RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 HIGD1CA8MV81 97 aa10.27□□□□□ -0.77
SCAMP4-203ENST00000411971 ZNF25P17030 456 aaPredicted RBP10.27□□□□□ -0.77
SCAMP4-203ENST00000411971 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
SCAMP4-203ENST00000411971 hCG_2014768A0A024R1R8 64 aa10.26□□□□□ -0.77
SCAMP4-203ENST00000411971 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
SCAMP4-203ENST00000411971 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
SCAMP4-203ENST00000411971 ST20Q9HBF5 79 aa10.26□□□□□ -0.77
SCAMP4-203ENST00000411971 TRBV27A0A0K0K1C4 114 aa10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 BLOC1S1P78537 153 aa10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 MRPL52Q86TS9 123 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 SMIM7Q9BQ49 75 aa10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 V9GYV3 84 aa10.25□□□□□ -0.77
SCAMP4-203ENST00000411971 IGHV1-58A0A0C4DH39 117 aa10.24□□□□□ -0.77
SCAMP4-203ENST00000411971 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-203ENST00000411971 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
SCAMP4-203ENST00000411971 NRACQ8N912 160 aa10.24□□□□□ -0.77
SCAMP4-203ENST00000411971 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
SCAMP4-203ENST00000411971 CARD19Q96LW7 228 aa10.24□□□□□ -0.77
SCAMP4-203ENST00000411971 RNF213Q63HN8 5207 aa10.24□□□□□ -0.77
SCAMP4-203ENST00000411971 AKAP14Q86UN6 197 aa10.23□□□□□ -0.77
SCAMP4-203ENST00000411971 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
SCAMP4-203ENST00000411971 BTF3L4Q96K17 158 aa10.23□□□□□ -0.77
SCAMP4-203ENST00000411971 OSTCQ9NRP0 149 aa10.23□□□□□ -0.77
SCAMP4-203ENST00000411971 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
SCAMP4-203ENST00000411971 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
SCAMP4-203ENST00000411971 FAM104AQ969W3 186 aa10.22□□□□□ -0.77
SCAMP4-203ENST00000411971 FAM210AQ96ND0 272 aa10.22□□□□□ -0.77
SCAMP4-203ENST00000411971 IGLV4-69A0A075B6H9 119 aa10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 A0A1W2PNN7 141 aa10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 C7orf77A4D0Y5 90 aa10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 KRTAP10-8P60410 259 aa10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 SYCNQ0VAF6 134 aa10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 EIF5A2Q9GZV4 153 aaKnown RBP10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 UBE2D4Q9Y2X8 147 aa10.21□□□□□ -0.77
SCAMP4-203ENST00000411971 ZNF727A8MUV8 499 aa10.2□□□□□ -0.78
SCAMP4-203ENST00000411971 C9JQL5 133 aa10.2□□□□□ -0.78
SCAMP4-203ENST00000411971 SS18Q15532 418 aa10.2□□□□□ -0.78
SCAMP4-203ENST00000411971 CAMPP49913 170 aa10.19□□□□□ -0.78
SCAMP4-203ENST00000411971 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
SCAMP4-203ENST00000411971 Q6ZUT4 128 aa10.19□□□□□ -0.78
SCAMP4-203ENST00000411971 ISOC2Q96AB3 205 aa10.19□□□□□ -0.78
SCAMP4-203ENST00000411971 BORCS7Q96B45 105 aa10.19□□□□□ -0.78
SCAMP4-203ENST00000411971 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
SCAMP4-203ENST00000411971 MRPL51Q4U2R6 128 aaKnown RBP10.18□□□□□ -0.78
SCAMP4-203ENST00000411971 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
SCAMP4-203ENST00000411971 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
SCAMP4-203ENST00000411971 RPL23P62829 140 aaKnown RBP10.17□□□□□ -0.78
SCAMP4-203ENST00000411971 SRSF3P84103 164 aaKnown RBP10.17□□□□□ -0.78
SCAMP4-203ENST00000411971 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
SCAMP4-203ENST00000411971 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
SCAMP4-203ENST00000411971 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
SCAMP4-203ENST00000411971 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.16□□□□□ -0.78
SCAMP4-203ENST00000411971 VCYO14598 125 aa10.16□□□□□ -0.78
SCAMP4-203ENST00000411971 SPINK6Q6UWN8 80 aa10.16□□□□□ -0.78
SCAMP4-203ENST00000411971 FCER1GP30273 86 aa10.15□□□□□ -0.78
SCAMP4-203ENST00000411971 RPL39P62891 51 aaKnown RBP10.15□□□□□ -0.78
SCAMP4-203ENST00000411971 RIGQ13278 110 aa10.15□□□□□ -0.78
SCAMP4-203ENST00000411971 FAM104BQ5XKR9 115 aa10.15□□□□□ -0.78
SCAMP4-203ENST00000411971 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.78
SCAMP4-203ENST00000411971 LINC00474Q9P2X8 69 aa10.15□□□□□ -0.78
SCAMP4-203ENST00000411971 CSDC2Q9Y534 153 aaKnown RBP10.15□□□□□ -0.78
SCAMP4-203ENST00000411971 LOC107984640A0A0U1RRK4 108 aa10.14□□□□□ -0.79
SCAMP4-203ENST00000411971 A0A1B0GVG6 124 aa10.14□□□□□ -0.79
SCAMP4-203ENST00000411971 C1orf196B1AJZ1 125 aa10.14□□□□□ -0.79
SCAMP4-203ENST00000411971 COX7A2LO14548 114 aa10.14□□□□□ -0.79
SCAMP4-203ENST00000411971 SMIM27A0A1W2PRY6 76 aa10.13□□□□□ -0.79
SCAMP4-203ENST00000411971 Q6ZRP5 223 aa10.13□□□□□ -0.79
SCAMP4-203ENST00000411971 KRTAP11-1Q8IUC1 163 aa10.13□□□□□ -0.79
SCAMP4-203ENST00000411971 LPAP08519 4548 aa10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 MALP21145 153 aa10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 TMEM241Q24JQ0 296 aa10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 FAM74A3Q4VXF1 159 aa10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 C9orf116Q5BN46 136 aaPredicted RBP10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 PHF5AQ7RTV0 110 aaKnown RBP10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 NAT8BQ9UHF3 227 aa10.12□□□□□ -0.79
SCAMP4-203ENST00000411971 APOMO95445 188 aa10.11□□□□□ -0.79
SCAMP4-203ENST00000411971 ADIRFQ15847 76 aa10.11□□□□□ -0.79
SCAMP4-203ENST00000411971 C10orf25Q5T742 122 aa10.11□□□□□ -0.79
SCAMP4-203ENST00000411971 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
SCAMP4-203ENST00000411971 PSORS1C2Q9UIG4 136 aa10.11□□□□□ -0.79
SCAMP4-203ENST00000411971 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
SCAMP4-203ENST00000411971 C2orf48Q96LS8 159 aa10.1□□□□□ -0.79
SCAMP4-203ENST00000411971 KIR2DL4Q99706 377 aa10.1□□□□□ -0.79
SCAMP4-203ENST00000411971 TNFRSF6BO95407 300 aa10.09□□□□□ -0.79
SCAMP4-203ENST00000411971 NPYP01303 97 aa10.09□□□□□ -0.79
SCAMP4-203ENST00000411971 RPL18AQ02543 176 aaKnown RBP10.09□□□□□ -0.79
SCAMP4-203ENST00000411971 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
SCAMP4-203ENST00000411971 REG3GQ6UW15 175 aa10.09□□□□□ -0.79
SCAMP4-203ENST00000411971 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
SCAMP4-203ENST00000411971 FAM168BA1KXE4 195 aa10.08□□□□□ -0.8
SCAMP4-203ENST00000411971 MRPL54Q6P161 138 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-203ENST00000411971 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
SCAMP4-203ENST00000411971 C20orf78Q9BR46 151 aa10.08□□□□□ -0.8
SCAMP4-203ENST00000411971 SMIM2Q9BVW6 85 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms