RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PIK3CD-AS1Q5SR53 167 aa8.26□□□□□ -1.09
SEC61A1-202ENST00000424880 VSIG2Q96IQ7 327 aa8.26□□□□□ -1.09
SEC61A1-202ENST00000424880 HIVEP3Q5T1R4 2406 aa8.26□□□□□ -1.09
SEC61A1-202ENST00000424880 SOCS3O14543 225 aa8.25□□□□□ -1.09
SEC61A1-202ENST00000424880 WFDC9Q8NEX5 89 aa8.25□□□□□ -1.09
SEC61A1-202ENST00000424880 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
SEC61A1-202ENST00000424880 MINOS1Q5TGZ0 78 aa8.25□□□□□ -1.09
SEC61A1-202ENST00000424880 UPK3BQ9BT76 320 aa8.25□□□□□ -1.09
SEC61A1-202ENST00000424880 Q9H8V8 135 aa8.25□□□□□ -1.09
SEC61A1-202ENST00000424880 IGHV3-16A0A0C4DH30 117 aa8.24□□□□□ -1.09
SEC61A1-202ENST00000424880 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
SEC61A1-202ENST00000424880 BRD3OSQ6XYD6 125 aa8.24□□□□□ -1.09
SEC61A1-202ENST00000424880 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
SEC61A1-202ENST00000424880 COX6A2Q02221 97 aa8.24□□□□□ -1.09
SEC61A1-202ENST00000424880 C10orf105Q8TEF2 133 aa8.24□□□□□ -1.09
SEC61A1-202ENST00000424880 TRBV6-5A0A0K0K1A5 114 aa8.23□□□□□ -1.09
SEC61A1-202ENST00000424880 NIPBLQ6KC79 2804 aaeCLIP8.23□□□□□ -1.093e-6■■■■□ 23.8
SEC61A1-202ENST00000424880 FBXL19-AS1Q494R0 122 aa8.23□□□□□ -1.09
SEC61A1-202ENST00000424880 AKAP9Q99996 3911 aa8.23□□□□□ -1.09
SEC61A1-202ENST00000424880 SETD2Q9BYW2 2564 aaPredicted RBP8.23□□□□□ -1.09
SEC61A1-202ENST00000424880 CFAP46Q8IYW2 2715 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 LINC00308Q8TCZ7 52 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 FAM19A4Q96LR4 140 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 ZFYVE26Q68DK2 2539 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 WNK1Q9H4A3 2382 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 Q6ZSN1 163 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 ZANQ9Y493 2812 aa8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 RPL18AQ02543 176 aaKnown RBP8.22□□□□□ -1.09
SEC61A1-202ENST00000424880 KLLNB2CW77 178 aa8.21□□□□□ -1.09
SEC61A1-202ENST00000424880 COX7A2LO14548 114 aa8.21□□□□□ -1.09
SEC61A1-202ENST00000424880 BBC3Q96PG8 261 aaPredicted RBP8.21□□□□□ -1.1
SEC61A1-202ENST00000424880 LINC00467Q9BRT7 94 aa8.21□□□□□ -1.1
SEC61A1-202ENST00000424880 IGSF10Q6WRI0 2623 aa8.21□□□□□ -1.1
SEC61A1-202ENST00000424880 SLPIP03973 132 aa8.2□□□□□ -1.1
SEC61A1-202ENST00000424880 APRG1Q8IVJ8 170 aa8.2□□□□□ -1.1
SEC61A1-202ENST00000424880 HILS1P60008 231 aa8.2□□□□□ -1.1
SEC61A1-202ENST00000424880 CIRBPQ14011 172 aaKnown RBP8.2□□□□□ -1.1
SEC61A1-202ENST00000424880 SERP2Q8N6R1 65 aa8.2□□□□□ -1.1
SEC61A1-202ENST00000424880 FAM208BQ5VWN6 2430 aa8.2□□□□□ -1.1
SEC61A1-202ENST00000424880 BLCAPP62952 87 aa8.19□□□□□ -1.1
SEC61A1-202ENST00000424880 LINC00846Q9NV44 126 aa8.19□□□□□ -1.1
SEC61A1-202ENST00000424880 JMJD1CQ15652 2540 aa8.19□□□□□ -1.1
SEC61A1-202ENST00000424880 BEAN1Q3B7T3 259 aa8.19□□□□□ -1.1
SEC61A1-202ENST00000424880 C5orf56Q8N8D9 126 aa8.19□□□□□ -1.1
SEC61A1-202ENST00000424880 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
SEC61A1-202ENST00000424880 F8WDY8 70 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 FAM222AQ5U5X8 452 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 CENPEQ02224 2701 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 A0A1W2PPR1 153 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 NCR3O14931 201 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 DNAL4O96015 105 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 KLK9Q2XQG4 91 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 SONP18583 2426 aaKnown RBP8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 A0A087WYN8 130 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 DGAT2L7PQ6IED9 249 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 PRIMA1Q86XR5 153 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 FAM223AQ8IWN6 122 aa8.18□□□□□ -1.1
SEC61A1-202ENST00000424880 FBN2P35556 2912 aa8.17□□□□□ -1.1
SEC61A1-202ENST00000424880 TIMM17BO60830 172 aa8.17□□□□□ -1.1
SEC61A1-202ENST00000424880 C10orf99Q6UWK7 81 aa8.17□□□□□ -1.1
SEC61A1-202ENST00000424880 C9orf85Q96MD7 179 aa8.17□□□□□ -1.1
SEC61A1-202ENST00000424880 MYO9AB2RTY4 2548 aa8.17□□□□□ -1.1
SEC61A1-202ENST00000424880 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
SEC61A1-202ENST00000424880 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
SEC61A1-202ENST00000424880 PRB1P04280 392 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 MALP21145 153 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 LINC01561Q8N1V8 128 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 RBMY1A1P0DJD3 496 aaKnown RBP8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 RBMY1CP0DJD4 496 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 PRO0628Q9UI54 55 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 NDUFA4O00483 81 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 FHL2Q14192 279 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 ZNF843Q8N446 348 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 SIRPDQ9H106 197 aa8.16□□□□□ -1.1
SEC61A1-202ENST00000424880 USP9YO00507 2555 aaPredicted RBP8.15□□□□□ -1.1
SEC61A1-202ENST00000424880 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.1
SEC61A1-202ENST00000424880 NDUFC2-KCTD14E9PQ53 114 aa8.15□□□□□ -1.1
SEC61A1-202ENST00000424880 HIST2H2BDQ6DRA6 164 aa8.15□□□□□ -1.1
SEC61A1-202ENST00000424880 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
SEC61A1-202ENST00000424880 MINOS1-NBL1R4GNA1 71 aa8.15□□□□□ -1.1
SEC61A1-202ENST00000424880 EPM2AB3EWF7 344 aa8.15□□□□□ -1.11
SEC61A1-202ENST00000424880 FLNCQ14315 2725 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 FAM223BA6NKX1 122 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 RNASE1P07998 156 aaKnown RBP8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 PLA2G2AP14555 144 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 CFHR3Q02985 330 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 ABCA2Q9BZC7 2435 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 Q6JHZ5 121 aa8.14□□□□□ -1.11
SEC61A1-202ENST00000424880 C11orf71Q6IPW1 123 aa8.13□□□□□ -1.11
SEC61A1-202ENST00000424880 UTP20O75691 2785 aaKnown RBP8.13□□□□□ -1.11
SEC61A1-202ENST00000424880 PIMREGQ9BSJ6 248 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms