RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
PPP4R1-203ENST00000400556 ATXN8Q156A1 80 aa7.66□□□□□ -1.18
PPP4R1-203ENST00000400556 ICOSQ9Y6W8 199 aa7.66□□□□□ -1.18
PPP4R1-203ENST00000400556 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
PPP4R1-203ENST00000400556 C2orf82Q6UX34 121 aa7.65□□□□□ -1.18
PPP4R1-203ENST00000400556 RPL13AP40429 203 aaKnown RBP7.65□□□□□ -1.18
PPP4R1-203ENST00000400556 TRGV1A0A0A0MS02 117 aa7.65□□□□□ -1.19
PPP4R1-203ENST00000400556 MAP6D1Q9H9H5 199 aa7.65□□□□□ -1.19
PPP4R1-203ENST00000400556 ANAPC13Q9BS18 74 aa7.64□□□□□ -1.19
PPP4R1-203ENST00000400556 ZNF415Q09FC8 603 aa7.64□□□□□ -1.19
PPP4R1-203ENST00000400556 TTC32Q5I0X7 151 aa7.64□□□□□ -1.19
PPP4R1-203ENST00000400556 HIVEP2P31629 2446 aa7.64□□□□□ -1.19
PPP4R1-203ENST00000400556 TEX29Q8N6K0 151 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 Q9H8V8 135 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 NOTCH2Q04721 2471 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 TMEM89A2RUT3 159 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 H7C423 109 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 MIAQ16674 131 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 ZFAND6Q6FIF0 208 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 TMEM101Q96IK0 257 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 PYGO1Q9Y3Y4 419 aa7.63□□□□□ -1.19
PPP4R1-203ENST00000400556 PLA2G2AP14555 144 aa7.62□□□□□ -1.19
PPP4R1-203ENST00000400556 SNCGO76070 127 aa7.62□□□□□ -1.19
PPP4R1-203ENST00000400556 C11orf72Q8NBR9 251 aa7.62□□□□□ -1.19
PPP4R1-203ENST00000400556 UBE2WQ96B02 151 aa7.62□□□□□ -1.19
PPP4R1-203ENST00000400556 TRAV8-4A0A0B4J246 113 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 TINCRA0A1B0GVN0 87 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 GAGE12JA6NER3 117 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 GAGE4Q13068 117 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 GAGE5Q13069 117 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 Q6YL49 198 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 Q6ZTI0 123 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 WFDC10AQ9H1F0 79 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 CR1P17927 2039 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 C15orf53Q8NAA6 179 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 SS18L2Q9UHA2 77 aa7.61□□□□□ -1.19
PPP4R1-203ENST00000400556 A0A096LNT2 108 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 MEIG1Q5JSS6 88 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 Q8N2B8 174 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 B5MCH6 92 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 GAGE2BQ13066 116 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 GAGE2EQ4V326 116 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 GAGE2DQ9UEU5 116 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 COX6CP09669 75 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 IGHV4-31P0DP07 118 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 SPANXA1Q9NS26 97 aa7.6□□□□□ -1.19
PPP4R1-203ENST00000400556 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 INSP01308 110 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 PIK3CD-AS1Q5SR53 167 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 LOC100131303A0A0U1RQF7 123 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 LINC00242Q5T6M2 205 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 DEFB114Q30KQ6 69 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 CITED2Q99967 270 aaPredicted RBP7.59□□□□□ -1.19
PPP4R1-203ENST00000400556 PRIMA1Q86XR5 153 aa7.59□□□□□ -1.2
PPP4R1-203ENST00000400556 STHQ8IWL8 128 aa7.59□□□□□ -1.2
PPP4R1-203ENST00000400556 C3orf56Q8N813 242 aa7.59□□□□□ -1.2
PPP4R1-203ENST00000400556 TOMM7Q9P0U1 55 aa7.59□□□□□ -1.2
PPP4R1-203ENST00000400556 ITPR2Q14571 2701 aa7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 CITED1Q99966 193 aa7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 NOP10Q9NPE3 64 aaKnown RBP7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 PEMTQ9UBM1 199 aa7.58□□□□□ -1.2
PPP4R1-203ENST00000400556 NHLRC4P0CG21 123 aaPredicted RBP7.57□□□□□ -1.2
PPP4R1-203ENST00000400556 LINC00308Q8TCZ7 52 aa7.57□□□□□ -1.2
PPP4R1-203ENST00000400556 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
PPP4R1-203ENST00000400556 Q96MF0 132 aa7.57□□□□□ -1.2
PPP4R1-203ENST00000400556 CCDC179H3BU77 68 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 LST1O00453 97 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 GAGE7O76087 117 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 GAGE12FP0CL80 117 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 GAGE12GP0CL81 117 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 GAGE12IP0CL82 117 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 DSCR9P59020 149 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 HIST2H2BCQ6DN03 193 aa7.56□□□□□ -1.2
PPP4R1-203ENST00000400556 UBR5O95071 2799 aaPredicted RBP7.55□□□□□ -1.2
PPP4R1-203ENST00000400556 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
PPP4R1-203ENST00000400556 RS1O15537 224 aa7.55□□□□□ -1.2
PPP4R1-203ENST00000400556 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-203ENST00000400556 C11orf68Q9H3H3 251 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-203ENST00000400556 NDUFA1O15239 70 aa7.55□□□□□ -1.2
PPP4R1-203ENST00000400556 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-203ENST00000400556 BBC3Q96PG8 261 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 Q9HAA7 133 aa7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 YAE1D1Q9NRH1 226 aa7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 J3QLI3 93 aa7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 RPL36AP83881 106 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 RPL36ALQ969Q0 106 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 VWFP04275 2813 aa7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 TRGV2A0A075B6R0 118 aa7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 C4orf3Q8WVX3 66 aa7.54□□□□□ -1.2
PPP4R1-203ENST00000400556 GAGE6Q13070 117 aa7.53□□□□□ -1.2
PPP4R1-203ENST00000400556 HERVK_113P63121 156 aa7.53□□□□□ -1.2
PPP4R1-203ENST00000400556 BEAN1Q3B7T3 259 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms