RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 FSHBP01225 129 aa9.65□□□□□ -0.86
MCF2L-213ENST00000421756 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
MCF2L-213ENST00000421756 C1orf158Q8N1D5 194 aa9.65□□□□□ -0.86
MCF2L-213ENST00000421756 NBEAL1Q6ZS30 2694 aa9.65□□□□□ -0.86
MCF2L-213ENST00000421756 TCL1BO95988 128 aa9.65□□□□□ -0.87
MCF2L-213ENST00000421756 TRBV6-5A0A0K0K1A5 114 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 TMEM223A0PJW6 202 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 EIF4EBP3O60516 100 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-213ENST00000421756 ADAMTSL4-AS1Q5T5F5 129 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 CLPSL2Q6UWE3 100 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 RHOHQ15669 191 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 TAL2Q16559 108 aa9.64□□□□□ -0.87
MCF2L-213ENST00000421756 C9JAW5 83 aa9.63□□□□□ -0.87
MCF2L-213ENST00000421756 COX6A2Q02221 97 aa9.63□□□□□ -0.87
MCF2L-213ENST00000421756 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
MCF2L-213ENST00000421756 ODF3Q96PU9 254 aa9.63□□□□□ -0.87
MCF2L-213ENST00000421756 PRO1854Q9UHT4 67 aa9.63□□□□□ -0.87
MCF2L-213ENST00000421756 GAGE6Q13070 117 aa9.62□□□□□ -0.87
MCF2L-213ENST00000421756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-213ENST00000421756 C11orf72Q8NBR9 251 aa9.62□□□□□ -0.87
MCF2L-213ENST00000421756 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-213ENST00000421756 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
MCF2L-213ENST00000421756 NFE4Q86UQ8 179 aa9.62□□□□□ -0.87
MCF2L-213ENST00000421756 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
MCF2L-213ENST00000421756 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
MCF2L-213ENST00000421756 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-213ENST00000421756 PF4P02776 101 aa9.61□□□□□ -0.87
MCF2L-213ENST00000421756 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
MCF2L-213ENST00000421756 LEPROTO15243 131 aa9.61□□□□□ -0.87
MCF2L-213ENST00000421756 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
MCF2L-213ENST00000421756 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
MCF2L-213ENST00000421756 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
MCF2L-213ENST00000421756 AMELXQ99217 191 aa9.6□□□□□ -0.87
MCF2L-213ENST00000421756 F8W1H4 67 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 UBE2L6O14933 153 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 SMCPP49901 116 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-213ENST00000421756 FAM104AQ969W3 186 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 A0A1B0GV72 72 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 UBE2D1P51668 147 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 RPL36AP83881 106 aaKnown RBP9.59□□□□□ -0.87
MCF2L-213ENST00000421756 SPATA3Q8NHX4 192 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 RPL36ALQ969Q0 106 aaKnown RBP9.59□□□□□ -0.87
MCF2L-213ENST00000421756 Q9H8V8 135 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 CLEC2BQ92478 149 aa9.59□□□□□ -0.87
MCF2L-213ENST00000421756 CHCHD5Q9BSY4 110 aa9.58□□□□□ -0.88
MCF2L-213ENST00000421756 FBN1P35555 2871 aaKnown RBP9.58□□□□□ -0.88
MCF2L-213ENST00000421756 GAGE12HA6NDE8 117 aa9.58□□□□□ -0.88
MCF2L-213ENST00000421756 HTN3P15516 51 aa9.58□□□□□ -0.88
MCF2L-213ENST00000421756 TMEM238C9JI98 176 aa9.57□□□□□ -0.88
MCF2L-213ENST00000421756 J3QR89 54 aa9.57□□□□□ -0.88
MCF2L-213ENST00000421756 CRLF1O75462 422 aa9.57□□□□□ -0.88
MCF2L-213ENST00000421756 RNF152Q8N8N0 203 aa9.57□□□□□ -0.88
MCF2L-213ENST00000421756 RPL32P62910 135 aaKnown RBP9.57□□□□□ -0.88
MCF2L-213ENST00000421756 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
MCF2L-213ENST00000421756 PRIMA1Q86XR5 153 aa9.56□□□□□ -0.88
MCF2L-213ENST00000421756 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
MCF2L-213ENST00000421756 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
MCF2L-213ENST00000421756 Q8N2B8 174 aa9.55□□□□□ -0.88
MCF2L-213ENST00000421756 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
MCF2L-213ENST00000421756 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
MCF2L-213ENST00000421756 K7EQD1 137 aa9.54□□□□□ -0.88
MCF2L-213ENST00000421756 VSIG2Q96IQ7 327 aa9.54□□□□□ -0.88
MCF2L-213ENST00000421756 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
MCF2L-213ENST00000421756 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
MCF2L-213ENST00000421756 SIGMAR1Q99720 223 aa9.54□□□□□ -0.88
MCF2L-213ENST00000421756 PRO0461Q9UI25 63 aa9.54□□□□□ -0.88
MCF2L-213ENST00000421756 PIK3CD-AS1Q5SR53 167 aa9.54□□□□□ -0.88
MCF2L-213ENST00000421756 J3QKU1 62 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 PFN2P35080 140 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 MRPS36P82909 103 aaKnown RBP9.53□□□□□ -0.88
MCF2L-213ENST00000421756 LRRC75A-AS1Q8N1F1 130 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 COL6A5A8TX70 2615 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 RS1O15537 224 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 TRIAP1O43715 76 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 SLC25A20O43772 301 aa9.53□□□□□ -0.88
MCF2L-213ENST00000421756 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-213ENST00000421756 RPL13AP40429 203 aaKnown RBP9.52□□□□□ -0.89
MCF2L-213ENST00000421756 FOXI1Q12951 378 aa9.52□□□□□ -0.89
MCF2L-213ENST00000421756 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-213ENST00000421756 LINC00242Q5T6M2 205 aa9.52□□□□□ -0.89
MCF2L-213ENST00000421756 IGLV10-54A0A075B6I4 117 aa9.51□□□□□ -0.89
MCF2L-213ENST00000421756 TMEM263Q8WUH6 116 aaKnown RBP9.51□□□□□ -0.89
MCF2L-213ENST00000421756 SPANXA1Q9NS26 97 aa9.51□□□□□ -0.89
MCF2L-213ENST00000421756 DEFB135Q30KP9 77 aa9.5□□□□□ -0.89
MCF2L-213ENST00000421756 IGLV4-60A0A075B6I1 120 aa9.5□□□□□ -0.89
MCF2L-213ENST00000421756 TEX49A0A1B0GTD5 131 aa9.5□□□□□ -0.89
MCF2L-213ENST00000421756 KRTAP1-1Q07627 177 aa9.5□□□□□ -0.89
MCF2L-213ENST00000421756 XCL1P47992 114 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 UBE2D3P61077 147 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 UBE2D2P62837 147 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 MGAM2Q2M2H8 2515 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 TINCRA0A1B0GVN0 87 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 MT-ATP8P03928 68 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms