RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 APELAP0DMC3 54 aa3.78□□□□□ -1.8
R3HDM1-204ENST00000410054 PAPPA2Q9BXP8 1791 aa3.78□□□□□ -1.8
R3HDM1-204ENST00000410054 KIAA1549Q9HCM3 1950 aa3.78□□□□□ -1.8
R3HDM1-204ENST00000410054 TET1Q8NFU7 2136 aa3.78□□□□□ -1.81
R3HDM1-204ENST00000410054 IGHV3-35A0A0C4DH35 117 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 ZNF503-AS2A6NEH8 195 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 NTM-AS1Q6ZSK4 140 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 C5orf56Q8N8D9 126 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 BRCA1P38398 1863 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 TRGV2A0A075B6R0 118 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 IGHV3-66A0A0C4DH42 116 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 MED14OSP0DP75 135 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 PRCDQ00LT1 54 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 THADAQ6YHU6 1953 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 VPS13AQ96RL7 3174 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 MINOS1Q5TGZ0 78 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 LINC00476Q8WZB0 136 aa3.77□□□□□ -1.81
R3HDM1-204ENST00000410054 LINC00308Q8TCZ7 52 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 SMAD5-AS1Q9Y6J3 95 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 PKDREJQ9NTG1 2253 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 OTOGLQ3ZCN5 2332 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 KLF14Q8TD94 323 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 IBA57-AS1B1ANH7 110 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 DEFB105AQ8NG35 78 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 Q8TAT8 98 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 CFAP47Q6ZTR5 3102 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 AKAP6Q13023 2319 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 CACNA1EQ15878 2313 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 BPTFQ12830 3046 aa3.76□□□□□ -1.81
R3HDM1-204ENST00000410054 A0A087WYN8 130 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 C16orf90A8MZG2 172 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 E7EUB6 86 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 PSCAO43653 123 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 ADAMTSL4-AS1Q5T5F5 129 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 TPRP12270 2363 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 ASB16-AS1Q495Z4 193 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 C8orf17Q9NRJ1 99 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 ARFGEF3Q5TH69 2177 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 PLXNA1Q9UIW2 1896 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
R3HDM1-204ENST00000410054 VPS13CQ709C8 3753 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 CACNA1GO43497 2377 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 PIP4P2Q8N4L2 257 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 IL9P15248 144 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 Q6ZS46 218 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 LINC00337Q8N6G1 96 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 ZFAND2AQ8N6M9 145 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 CSNK1G2-AS1Q8NCQ2 148 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 COL4A4P53420 1690 aaPredicted RBP3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 DENND4CQ5VZ89 1909 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 A8MWP4 228 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 H0YGG7 62 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 MED13LQ71F56 2210 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 FNDC1Q4ZHG4 1894 aaPredicted RBP3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 EML6Q6ZMW3 1958 aa3.74□□□□□ -1.81
R3HDM1-204ENST00000410054 CSMD1Q96PZ7 3565 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 LINC01548A6NM66 108 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 CXCL17Q6UXB2 119 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 TSC2P49815 1807 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 RALGAPA2Q2PPJ7 1873 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 SMG1Q96Q15 3661 aaKnown RBP3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 NUPR2A6NF83 97 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 CCL3P10147 92 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 CSRP3P50461 194 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 IGFL3Q6UXB1 125 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 SMCR5Q8TEV8 140 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 FANCMQ8IYD8 2048 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 MUC4Q99102 2169 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 DSCR9P59020 149 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 PATE1Q8WXA2 126 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 ALPK3Q96L96 1907 aa3.73□□□□□ -1.81
R3HDM1-204ENST00000410054 LOC400499M0QZD8 3231 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 IGHV3-53P01767 116 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 GBF1Q92538 1859 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 FGF22Q9HCT0 170 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 PDCD11Q14690 1871 aaKnown RBP3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 SHROOM3Q8TF72 1996 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 CCL4P13236 92 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 PCOTHQ58A44 107 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 ZNF236Q9UL36 1845 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 NAV3Q8IVL0 2385 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 DEFB110Q30KQ9 67 aa3.72□□□□□ -1.81
R3HDM1-204ENST00000410054 CSMD2Q7Z408 3487 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 COX7BP24311 80 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 DEFB113Q30KQ7 82 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 RPL39P5Q59GN2 51 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 TMEM105Q8N8V8 129 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 Q8NBF4 154 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 CCL4L1Q8NHW4 92 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 KIF25-AS1Q9Y6Z4 181 aa3.71□□□□□ -1.81
R3HDM1-204ENST00000410054 IGLV2-8P01709 118 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 PRAC2D3DTV9 90 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 FAM229BQ4G0N7 80 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 PATE2Q6UY27 113 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 COA5Q86WW8 74 aa3.71□□□□□ -1.82
R3HDM1-204ENST00000410054 Q8N2B8 174 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms