RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
CDC42-203ENST00000400259 RPL36AP83881 106 aaKnown RBP11.25□□□□□ -0.61
CDC42-203ENST00000400259 RPL36ALQ969Q0 106 aaKnown RBP11.25□□□□□ -0.61
CDC42-203ENST00000400259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
CDC42-203ENST00000400259 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
CDC42-203ENST00000400259 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
CDC42-203ENST00000400259 RRN3P1Q2M238 152 aa11.24□□□□□ -0.61
CDC42-203ENST00000400259 SHISA2Q6UWI4 295 aa11.24□□□□□ -0.61
CDC42-203ENST00000400259 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
CDC42-203ENST00000400259 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
CDC42-203ENST00000400259 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
CDC42-203ENST00000400259 OTOGQ6ZRI0 2925 aa11.23□□□□□ -0.61
CDC42-203ENST00000400259 UBE2D3P61077 147 aa11.23□□□□□ -0.61
CDC42-203ENST00000400259 UBE2D2P62837 147 aa11.23□□□□□ -0.61
CDC42-203ENST00000400259 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDC42-203ENST00000400259 Q6ZUT4 128 aa11.23□□□□□ -0.61
CDC42-203ENST00000400259 INSL3P51460 131 aa11.22□□□□□ -0.61
CDC42-203ENST00000400259 UBE2D1P51668 147 aa11.21□□□□□ -0.61
CDC42-203ENST00000400259 NSD1Q96L73 2696 aaPredicted RBP11.2□□□□□ -0.62
CDC42-203ENST00000400259 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
CDC42-203ENST00000400259 CSDC2Q9Y534 153 aaKnown RBP11.2□□□□□ -0.62
CDC42-203ENST00000400259 F8W1H4 67 aa11.2□□□□□ -0.62
CDC42-203ENST00000400259 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
CDC42-203ENST00000400259 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
CDC42-203ENST00000400259 SBSPONQ8IVN8 264 aa11.2□□□□□ -0.62
CDC42-203ENST00000400259 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 TRBV6-4A0A1B0GX49 114 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 GAGE7O76087 117 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 GAGE12FP0CL80 117 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 GAGE12GP0CL81 117 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 GAGE12IP0CL82 117 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 IGHV3-64A0A075B6Q5 118 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
CDC42-203ENST00000400259 IGLV5-45A0A087WSX0 123 aa11.18□□□□□ -0.62
CDC42-203ENST00000400259 TIRAPP58753 221 aa11.18□□□□□ -0.62
CDC42-203ENST00000400259 C9orf66Q5T8R8 295 aa11.18□□□□□ -0.62
CDC42-203ENST00000400259 ERG28Q9UKR5 140 aa11.18□□□□□ -0.62
CDC42-203ENST00000400259 C2CD3Q4AC94 2353 aa11.18□□□□□ -0.62
CDC42-203ENST00000400259 FAM19A3Q7Z5A8 133 aa11.18□□□□□ -0.62
CDC42-203ENST00000400259 SS18L2Q9UHA2 77 aa11.18□□□□□ -0.62
CDC42-203ENST00000400259 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
CDC42-203ENST00000400259 GAGE4Q13068 117 aa11.17□□□□□ -0.62
CDC42-203ENST00000400259 GAGE5Q13069 117 aa11.17□□□□□ -0.62
CDC42-203ENST00000400259 GAGE13Q4V321 117 aa11.17□□□□□ -0.62
CDC42-203ENST00000400259 DGAT2L7PQ6IED9 249 aa11.17□□□□□ -0.62
CDC42-203ENST00000400259 H3BMG7 143 aa11.16□□□□□ -0.62
CDC42-203ENST00000400259 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
CDC42-203ENST00000400259 VSIG2Q96IQ7 327 aa11.16□□□□□ -0.62
CDC42-203ENST00000400259 CRLF1O75462 422 aa11.16□□□□□ -0.62
CDC42-203ENST00000400259 LINC00694P0DN24 101 aa11.16□□□□□ -0.62
CDC42-203ENST00000400259 FN1P02751 2386 aaKnown RBP11.16□□□□□ -0.62
CDC42-203ENST00000400259 GAGE6Q13070 117 aa11.15□□□□□ -0.62
CDC42-203ENST00000400259 SFTA2Q6UW10 78 aa11.15□□□□□ -0.62
CDC42-203ENST00000400259 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
CDC42-203ENST00000400259 KIR2DL5BQ8NHK3 375 aa11.15□□□□□ -0.62
CDC42-203ENST00000400259 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.62
CDC42-203ENST00000400259 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 HERV-K104P63124 156 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 FHL2Q14192 279 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 WFDC2Q14508 124 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 CITED1Q99966 193 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 H7C423 109 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 NOTCH2Q04721 2471 aa11.14□□□□□ -0.63
CDC42-203ENST00000400259 SMIM9A6NGZ8 99 aa11.13□□□□□ -0.63
CDC42-203ENST00000400259 APOMO95445 188 aa11.13□□□□□ -0.63
CDC42-203ENST00000400259 HERVK_113P63121 156 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 RNF183Q96D59 192 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 LITAFQ99732 161 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 X6R8D5 127 aa11.12□□□□□ -0.63
CDC42-203ENST00000400259 LOC100131303A0A0U1RQF7 123 aa11.11□□□□□ -0.63
CDC42-203ENST00000400259 CFC1BP0CG36 223 aa11.11□□□□□ -0.63
CDC42-203ENST00000400259 CFC1P0CG37 223 aa11.11□□□□□ -0.63
CDC42-203ENST00000400259 NDUFA12Q9UI09 145 aa11.11□□□□□ -0.63
CDC42-203ENST00000400259 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
CDC42-203ENST00000400259 HIVEP1P15822 2718 aa11.1□□□□□ -0.63
CDC42-203ENST00000400259 COX6A2Q02221 97 aa11.1□□□□□ -0.63
CDC42-203ENST00000400259 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
CDC42-203ENST00000400259 SH2D6Q7Z4S9 175 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 SPANXDQ9BXN6 97 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 PRO0461Q9UI25 63 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 A8MZ25 164 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 UBE2L6O14933 153 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 TMEM101Q96IK0 257 aa11.09□□□□□ -0.63
CDC42-203ENST00000400259 A4D1N5 150 aa11.08□□□□□ -0.64
CDC42-203ENST00000400259 TIMM17BO60830 172 aa11.08□□□□□ -0.64
CDC42-203ENST00000400259 MUSTN1Q8IVN3 82 aa11.08□□□□□ -0.64
CDC42-203ENST00000400259 ANAPC13Q9BS18 74 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms