RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 NTN5Q8WTR8 489 aaPredicted RBP6.91□□□□□ -1.3
SNHG3-201ENST00000413987 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 LINC00527Q9UJ94 153 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 IGHV4-59P01825 116 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 HERVK_113P61574 105 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 Q8N6K4 173 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 MAST4O15021 2626 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 RBAKDNA6NC62 111 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 KLLNB2CW77 178 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 HLA-DMBP28068 263 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 HERVK_113P63121 156 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 SLC50A1Q9BRV3 221 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.3
SNHG3-201ENST00000413987 C11orf68Q9H3H3 251 aaKnown RBP6.9□□□□□ -1.3
SNHG3-201ENST00000413987 HIVEP2P31629 2446 aa6.9□□□□□ -1.31
SNHG3-201ENST00000413987 SLC25A20O43772 301 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 Q8N9W7 124 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 Q8TAT8 98 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 OOSP1A8MZH6 123 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 PSPHP1O15172 72 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 NPBQ8NG41 125 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 LINC01600Q96MT4 127 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 IMUPQ9GZP8 106 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 PRO1854Q9UHT4 67 aa6.89□□□□□ -1.31
SNHG3-201ENST00000413987 PRB4P10163 310 aaPredicted RBP6.88□□□□□ -1.31
SNHG3-201ENST00000413987 EBI3Q14213 229 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 TM2D3Q9BRN9 247 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 S4R3C0 116 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 F8P00451 2351 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 IGHV7-81A0A0B4J1V7 117 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 FSHBP01225 129 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 MP68P56378 58 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 BLCAPP62952 87 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 SPANXDQ9BXN6 97 aa6.88□□□□□ -1.31
SNHG3-201ENST00000413987 A0A0J9YY99 117 aa6.87□□□□□ -1.31
SNHG3-201ENST00000413987 TRGV3P03979 118 aa6.87□□□□□ -1.31
SNHG3-201ENST00000413987 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
SNHG3-201ENST00000413987 CFC1P0CG37 223 aa6.87□□□□□ -1.31
SNHG3-201ENST00000413987 PSMB8P28062 276 aa6.87□□□□□ -1.31
SNHG3-201ENST00000413987 SPANXN1Q5VSR9 72 aa6.87□□□□□ -1.31
SNHG3-201ENST00000413987 C5orf56Q8N8D9 126 aa6.87□□□□□ -1.31
SNHG3-201ENST00000413987 IGHV3OR16-13A0A075B7E8 117 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 G3V318 75 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 PPP1R17O96001 155 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 FN1P02751 2386 aaKnown RBP6.86□□□□□ -1.31
SNHG3-201ENST00000413987 IGKV3D-20A0A0C4DH25 116 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 IGHV3-30P01768 117 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 IGHV3-30-5P0DP03 117 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 KTN1-AS1Q86SY8 53 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 SLC25A29Q8N8R3 303 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 BRK1Q8WUW1 75 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 AGRNO00468 2067 aa6.86□□□□□ -1.31
SNHG3-201ENST00000413987 LY6G6DO95868 133 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 C2orf66Q6UXQ4 117 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 JMJD1CQ15652 2540 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 IGHV7-4-1A0A0J9YVY3 117 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 A6NDX4 124 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 M0R381 172 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 KLK15Q9H2R5 256 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 C21orf62Q9NYP8 219 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 MOB4Q9Y3A3 225 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 SMAD5-AS1Q9Y6J3 95 aa6.85□□□□□ -1.31
SNHG3-201ENST00000413987 IGLV11-55A0A075B6I3 123 aa6.84□□□□□ -1.31
SNHG3-201ENST00000413987 IGLV1-40P01703 118 aa6.84□□□□□ -1.31
SNHG3-201ENST00000413987 IGHV3-23P01764 117 aa6.84□□□□□ -1.31
SNHG3-201ENST00000413987 IGHV3OR16-12A0A075B7B8 117 aa6.84□□□□□ -1.32
SNHG3-201ENST00000413987 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.32
SNHG3-201ENST00000413987 A0A0B4J2C4 111 aa6.84□□□□□ -1.32
SNHG3-201ENST00000413987 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.32
SNHG3-201ENST00000413987 DPH3Q96FX2 82 aa6.84□□□□□ -1.32
SNHG3-201ENST00000413987 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
SNHG3-201ENST00000413987 TMEM258P61165 79 aa6.83□□□□□ -1.32
SNHG3-201ENST00000413987 C10orf99Q6UWK7 81 aa6.83□□□□□ -1.32
SNHG3-201ENST00000413987 Q6YL49 198 aa6.83□□□□□ -1.32
SNHG3-201ENST00000413987 KLHL30-AS1Q8NEE0 82 aa6.83□□□□□ -1.32
SNHG3-201ENST00000413987 TENM1Q9UKZ4 2725 aa6.83□□□□□ -1.32
SNHG3-201ENST00000413987 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 IGHV6-1A0A0B4J1U7 121 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 TRBV10-2A0A0K0K1G8 114 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 INAFM1C9JVW0 142 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 IGHV3-33P01772 117 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 ODF3Q96PU9 254 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 DPH3P1Q9H4G8 78 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 TRAV2A0A0B4J234 112 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 H3BMM0 161 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 IGFL4Q6B9Z1 124 aa6.82□□□□□ -1.32
SNHG3-201ENST00000413987 UBE2WQ96B02 151 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms