□□□□ -0.25
APTR-204ENST00000440088 IGKV3OR2-268A0A0C4DH90 116 aa13.51□□□□□ -0.25
APTR-204ENST00000440088 H3BRM9 83 aa13.51□□□□□ -0.25
APTR-204ENST00000440088 SIVA1O15304 175 aa13.51□□□□□ -0.25
APTR-204ENST00000440088 NHLRC4P0CG21 123 aaPredicted RBP13.51□□□□□ -0.25
APTR-204ENST00000440088 COX6A2Q02221 97 aa13.51□□□□□ -0.25
APTR-204ENST00000440088 C2orf91Q6ZV80 131 aa13.51□□□□□ -0.25
APTR-204ENST00000440088 MAPKAPK5-AS1Q8N8E1 139 aa13.49□□□□□ -0.25
APTR-204ENST00000440088 C15orf53Q8NAA6 179 aa13.49□□□□□ -0.25
APTR-204ENST00000440088 STAB2Q8WWQ8 2551 aa13.49□□□□□ -0.25
APTR-204ENST00000440088 LEPROTO15243 131 aa13.49□□□□□ -0.25
APTR-204ENST00000440088 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
APTR-204ENST00000440088 MYMXA0A1B0GTQ4 84 aa13.48□□□□□ -0.25
APTR-204ENST00000440088 J3QQQ9 107 aa13.48□□□□□ -0.25
APTR-204ENST00000440088 ANGP03950 147 aaKnown RBP13.47□□□□□ -0.25
APTR-204ENST00000440088 IGHV1-58A0A0C4DH39 117 aa13.47□□□□□ -0.25
APTR-204ENST00000440088 LINC00959A0A1B0GUT2 108 aa13.47□□□□□ -0.25
APTR-204ENST00000440088 M0R143 59 aa13.47□□□□□ -0.25
APTR-204ENST00000440088 SPINK8P0C7L1 97 aa13.47□□□□□ -0.25
APTR-204ENST00000440088 LGALS3P17931 250 aaKnown RBP13.47□□□□□ -0.25
APTR-204ENST00000440088 Q8N3U1 123 aa13.47□□□□□ -0.25
APTR-204ENST00000440088 PLEKHB2Q96CS7 222 aa13.47□□□□□ -0.25
APTR-204ENST00000440088 TRAV8-3A0A0A6YYJ7 113 aa13.46□□□□□ -0.25
APTR-204ENST00000440088 ZNF815PA8K554 130 aa13.46□□□□□ -0.25
APTR-204ENST00000440088 IGHV3-30-3P0DP02 117 aa13.46□□□□□ -0.25
APTR-204ENST00000440088 TSPEAR-AS2P59090 65 aa13.46□□□□□ -0.25
APTR-204ENST00000440088 ESRGQ1W209 222 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms