RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 H3BTX0 84 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 PEX7O00628 323 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 IGKV2-30P06310 120 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 ZNF823P16415 610 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 ERCC8Q13216 396 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 RIGQ13278 110 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 FXYD3Q14802 87 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 ZC2HC1BQ5TFG8 222 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 ZNF497Q6ZNH5 498 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 ZNF818PQ6ZRF7 136 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 ZNF329Q86UD4 541 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 BORCS8Q96FH0 119 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 DSCR8Q96T75 97 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 PAXXQ9BUH6 204 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 Q9H8V8 135 aa3.98□□□□□ -1.77
ECHDC1-206ENST00000417628 DNAH2Q9P225 4427 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 IGKV2D-26A0A0A0MRZ7 120 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 LOC107984156A0A0G2JMH3 177 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 IGHV3-64DA0A0J9YX35 117 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 TRBV30A0A0K0K1B3 111 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 PLAC8L1A1L4L8 177 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 KNCNA6PVL3 124 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 M0R1W7 72 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 MRPS12O15235 138 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 IGKV1-5P01602 117 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 IAPPP10997 89 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 HCP5Q6MZN7 132 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 FOXL2NBQ6ZUU3 175 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 MRPL55Q7Z7F7 128 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 LINC00596Q86U02 117 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 ARL17AQ8IVW1 177 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 OR8A1Q8NGG7 326 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 VSIG2Q96IQ7 327 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 PLEKHA3Q9HB20 300 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 MUC2Q02817 5179 aa3.97□□□□□ -1.77
ECHDC1-206ENST00000417628 PKD1P98161 4303 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 DNAH6Q9C0G6 4158 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 VPS13DQ5THJ4 4388 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 IGKV1-9A0A0C4DH69 117 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 A0A0J9YWU9 116 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 PRSS46E5RG02 174 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 NDUFC1O43677 76 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 SPINK4O60575 86 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 IGKV1-39P01597 117 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 IGKV1D-39P04432 117 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 NANOS2P60321 138 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 ZNF56Q15929 161 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 ZFP2Q6ZN57 461 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 RNF182Q8N6D2 247 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 DAZ1Q9NQZ3 744 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 ZNF355PQ9NSJ1 428 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 PRO1854Q9UHT4 67 aa3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 FLG2Q5D862 2391 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-206ENST00000417628 A0A1B0GUT8 65 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 PRAC2D3DTV9 90 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 M0R2N4 97 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 FCER1GP30273 86 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 IFI27P40305 119 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 SYNJ2BPP57105 145 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 FAM222AQ5U5X8 452 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 ATP5EP2Q5VTU8 51 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 Q6JHZ5 121 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 ORMDL3Q8N138 153 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 DYNAPQ8N1N2 210 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 LINC01561Q8N1V8 128 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 Q8N8P6 123 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 FMC1Q96HJ9 113 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 EMC6Q9BV81 110 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 OTORQ9NRC9 128 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 KAAG1Q9UBP8 84 aa3.95□□□□□ -1.78
ECHDC1-206ENST00000417628 APOBP04114 4563 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 INS-IGF2F8WCM5 200 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 K7EMI3 77 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 P01737 135 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 RPS27P42677 84 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 PCBD1P61457 104 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 HERVK_113P61574 105 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 LINC00322Q6ZN03 302 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 VKORC1L1Q8N0U8 176 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 C4orf3Q8WVX3 66 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 S1PR3Q99500 378 aa3.94□□□□□ -1.78
ECHDC1-206ENST00000417628 IGLV5-45A0A087WSX0 123 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 IGKV1D-13A0A0B4J2D9 117 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 IGHV1-58A0A0C4DH39 117 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 F8VRH5 84 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 H3BVH4 76 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 M0R135 149 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 IGHV3-33P01772 117 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 IGKV1-13P0DP09 117 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 EDDM3BP56851 147 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 ERVK-16P61578 105 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 KLKP1Q107X0 134 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 EIF4EBP1Q13541 118 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 FP248Q71RG6 208 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 LYPD1Q8N2G4 141 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 CCL28Q9NRJ3 127 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 Q9UF83 564 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 244 ms