RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TEN1Q86WV5 123 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 RNF183Q96D59 192 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 SPXQ9BT56 116 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 ERG28Q9UKR5 140 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 TNFRSF18Q9Y5U5 241 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 CIDEAO60543 219 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 FSHBP01225 129 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 IGKV3-20P01619 116 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 EDN2P20800 178 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 EMP1P54849 157 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 TSPEAR-AS2P59090 65 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 TMEM95Q3KNT9 176 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 TCTEX1D4Q5JR98 221 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 LINC01600Q96MT4 127 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 CLUHP3Q96NS8 147 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 DUX5Q96PT3 197 aa6.37□□□□□ -1.39
GABPB1-205ENST00000429662 A0A1B0GV72 72 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 TCL1BO95988 128 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 IGHV3-33P01772 117 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 CD28P10747 220 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 Q8N2B8 174 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
GABPB1-205ENST00000429662 TIMM21Q9BVV7 248 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 GTSF1LQ9H1H1 148 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 ZNF702PQ9H963 129 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
GABPB1-205ENST00000429662 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 A4D1N5 150 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 H3BMM0 161 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 TIMM17BO60830 172 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 TGFAP01135 160 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 SMAGPQ0VAQ4 97 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 TEX29Q8N6K0 151 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 RAX2Q96IS3 184 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 DUX3Q96PT4 197 aa6.35□□□□□ -1.39
GABPB1-205ENST00000429662 DYNC2H1Q8NCM8 4307 aaKnown RBP6.35□□□□□ -1.39
GABPB1-205ENST00000429662 MUC4Q99102 2169 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 A0A0J9YXY3 114 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 TRBV30A0A0K0K1B3 111 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 IFITM1P13164 125 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 TIRAPP58753 221 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 DEFB131AP59861 70 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 ATXN8Q156A1 80 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 ZNF418Q8TF45 676 aaPredicted RBP6.34□□□□□ -1.39
GABPB1-205ENST00000429662 C4orf3Q8WVX3 66 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 COPS9Q8WXC6 57 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
GABPB1-205ENST00000429662 TRAV25A0A0B4J276 109 aa6.33□□□□□ -1.4
GABPB1-205ENST00000429662 RS1O15537 224 aa6.33□□□□□ -1.4
GABPB1-205ENST00000429662 INSP01308 110 aa6.33□□□□□ -1.4
GABPB1-205ENST00000429662 IGHV3-53P01767 116 aa6.33□□□□□ -1.4
GABPB1-205ENST00000429662 IGHV3-30-3P0DP02 117 aa6.33□□□□□ -1.4
GABPB1-205ENST00000429662 C10orf99Q6UWK7 81 aa6.33□□□□□ -1.4
GABPB1-205ENST00000429662 OPRPNQ99935 248 aaPredicted RBP6.33□□□□□ -1.4
GABPB1-205ENST00000429662 AGRNO00468 2067 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 KNCNA6PVL3 124 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 SLC25A20O43772 301 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 COX6CP09669 75 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 CMC4P56277 68 aaPredicted RBP6.32□□□□□ -1.4
GABPB1-205ENST00000429662 TMEM86BQ8N661 226 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 DYNLRB2Q8TF09 96 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 VSIG2Q96IQ7 327 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 UBE2D4Q9Y2X8 147 aa6.32□□□□□ -1.4
GABPB1-205ENST00000429662 RBMY1A1P0DJD3 496 aaKnown RBP6.31□□□□□ -1.4
GABPB1-205ENST00000429662 RBMY1CP0DJD4 496 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 CIRBPQ14011 172 aaKnown RBP6.31□□□□□ -1.4
GABPB1-205ENST00000429662 RBMY1FQ15415 496 aaKnown RBP6.31□□□□□ -1.4
GABPB1-205ENST00000429662 MIAQ16674 131 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 Q1RN00 199 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 LINC01587Q99440 93 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 CHCHD7Q9BUK0 85 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 GEMIN7Q9H840 131 aaKnown RBP6.31□□□□□ -1.4
GABPB1-205ENST00000429662 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 IGLV5-45A0A087WSX0 123 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 INSL3P51460 131 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 SLURP1P55000 103 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 ZFAND6Q6FIF0 208 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 CARD19Q96LW7 228 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 LITAFQ99732 161 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
GABPB1-205ENST00000429662 TRBV10-1A0A0K0K1A3 114 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 TRBV10-2A0A0K0K1G8 114 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 C9JAW5 83 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 SPINK8P0C7L1 97 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 RPL13AP40429 203 aaKnown RBP6.3□□□□□ -1.4
GABPB1-205ENST00000429662 HERVK_113P63121 156 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 DEFB114Q30KQ6 69 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 LINC01620Q4KN68 170 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms