RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
SSBP3-206ENST00000420121 EIF5A2Q9GZV4 153 aaKnown RBP7.05□□□□□ -1.28
SSBP3-206ENST00000420121 OSTCQ9NRP0 149 aa7.05□□□□□ -1.28
SSBP3-206ENST00000420121 GAGE12HA6NDE8 117 aa7.04□□□□□ -1.28
SSBP3-206ENST00000420121 H7C423 109 aa7.04□□□□□ -1.28
SSBP3-206ENST00000420121 FGF6P10767 208 aa7.04□□□□□ -1.28
SSBP3-206ENST00000420121 ESDP10768 282 aa7.04□□□□□ -1.28
SSBP3-206ENST00000420121 RPS10P46783 165 aaKnown RBP7.04□□□□□ -1.28
SSBP3-206ENST00000420121 SMIM15Q7Z3B0 74 aa7.04□□□□□ -1.28
SSBP3-206ENST00000420121 TMEM191AQ9H0A3 160 aa7.04□□□□□ -1.28
SSBP3-206ENST00000420121 V9GYV3 84 aa7.04□□□□□ -1.28
SSBP3-206ENST00000420121 A0A1B0GUT8 65 aa7.03□□□□□ -1.28
SSBP3-206ENST00000420121 ZNF727A8MUV8 499 aa7.03□□□□□ -1.28
SSBP3-206ENST00000420121 C9JQL5 133 aa7.03□□□□□ -1.28
SSBP3-206ENST00000420121 I3L3M4 83 aa7.03□□□□□ -1.28
SSBP3-206ENST00000420121 TSHBP01222 138 aa7.03□□□□□ -1.28
SSBP3-206ENST00000420121 APCSP02743 223 aa7.03□□□□□ -1.28
SSBP3-206ENST00000420121 RAB4AP20338 218 aa7.03□□□□□ -1.28
SSBP3-206ENST00000420121 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
SSBP3-206ENST00000420121 IGKV3OR2-268A0A0C4DH90 116 aa7.02□□□□□ -1.29
SSBP3-206ENST00000420121 CHTF8P0CG12 524 aa7.02□□□□□ -1.29
SSBP3-206ENST00000420121 RPL37AP61513 92 aaKnown RBP7.02□□□□□ -1.29
SSBP3-206ENST00000420121 AMN1Q8IY45 258 aa7.02□□□□□ -1.29
SSBP3-206ENST00000420121 CHCHD10Q8WYQ3 142 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-206ENST00000420121 ISOC2Q96AB3 205 aa7.02□□□□□ -1.29
SSBP3-206ENST00000420121 IGHV3-64A0A075B6Q5 118 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 TRBV27A0A0K0K1C4 114 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 ZNF25P17030 456 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-206ENST00000420121 PMCHP20382 165 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 RPL23P62829 140 aaKnown RBP7.01□□□□□ -1.29
SSBP3-206ENST00000420121 SRSF3P84103 164 aaKnown RBP7.01□□□□□ -1.29
SSBP3-206ENST00000420121 FOXI1Q12951 378 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 AMMECR1LQ6DCA0 310 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 RNASEKQ6P5S7 137 aaKnown RBP7.01□□□□□ -1.29
SSBP3-206ENST00000420121 NUP35Q8NFH5 326 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 OR5A1Q8NGJ0 315 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 TMEM242Q9NWH2 141 aa7.01□□□□□ -1.29
SSBP3-206ENST00000420121 GVQW2A0A096LPI5 108 aaPredicted RBP7□□□□□ -1.29
SSBP3-206ENST00000420121 SMKR1H3BMG3 65 aa7□□□□□ -1.29
SSBP3-206ENST00000420121 HIGD2BQ4VC39 106 aa7□□□□□ -1.29
SSBP3-206ENST00000420121 MRPL52Q86TS9 123 aaKnown RBP7□□□□□ -1.29
SSBP3-206ENST00000420121 NRACQ8N912 160 aa7□□□□□ -1.29
SSBP3-206ENST00000420121 BORCS7Q96B45 105 aa7□□□□□ -1.29
SSBP3-206ENST00000420121 MRAP2Q96G30 205 aa7□□□□□ -1.29
SSBP3-206ENST00000420121 ST20Q9HBF5 79 aa7□□□□□ -1.29
SSBP3-206ENST00000420121 A0A087WYN8 130 aa6.99□□□□□ -1.29
SSBP3-206ENST00000420121 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.99□□□□□ -1.29
SSBP3-206ENST00000420121 LINC00959A0A1B0GUT2 108 aa6.99□□□□□ -1.29
SSBP3-206ENST00000420121 OXTP01178 125 aa6.99□□□□□ -1.29
SSBP3-206ENST00000420121 TMEM241Q24JQ0 296 aa6.99□□□□□ -1.29
SSBP3-206ENST00000420121 CDC42SE2Q9NRR3 84 aa6.99□□□□□ -1.29
SSBP3-206ENST00000420121 COX6A2Q02221 97 aa6.98□□□□□ -1.29
SSBP3-206ENST00000420121 FAM74A3Q4VXF1 159 aa6.98□□□□□ -1.29
SSBP3-206ENST00000420121 PRSS3P2Q8NHM4 247 aa6.98□□□□□ -1.29
SSBP3-206ENST00000420121 PLAC8Q9NZF1 115 aa6.98□□□□□ -1.29
SSBP3-206ENST00000420121 SMIM27A0A1W2PRY6 76 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 C7orf77A4D0Y5 90 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 F8W036 122 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 CCL25O15444 150 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 XCL1P47992 114 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 RIGQ13278 110 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 MRPL51Q4U2R6 128 aaKnown RBP6.97□□□□□ -1.29
SSBP3-206ENST00000420121 NAT8Q9UHE5 227 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
SSBP3-206ENST00000420121 SUMO2P61956 95 aaKnown RBP6.96□□□□□ -1.3
SSBP3-206ENST00000420121 ADIRFQ15847 76 aa6.96□□□□□ -1.3
SSBP3-206ENST00000420121 FAM104BQ5XKR9 115 aa6.96□□□□□ -1.3
SSBP3-206ENST00000420121 ZNF664Q8N3J9 261 aa6.96□□□□□ -1.3
SSBP3-206ENST00000420121 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
SSBP3-206ENST00000420121 TMEM101Q96IK0 257 aa6.96□□□□□ -1.3
SSBP3-206ENST00000420121 BTF3L4Q96K17 158 aa6.96□□□□□ -1.3
SSBP3-206ENST00000420121 A0A096LNI7 61 aa6.95□□□□□ -1.3
SSBP3-206ENST00000420121 VCYO14598 125 aa6.95□□□□□ -1.3
SSBP3-206ENST00000420121 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
SSBP3-206ENST00000420121 IFITM2Q01629 132 aa6.95□□□□□ -1.3
SSBP3-206ENST00000420121 UBE2D4Q9Y2X8 147 aa6.95□□□□□ -1.3
SSBP3-206ENST00000420121 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
SSBP3-206ENST00000420121 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
SSBP3-206ENST00000420121 CD164L2Q6UWJ8 174 aa6.94□□□□□ -1.3
SSBP3-206ENST00000420121 FAM104AQ969W3 186 aa6.94□□□□□ -1.3
SSBP3-206ENST00000420121 CSDC2Q9Y534 153 aaKnown RBP6.94□□□□□ -1.3
SSBP3-206ENST00000420121 TNXBP22105 4242 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 TRBV24-1A0A075B6N3 115 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 IGKV2-24A0A0C4DH68 120 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 A0A1B0GXF2 115 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 LINC00587B1AMM8 73 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 PHOX2AO14813 284 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 PPP1R17O96001 155 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 CAMPP49913 170 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 RPL32P62910 135 aaKnown RBP6.93□□□□□ -1.3
SSBP3-206ENST00000420121 PEA15Q15121 130 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 SS18Q15532 418 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 RNASE13Q5GAN3 156 aaKnown RBP6.93□□□□□ -1.3
SSBP3-206ENST00000420121 SMDT1Q9H4I9 107 aa6.93□□□□□ -1.3
SSBP3-206ENST00000420121 LINC00862A6NCI5 91 aa6.92□□□□□ -1.3
SSBP3-206ENST00000420121 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
SSBP3-206ENST00000420121 FCER1GP30273 86 aa6.92□□□□□ -1.3
SSBP3-206ENST00000420121 Q6ZRU5 148 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms