RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 DNAJC9-AS1A6NH13 148 aa9.94□□□□□ -0.82
CTCFL-203ENST00000422109 Q6ZTI0 123 aa9.94□□□□□ -0.82
CTCFL-203ENST00000422109 TMEM263Q8WUH6 116 aaKnown RBP9.94□□□□□ -0.82
CTCFL-203ENST00000422109 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
CTCFL-203ENST00000422109 HERV-K104P63124 156 aa9.94□□□□□ -0.82
CTCFL-203ENST00000422109 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
CTCFL-203ENST00000422109 GAGE4Q13068 117 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 GAGE5Q13069 117 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 LYRM7Q5U5X0 104 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 ANKRD29Q8N6D5 301 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 CITED2Q99967 270 aaPredicted RBP9.93□□□□□ -0.82
CTCFL-203ENST00000422109 COX6A2Q02221 97 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 C1orf158Q8N1D5 194 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 CCL24O00175 119 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 FHL3Q13643 280 aa9.93□□□□□ -0.82
CTCFL-203ENST00000422109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.93□□□□□ -0.82
CTCFL-203ENST00000422109 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
CTCFL-203ENST00000422109 ITPR2Q14571 2701 aa9.92□□□□□ -0.82
CTCFL-203ENST00000422109 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
CTCFL-203ENST00000422109 VSIG2Q96IQ7 327 aa9.91□□□□□ -0.82
CTCFL-203ENST00000422109 SLC25A20O43772 301 aa9.91□□□□□ -0.82
CTCFL-203ENST00000422109 KRTAP1-3Q8IUG1 177 aa9.9□□□□□ -0.82
CTCFL-203ENST00000422109 Q8N2B8 174 aa9.9□□□□□ -0.82
CTCFL-203ENST00000422109 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.82
CTCFL-203ENST00000422109 NBEAL2Q6ZNJ1 2754 aa9.9□□□□□ -0.82
CTCFL-203ENST00000422109 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.83
CTCFL-203ENST00000422109 CKS1BP61024 79 aa9.9□□□□□ -0.83
CTCFL-203ENST00000422109 TEN1Q86WV5 123 aa9.9□□□□□ -0.83
CTCFL-203ENST00000422109 LITAFQ99732 161 aa9.9□□□□□ -0.83
CTCFL-203ENST00000422109 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.83
CTCFL-203ENST00000422109 LOC100131303A0A0U1RQF7 123 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 TRIAP1O43715 76 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 GAGE7O76087 117 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 GAGE12FP0CL80 117 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 GAGE12GP0CL81 117 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 GAGE12IP0CL82 117 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 TINCRA0A1B0GVN0 87 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 RS1O15537 224 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 MT-ATP8P03928 68 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 SCGB1A1P11684 91 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
CTCFL-203ENST00000422109 YAE1D1Q9NRH1 226 aa9.88□□□□□ -0.83
CTCFL-203ENST00000422109 TENM4Q6N022 2769 aa9.88□□□□□ -0.83
CTCFL-203ENST00000422109 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
CTCFL-203ENST00000422109 PPDPFLQ8WWR9 84 aa9.88□□□□□ -0.83
CTCFL-203ENST00000422109 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
CTCFL-203ENST00000422109 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
CTCFL-203ENST00000422109 A8MTW9 85 aa9.87□□□□□ -0.83
CTCFL-203ENST00000422109 NTN5Q8WTR8 489 aaPredicted RBP9.87□□□□□ -0.83
CTCFL-203ENST00000422109 CDIP1Q9H305 208 aa9.87□□□□□ -0.83
CTCFL-203ENST00000422109 Q9H8V8 135 aa9.87□□□□□ -0.83
CTCFL-203ENST00000422109 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
CTCFL-203ENST00000422109 GCN1Q92616 2671 aaKnown RBP9.86□□□□□ -0.83
CTCFL-203ENST00000422109 RPL36AP83881 106 aaKnown RBP9.86□□□□□ -0.83
CTCFL-203ENST00000422109 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
CTCFL-203ENST00000422109 NTM-AS1Q6ZSK4 140 aa9.86□□□□□ -0.83
CTCFL-203ENST00000422109 RPL36ALQ969Q0 106 aaKnown RBP9.86□□□□□ -0.83
CTCFL-203ENST00000422109 XGP55808 180 aa9.86□□□□□ -0.83
CTCFL-203ENST00000422109 HIVEP2P31629 2446 aa9.86□□□□□ -0.83
CTCFL-203ENST00000422109 RPL13AP40429 203 aaKnown RBP9.85□□□□□ -0.83
CTCFL-203ENST00000422109 MIAQ16674 131 aa9.85□□□□□ -0.83
CTCFL-203ENST00000422109 FASNP49327 2511 aaKnown RBP9.85□□□□□ -0.83
CTCFL-203ENST00000422109 K7EQD1 137 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 LINC01620Q4KN68 170 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 MEIG1Q5JSS6 88 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 EDA2RQ9HAV5 297 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 ICOSQ9Y6W8 199 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 ATXN8Q156A1 80 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
CTCFL-203ENST00000422109 ZFAND6Q6FIF0 208 aa9.83□□□□□ -0.84
CTCFL-203ENST00000422109 LINC01006Q8NI28 216 aa9.83□□□□□ -0.84
CTCFL-203ENST00000422109 UBE2L6O14933 153 aa9.83□□□□□ -0.84
CTCFL-203ENST00000422109 LRRC75A-AS1Q8N1F1 130 aa9.82□□□□□ -0.84
CTCFL-203ENST00000422109 HELZ2Q9BYK8 2649 aaKnown RBP9.82□□□□□ -0.84
CTCFL-203ENST00000422109 GAGE6Q13070 117 aa9.82□□□□□ -0.84
CTCFL-203ENST00000422109 PRIMA1Q86XR5 153 aa9.82□□□□□ -0.84
CTCFL-203ENST00000422109 TRGV4A0A0C4DH28 118 aa9.81□□□□□ -0.84
CTCFL-203ENST00000422109 SMR3AQ99954 134 aa9.81□□□□□ -0.84
CTCFL-203ENST00000422109 C2orf82Q6UX34 121 aa9.81□□□□□ -0.84
CTCFL-203ENST00000422109 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
CTCFL-203ENST00000422109 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
CTCFL-203ENST00000422109 SPANXDQ9BXN6 97 aa9.8□□□□□ -0.84
CTCFL-203ENST00000422109 SPANXCQ9NY87 97 aa9.8□□□□□ -0.84
CTCFL-203ENST00000422109 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-203ENST00000422109 CIRBPQ14011 172 aaKnown RBP9.8□□□□□ -0.84
CTCFL-203ENST00000422109 COX6CP09669 75 aa9.79□□□□□ -0.84
CTCFL-203ENST00000422109 HERVK_113P63121 156 aa9.79□□□□□ -0.84
CTCFL-203ENST00000422109 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
CTCFL-203ENST00000422109 SBSPONQ8IVN8 264 aa9.79□□□□□ -0.84
CTCFL-203ENST00000422109 HECTD1Q9ULT8 2610 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms