RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LINC00959A0A1B0GUT2 108 aa11.71□□□□□ -0.53
AC004540.1-201ENST00000439120 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.53
AC004540.1-201ENST00000439120 FCER1GP30273 86 aa11.71□□□□□ -0.53
AC004540.1-201ENST00000439120 MAJINQ3KP22 176 aa11.71□□□□□ -0.53
AC004540.1-201ENST00000439120 PKIGQ9Y2B9 76 aa11.71□□□□□ -0.53
AC004540.1-201ENST00000439120 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
AC004540.1-201ENST00000439120 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
AC004540.1-201ENST00000439120 PPP1R17O96001 155 aa11.7□□□□□ -0.54
AC004540.1-201ENST00000439120 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
AC004540.1-201ENST00000439120 TMEM241Q24JQ0 296 aa11.7□□□□□ -0.54
AC004540.1-201ENST00000439120 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
AC004540.1-201ENST00000439120 PLAC8Q9NZF1 115 aa11.7□□□□□ -0.54
AC004540.1-201ENST00000439120 SMKR1H3BMG3 65 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 VCYO14598 125 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 Q6ZRU5 148 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 ZNF664Q8N3J9 261 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 NAT8BQ9UHF3 227 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 V9GYV3 84 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 PKHD1L1Q86WI1 4243 aa11.69□□□□□ -0.54
AC004540.1-201ENST00000439120 ADIRFQ15847 76 aa11.68□□□□□ -0.54
AC004540.1-201ENST00000439120 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
AC004540.1-201ENST00000439120 KIR2DL4Q99706 377 aa11.68□□□□□ -0.54
AC004540.1-201ENST00000439120 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
AC004540.1-201ENST00000439120 FAT3Q8TDW7 4589 aa11.67□□□□□ -0.54
AC004540.1-201ENST00000439120 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
AC004540.1-201ENST00000439120 PHOX2AO14813 284 aa11.67□□□□□ -0.54
AC004540.1-201ENST00000439120 STPG4Q8N801 248 aa11.67□□□□□ -0.54
AC004540.1-201ENST00000439120 LINC00474Q9P2X8 69 aa11.67□□□□□ -0.54
AC004540.1-201ENST00000439120 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-201ENST00000439120 RPL23P62829 140 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-201ENST00000439120 CD164L2Q6UWJ8 174 aa11.66□□□□□ -0.54
AC004540.1-201ENST00000439120 CARD19Q96LW7 228 aa11.66□□□□□ -0.54
AC004540.1-201ENST00000439120 PLA2G2DQ9UNK4 145 aa11.66□□□□□ -0.54
AC004540.1-201ENST00000439120 PPP1R2P9O14990 202 aa11.65□□□□□ -0.54
AC004540.1-201ENST00000439120 MALP21145 153 aa11.65□□□□□ -0.54
AC004540.1-201ENST00000439120 LINC00526Q96FQ7 95 aa11.65□□□□□ -0.54
AC004540.1-201ENST00000439120 NAT8Q9UHE5 227 aa11.65□□□□□ -0.54
AC004540.1-201ENST00000439120 A0A096LNI7 61 aa11.64□□□□□ -0.55
AC004540.1-201ENST00000439120 C1orf196B1AJZ1 125 aa11.64□□□□□ -0.55
AC004540.1-201ENST00000439120 CAMPP49913 170 aa11.63□□□□□ -0.55
AC004540.1-201ENST00000439120 NRACQ8N912 160 aa11.63□□□□□ -0.55
AC004540.1-201ENST00000439120 TMEM18Q96B42 140 aa11.63□□□□□ -0.55
AC004540.1-201ENST00000439120 COX7A2LO14548 114 aa11.62□□□□□ -0.55
AC004540.1-201ENST00000439120 SYCNQ0VAF6 134 aa11.62□□□□□ -0.55
AC004540.1-201ENST00000439120 PEA15Q15121 130 aa11.62□□□□□ -0.55
AC004540.1-201ENST00000439120 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
AC004540.1-201ENST00000439120 FAM104BQ5XKR9 115 aa11.62□□□□□ -0.55
AC004540.1-201ENST00000439120 A0A1B0GW15 77 aa11.61□□□□□ -0.55
AC004540.1-201ENST00000439120 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
AC004540.1-201ENST00000439120 UBE2D4Q9Y2X8 147 aa11.61□□□□□ -0.55
AC004540.1-201ENST00000439120 CSDC2Q9Y534 153 aaKnown RBP11.61□□□□□ -0.55
AC004540.1-201ENST00000439120 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
AC004540.1-201ENST00000439120 SMIM27A0A1W2PRY6 76 aa11.6□□□□□ -0.55
AC004540.1-201ENST00000439120 LINC00862A6NCI5 91 aa11.6□□□□□ -0.55
AC004540.1-201ENST00000439120 CKS2P33552 79 aa11.6□□□□□ -0.55
AC004540.1-201ENST00000439120 A0A1B0GVG6 124 aa11.59□□□□□ -0.55
AC004540.1-201ENST00000439120 C9JQL5 133 aa11.59□□□□□ -0.55
AC004540.1-201ENST00000439120 TCAPO15273 167 aa11.59□□□□□ -0.55
AC004540.1-201ENST00000439120 S100A8P05109 93 aa11.59□□□□□ -0.55
AC004540.1-201ENST00000439120 PRR3P79522 188 aaKnown RBP11.59□□□□□ -0.55
AC004540.1-201ENST00000439120 C20orf78Q9BR46 151 aa11.59□□□□□ -0.55
AC004540.1-201ENST00000439120 IGLV4-69A0A075B6H9 119 aa11.58□□□□□ -0.56
AC004540.1-201ENST00000439120 SMDT1Q9H4I9 107 aa11.58□□□□□ -0.56
AC004540.1-201ENST00000439120 F8W036 122 aa11.57□□□□□ -0.56
AC004540.1-201ENST00000439120 APOMO95445 188 aa11.57□□□□□ -0.56
AC004540.1-201ENST00000439120 MT1HL1P0DM35 61 aa11.57□□□□□ -0.56
AC004540.1-201ENST00000439120 Q6ZUT4 128 aa11.57□□□□□ -0.56
AC004540.1-201ENST00000439120 CAMK2N2Q96S95 79 aa11.57□□□□□ -0.56
AC004540.1-201ENST00000439120 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
AC004540.1-201ENST00000439120 HBBP68871 147 aa11.56□□□□□ -0.56
AC004540.1-201ENST00000439120 SRSF3P84103 164 aaKnown RBP11.56□□□□□ -0.56
AC004540.1-201ENST00000439120 GAGE2BQ13066 116 aa11.56□□□□□ -0.56
AC004540.1-201ENST00000439120 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
AC004540.1-201ENST00000439120 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
AC004540.1-201ENST00000439120 TRBV24-1A0A075B6N3 115 aa11.55□□□□□ -0.56
AC004540.1-201ENST00000439120 TNFRSF6BO95407 300 aa11.55□□□□□ -0.56
AC004540.1-201ENST00000439120 RPL32P62910 135 aaKnown RBP11.55□□□□□ -0.56
AC004540.1-201ENST00000439120 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
AC004540.1-201ENST00000439120 D6R8Y8 96 aa11.54□□□□□ -0.56
AC004540.1-201ENST00000439120 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
AC004540.1-201ENST00000439120 SMIM2Q9BVW6 85 aa11.54□□□□□ -0.56
AC004540.1-201ENST00000439120 HMCN2Q8NDA2 5059 aa11.52□□□□□ -0.56
AC004540.1-201ENST00000439120 PPBPP02775 128 aa11.52□□□□□ -0.57
AC004540.1-201ENST00000439120 RPL39P62891 51 aaKnown RBP11.52□□□□□ -0.57
AC004540.1-201ENST00000439120 SPAG11BQ08648 103 aa11.52□□□□□ -0.57
AC004540.1-201ENST00000439120 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
AC004540.1-201ENST00000439120 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
AC004540.1-201ENST00000439120 RPL18AQ02543 176 aaKnown RBP11.51□□□□□ -0.57
AC004540.1-201ENST00000439120 Q6ZRP5 223 aa11.51□□□□□ -0.57
AC004540.1-201ENST00000439120 NPYP01303 97 aa11.5□□□□□ -0.57
AC004540.1-201ENST00000439120 SPINK6Q6UWN8 80 aa11.5□□□□□ -0.57
AC004540.1-201ENST00000439120 OR10D4PQ8NGN7 298 aa11.5□□□□□ -0.57
AC004540.1-201ENST00000439120 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
AC004540.1-201ENST00000439120 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
AC004540.1-201ENST00000439120 RAB5AP20339 215 aa11.49□□□□□ -0.57
AC004540.1-201ENST00000439120 REG3GQ6UW15 175 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms