RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CADP27708 2225 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 IGKV2-28A0A075B6P5 120 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 IGKV2D-28P01615 120 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 ZNF702PQ9H963 129 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 PRAC2D3DTV9 90 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 C1orf137Q5JT78 98 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 Q8N9L7 120 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 C2CD3Q4AC94 2353 aa4.28□□□□□ -1.72
HERC4-206ENST00000427635 CACNA1DQ01668 2161 aa4.28□□□□□ -1.72
HERC4-206ENST00000427635 A0A1B0GXF2 115 aa4.28□□□□□ -1.72
HERC4-206ENST00000427635 RPL37AP8A6NKH3 93 aa4.28□□□□□ -1.72
HERC4-206ENST00000427635 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
HERC4-206ENST00000427635 K7EQG2 157 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 ZNF747Q9BV97 191 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 C2orf48Q96LS8 159 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 PI4KAP42356 2102 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 C1orf158Q8N1D5 194 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 ZNF726P1Q15940 193 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 C1orf229Q6ZS94 237 aaPredicted RBP4.27□□□□□ -1.73
HERC4-206ENST00000427635 PLA2G2EQ9NZK7 142 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 NAV2Q8IVL1 2488 aa4.27□□□□□ -1.73
HERC4-206ENST00000427635 VWA8A3KMH1 1905 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 HIVEP2P31629 2446 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 IBA57-AS1B1ANH7 110 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 IGLV1-47P01700 117 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 C20orf203Q8NBC4 194 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 XAGE1AQ9HD64 81 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 LST1O00453 97 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 SMR3AQ99954 134 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 PKDREJQ9NTG1 2253 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 H3BT86 120 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 DEFB1P60022 68 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 CLEC2BQ92478 149 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 LINC00467Q9BRT7 94 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 ARFGEF3Q5TH69 2177 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 SLPIP03973 132 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 FRMD6-AS1P0C7T7 363 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 ADCYAP1P18509 176 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 ADAMTS9Q9P2N4 1935 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 KRTAP27-1Q3LI81 207 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 CFAP126Q5VTH2 177 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 LINC00526Q96FQ7 95 aa4.26□□□□□ -1.73
HERC4-206ENST00000427635 IGLV2-14P01704 120 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
HERC4-206ENST00000427635 TIMM17BO60830 172 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 IGLV3-1P01715 115 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 KIF26BQ2KJY2 2108 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 FREM3P0C091 2139 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 ZFYVE26Q68DK2 2539 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 RLFQ13129 1914 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 PLXNA2O75051 1894 aa4.25□□□□□ -1.73
HERC4-206ENST00000427635 ESRGQ1W209 222 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 C6orf99Q4VX62 202 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 CEMP1Q6PRD7 247 aaPredicted RBP4.24□□□□□ -1.73
HERC4-206ENST00000427635 NACAE9PAV3 2078 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 FSTL3O95633 263 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 P0C879 139 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 PTPRDP23468 1912 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 CCKP06307 115 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 C11orf71Q6IPW1 123 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 RETNLBQ9BQ08 111 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 C3orf84H3BNL1 204 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 CXCL6P80162 114 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 COX17Q14061 63 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 MRGPRG-AS1Q2M3A8 158 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 WFDC13Q8IUB5 93 aa4.24□□□□□ -1.73
HERC4-206ENST00000427635 PLCE1Q9P212 2302 aa4.23□□□□□ -1.73
HERC4-206ENST00000427635 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
HERC4-206ENST00000427635 RSPO1Q2MKA7 263 aaPredicted RBP4.23□□□□□ -1.73
HERC4-206ENST00000427635 SCXQ7RTU7 201 aa4.23□□□□□ -1.73
HERC4-206ENST00000427635 A0A1W2PNU3 283 aaPredicted RBP4.23□□□□□ -1.73
HERC4-206ENST00000427635 C16orf95Q9H693 158 aa4.23□□□□□ -1.73
HERC4-206ENST00000427635 MRPS12O15235 138 aaKnown RBP4.23□□□□□ -1.73
HERC4-206ENST00000427635 ATP5EP56381 51 aaPredicted RBP4.23□□□□□ -1.73
HERC4-206ENST00000427635 ANKRD11Q6UB99 2663 aaPredicted RBP4.23□□□□□ -1.73
HERC4-206ENST00000427635 KIF26AQ9ULI4 1882 aaPredicted RBP4.23□□□□□ -1.73
HERC4-206ENST00000427635 ATP5EP2Q5VTU8 51 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 MUC7Q8TAX7 377 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 JMJD1CQ15652 2540 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 TRBV30A0A0K0K1B3 111 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 PATE2Q6UY27 113 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 SPRY4Q9C004 299 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 OBSL1O75147 1896 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 MPDZO75970 2070 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 LOC100131303A0A0U1RQF7 123 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 C16orf90A8MZG2 172 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 COX7CP15954 63 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 HELZP42694 1942 aaKnown RBP4.22□□□□□ -1.73
HERC4-206ENST00000427635 E7EUB6 86 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 EML6Q6ZMW3 1958 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 POLQO75417 2590 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 SRCAPQ6ZRS2 3230 aa4.22□□□□□ -1.73
HERC4-206ENST00000427635 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms