RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ZNF664Q8N3J9 261 aa13.86□□□□□ -0.19
C4orf48-202ENST00000409860 TOMM6Q96B49 74 aa13.86□□□□□ -0.19
C4orf48-202ENST00000409860 RMI2Q96E14 147 aa13.86□□□□□ -0.19
C4orf48-202ENST00000409860 CDC42SE2Q9NRR3 84 aa13.86□□□□□ -0.19
C4orf48-202ENST00000409860 PYGO1Q9Y3Y4 419 aa13.86□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BKO60814 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BJP06899 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BOP23527 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BBP33778 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BDP58876 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BCP62807 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 MIAQ16674 131 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST2H2BEQ16778 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.85□□□□□ -0.19
C4orf48-202ENST00000409860 ENHOQ6UWT2 76 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BHQ93079 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BNQ99877 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 HIST1H2BMQ99879 126 aa13.85□□□□□ -0.19
C4orf48-202ENST00000409860 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
C4orf48-202ENST00000409860 Q6ZUT4 128 aa13.84□□□□□ -0.19
C4orf48-202ENST00000409860 IGKV3OR2-268A0A0C4DH90 116 aa13.83□□□□□ -0.2
C4orf48-202ENST00000409860 HSBP1O75506 76 aa13.83□□□□□ -0.2
C4orf48-202ENST00000409860 HBDP02042 147 aa13.83□□□□□ -0.2
C4orf48-202ENST00000409860 TM2D2Q9BX73 214 aa13.83□□□□□ -0.2
C4orf48-202ENST00000409860 SERF1AO75920 110 aa13.82□□□□□ -0.2
C4orf48-202ENST00000409860 NPSP0C0P6 89 aa13.82□□□□□ -0.2
C4orf48-202ENST00000409860 SCGB3A1Q96QR1 104 aa13.82□□□□□ -0.2
C4orf48-202ENST00000409860 TIMM17AQ99595 171 aa13.82□□□□□ -0.2
C4orf48-202ENST00000409860 C1orf43Q9BWL3 253 aa13.82□□□□□ -0.2
C4orf48-202ENST00000409860 COX11Q9Y6N1 276 aa13.82□□□□□ -0.2
C4orf48-202ENST00000409860 IGLV4-3A0A075B6K6 122 aa13.81□□□□□ -0.2
C4orf48-202ENST00000409860 IGKV2D-24A0A075B6R9 120 aa13.81□□□□□ -0.2
C4orf48-202ENST00000409860 TRAV8-4A0A0B4J246 113 aa13.81□□□□□ -0.2
C4orf48-202ENST00000409860 IGIPA6NJ69 53 aa13.81□□□□□ -0.2
C4orf48-202ENST00000409860 PMCHL1Q16048 86 aa13.81□□□□□ -0.2
C4orf48-202ENST00000409860 RNASE13Q5GAN3 156 aaKnown RBP13.81□□□□□ -0.2
C4orf48-202ENST00000409860 Q6ZN92 141 aa13.81□□□□□ -0.2
C4orf48-202ENST00000409860 TMEM141Q96I45 108 aa13.81□□□□□ -0.2
C4orf48-202ENST00000409860 OPRPNQ99935 248 aaPredicted RBP13.81□□□□□ -0.2
C4orf48-202ENST00000409860 PAPPA-AS1Q5QFB9 102 aa13.8□□□□□ -0.2
C4orf48-202ENST00000409860 ERASQ7Z444 233 aa13.8□□□□□ -0.2
C4orf48-202ENST00000409860 A0A096LNJ9 63 aa13.79□□□□□ -0.2
C4orf48-202ENST00000409860 PSCAO43653 123 aa13.79□□□□□ -0.2
C4orf48-202ENST00000409860 Q6ZRN7 208 aaPredicted RBP13.79□□□□□ -0.2
C4orf48-202ENST00000409860 RTL8CO15255 209 aa13.78□□□□□ -0.2
C4orf48-202ENST00000409860 LINC00310P59036 64 aa13.78□□□□□ -0.2
C4orf48-202ENST00000409860 TEX43Q6ZNM6 134 aa13.78□□□□□ -0.2
C4orf48-202ENST00000409860 FAM104AQ969W3 186 aa13.78□□□□□ -0.2
C4orf48-202ENST00000409860 IGLV10-54A0A075B6I4 117 aa13.77□□□□□ -0.21
C4orf48-202ENST00000409860 LINC00959A0A1B0GUT2 108 aa13.77□□□□□ -0.21
C4orf48-202ENST00000409860 IFITM10A6NMD0 228 aa13.77□□□□□ -0.21
C4orf48-202ENST00000409860 SS18Q15532 418 aa13.77□□□□□ -0.21
C4orf48-202ENST00000409860 C2orf88Q9BSF0 95 aa13.77□□□□□ -0.21
C4orf48-202ENST00000409860 VCX2Q9H322 139 aa13.77□□□□□ -0.21
C4orf48-202ENST00000409860 RYR3Q15413 4870 aa13.76□□□□□ -0.21
C4orf48-202ENST00000409860 TRAV13-1A0A0B4J241 112 aa13.76□□□□□ -0.21
C4orf48-202ENST00000409860 PDZD11Q5EBL8 140 aa13.76□□□□□ -0.21
C4orf48-202ENST00000409860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.75□□□□□ -0.21
C4orf48-202ENST00000409860 CCL25O15444 150 aa13.75□□□□□ -0.21
C4orf48-202ENST00000409860 ATP5LO75964 103 aa13.75□□□□□ -0.21
C4orf48-202ENST00000409860 LINC00336Q6ZUF6 198 aa13.75□□□□□ -0.21
C4orf48-202ENST00000409860 FAM19A2Q8N3H0 131 aa13.75□□□□□ -0.21
C4orf48-202ENST00000409860 CHCHD10Q8WYQ3 142 aaPredicted RBP13.75□□□□□ -0.21
C4orf48-202ENST00000409860 AMELXQ99217 191 aa13.74□□□□□ -0.21
C4orf48-202ENST00000409860 NUPR1O60356 82 aa13.73□□□□□ -0.21
C4orf48-202ENST00000409860 NDUFA6P56556 154 aa13.73□□□□□ -0.21
C4orf48-202ENST00000409860 DNAH2Q9P225 4427 aa13.72□□□□□ -0.21
C4orf48-202ENST00000409860 COA6Q5JTJ3 125 aaKnown RBP13.72□□□□□ -0.21
C4orf48-202ENST00000409860 GAGE12HA6NDE8 117 aa13.71□□□□□ -0.21
C4orf48-202ENST00000409860 XCL1P47992 114 aa13.71□□□□□ -0.21
C4orf48-202ENST00000409860 ZC2HC1BQ5TFG8 222 aa13.71□□□□□ -0.21
C4orf48-202ENST00000409860 LINC00173Q6ZV60 143 aa13.71□□□□□ -0.21
C4orf48-202ENST00000409860 BAALCQ8WXS3 180 aa13.71□□□□□ -0.21
C4orf48-202ENST00000409860 PRSS29PA6NIE9 313 aa13.7□□□□□ -0.22
C4orf48-202ENST00000409860 KRTAP26-1Q6PEX3 210 aa13.7□□□□□ -0.22
C4orf48-202ENST00000409860 LEPROTL1O95214 131 aa13.69□□□□□ -0.22
C4orf48-202ENST00000409860 TNP2Q05952 138 aa13.69□□□□□ -0.22
C4orf48-202ENST00000409860 PMVKQ15126 192 aa13.69□□□□□ -0.22
C4orf48-202ENST00000409860 CD164L2Q6UWJ8 174 aa13.69□□□□□ -0.22
C4orf48-202ENST00000409860 DNAH10Q8IVF4 4471 aa13.68□□□□□ -0.22
C4orf48-202ENST00000409860 UBE2D1P51668 147 aa13.68□□□□□ -0.22
C4orf48-202ENST00000409860 MAPKAPK5-AS1Q8N8E1 139 aa13.68□□□□□ -0.22
C4orf48-202ENST00000409860 IFI27L1Q96BM0 104 aa13.68□□□□□ -0.22
C4orf48-202ENST00000409860 HSPB8Q9UJY1 196 aa13.68□□□□□ -0.22
C4orf48-202ENST00000409860 FOXI1Q12951 378 aa13.67□□□□□ -0.22
C4orf48-202ENST00000409860 CST9LQ9H4G1 147 aa13.67□□□□□ -0.22
C4orf48-202ENST00000409860 EREGO14944 169 aa13.66□□□□□ -0.22
C4orf48-202ENST00000409860 DNAH17Q9UFH2 4485 aa13.65□□□□□ -0.22
C4orf48-202ENST00000409860 A0A087WTM6 91 aa13.65□□□□□ -0.22
C4orf48-202ENST00000409860 S100A6P06703 90 aa13.65□□□□□ -0.22
C4orf48-202ENST00000409860 PRSS1P07477 247 aa13.65□□□□□ -0.22
C4orf48-202ENST00000409860 FABP4P15090 132 aa13.65□□□□□ -0.22
C4orf48-202ENST00000409860 SEC11AP67812 179 aa13.65□□□□□ -0.22
C4orf48-202ENST00000409860 LINC00242Q5T6M2 205 aa13.65□□□□□ -0.22
C4orf48-202ENST00000409860 LRCOL1A6NCL2 159 aa13.64□□□□□ -0.23
C4orf48-202ENST00000409860 PACRGQ96M98 296 aaPredicted RBP13.64□□□□□ -0.23
C4orf48-202ENST00000409860 COX7A2LO14548 114 aa13.63□□□□□ -0.23
C4orf48-202ENST00000409860 LECT2O14960 151 aa13.63□□□□□ -0.23
C4orf48-202ENST00000409860 FAM19A3Q7Z5A8 133 aa13.63□□□□□ -0.23
C4orf48-202ENST00000409860 FRAS1Q86XX4 4008 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms