RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 TSHBP01222 138 aa10.9□□□□□ -0.66
COL25A1-203ENST00000399132 SFTA2Q6UW10 78 aa10.9□□□□□ -0.66
COL25A1-203ENST00000399132 CRLF1O75462 422 aa10.9□□□□□ -0.66
COL25A1-203ENST00000399132 CEMP1Q6PRD7 247 aaPredicted RBP10.9□□□□□ -0.66
COL25A1-203ENST00000399132 MRPL23Q16540 153 aaKnown RBP10.89□□□□□ -0.67
COL25A1-203ENST00000399132 RNASE13Q5GAN3 156 aaKnown RBP10.89□□□□□ -0.67
COL25A1-203ENST00000399132 MEIG1Q5JSS6 88 aa10.89□□□□□ -0.67
COL25A1-203ENST00000399132 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
COL25A1-203ENST00000399132 NEXN-AS1Q8NBZ9 246 aa10.89□□□□□ -0.67
COL25A1-203ENST00000399132 CSDC2Q9Y534 153 aaKnown RBP10.89□□□□□ -0.67
COL25A1-203ENST00000399132 TRPT1Q86TN4 253 aaKnown RBP10.89□□□□□ -0.67
COL25A1-203ENST00000399132 A8MTW9 85 aa10.88□□□□□ -0.67
COL25A1-203ENST00000399132 H7C1H1 209 aa10.88□□□□□ -0.67
COL25A1-203ENST00000399132 SNCGO76070 127 aa10.88□□□□□ -0.67
COL25A1-203ENST00000399132 F8VRH5 84 aa10.88□□□□□ -0.67
COL25A1-203ENST00000399132 LOC107984156A0A0G2JMH3 177 aa10.87□□□□□ -0.67
COL25A1-203ENST00000399132 TRBV27A0A0K0K1C4 114 aa10.87□□□□□ -0.67
COL25A1-203ENST00000399132 IGLV1-51P01701 117 aa10.87□□□□□ -0.67
COL25A1-203ENST00000399132 ARL17AQ8IVW1 177 aa10.87□□□□□ -0.67
COL25A1-203ENST00000399132 ANKRD29Q8N6D5 301 aa10.87□□□□□ -0.67
COL25A1-203ENST00000399132 Q6ZTI0 123 aa10.86□□□□□ -0.67
COL25A1-203ENST00000399132 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
COL25A1-203ENST00000399132 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
COL25A1-203ENST00000399132 LINC01549A6NIU2 74 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 IGIPA6NJ69 53 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 A8MWV9 139 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
COL25A1-203ENST00000399132 SBSPONQ8IVN8 264 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 SPANXA1Q9NS26 97 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 IGHV3-64A0A075B6Q5 118 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 I3L3M4 83 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 NDUFA7O95182 113 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 Q6Q795 121 aa10.85□□□□□ -0.67
COL25A1-203ENST00000399132 PLNP26678 52 aa10.84□□□□□ -0.67
COL25A1-203ENST00000399132 UBE2D3P61077 147 aa10.84□□□□□ -0.67
COL25A1-203ENST00000399132 UBE2D2P62837 147 aa10.84□□□□□ -0.67
COL25A1-203ENST00000399132 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
COL25A1-203ENST00000399132 C11orf86A6NJI1 115 aa10.84□□□□□ -0.67
COL25A1-203ENST00000399132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.83□□□□□ -0.68
COL25A1-203ENST00000399132 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
COL25A1-203ENST00000399132 IGKV2-29A2NJV5 120 aaPredicted RBP10.83□□□□□ -0.68
COL25A1-203ENST00000399132 TMEM170BQ5T4T1 132 aa10.83□□□□□ -0.68
COL25A1-203ENST00000399132 TCL1BO95988 128 aa10.83□□□□□ -0.68
COL25A1-203ENST00000399132 TMEM126AQ9H061 195 aa10.83□□□□□ -0.68
COL25A1-203ENST00000399132 C19orf73Q9NVV2 129 aa10.83□□□□□ -0.68
COL25A1-203ENST00000399132 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
COL25A1-203ENST00000399132 LINC00482Q8N8I6 264 aa10.82□□□□□ -0.68
COL25A1-203ENST00000399132 C1orf43Q9BWL3 253 aa10.81□□□□□ -0.68
COL25A1-203ENST00000399132 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
COL25A1-203ENST00000399132 PMVKQ15126 192 aa10.81□□□□□ -0.68
COL25A1-203ENST00000399132 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.81□□□□□ -0.68
COL25A1-203ENST00000399132 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
COL25A1-203ENST00000399132 NDUFA11Q86Y39 141 aa10.8□□□□□ -0.68
COL25A1-203ENST00000399132 C20orf203Q8NBC4 194 aa10.8□□□□□ -0.68
COL25A1-203ENST00000399132 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
COL25A1-203ENST00000399132 STAB1Q9NY15 2570 aa10.8□□□□□ -0.68
COL25A1-203ENST00000399132 BEAN1Q3B7T3 259 aa10.79□□□□□ -0.68
COL25A1-203ENST00000399132 UBE2D1P51668 147 aa10.79□□□□□ -0.68
COL25A1-203ENST00000399132 SEC61GP60059 68 aa10.79□□□□□ -0.68
COL25A1-203ENST00000399132 DNAJC30Q96LL9 226 aa10.79□□□□□ -0.68
COL25A1-203ENST00000399132 TRGV2A0A075B6R0 118 aa10.78□□□□□ -0.68
COL25A1-203ENST00000399132 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
COL25A1-203ENST00000399132 SMIM9A6NGZ8 99 aa10.78□□□□□ -0.68
COL25A1-203ENST00000399132 A0A0J9YXV3 536 aa10.78□□□□□ -0.68
COL25A1-203ENST00000399132 LINC00694P0DN24 101 aa10.78□□□□□ -0.68
COL25A1-203ENST00000399132 TMEM263Q8WUH6 116 aaKnown RBP10.78□□□□□ -0.68
COL25A1-203ENST00000399132 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 LOC107984640A0A0U1RRK4 108 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 RS1O15537 224 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 SCGB1C2P0DMR2 95 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 C15orf53Q8NAA6 179 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 TMEM141Q96I45 108 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 TIMM17AQ99595 171 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.69
COL25A1-203ENST00000399132 MAST4O15021 2626 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 IGLV4-3A0A075B6K6 122 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 RHOHQ15669 191 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 PLEKHB2Q96CS7 222 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 PKD1L1Q8TDX9 2849 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 FBN1P35555 2871 aaKnown RBP10.76□□□□□ -0.69
COL25A1-203ENST00000399132 DEFB4AO15263 64 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 DEFB130BP0DP73 79 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 DEFB130AP0DP74 79 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 SCGB1D4Q6XE38 83 aa10.76□□□□□ -0.69
COL25A1-203ENST00000399132 SLC25A20O43772 301 aa10.75□□□□□ -0.69
COL25A1-203ENST00000399132 SLC25A29Q8N8R3 303 aa10.75□□□□□ -0.69
COL25A1-203ENST00000399132 TSPEAR-AS2P59090 65 aa10.75□□□□□ -0.69
COL25A1-203ENST00000399132 CHCHD5Q9BSY4 110 aa10.74□□□□□ -0.69
COL25A1-203ENST00000399132 PLAC8L1A1L4L8 177 aa10.74□□□□□ -0.69
COL25A1-203ENST00000399132 CSNK1G2-AS1Q8NCQ2 148 aa10.74□□□□□ -0.69
COL25A1-203ENST00000399132 CHCHD7Q9BUK0 85 aa10.74□□□□□ -0.69
COL25A1-203ENST00000399132 C9JAW5 83 aa10.72□□□□□ -0.69
COL25A1-203ENST00000399132 FAM104AQ969W3 186 aa10.72□□□□□ -0.69
COL25A1-203ENST00000399132 IL17DQ8TAD2 202 aa10.72□□□□□ -0.69
COL25A1-203ENST00000399132 A8MZ25 164 aa10.71□□□□□ -0.69
COL25A1-203ENST00000399132 NTN5Q8WTR8 489 aaPredicted RBP10.71□□□□□ -0.69
COL25A1-203ENST00000399132 SRSF9Q13242 221 aaKnown RBP eCLIP10.71□□□□□ -0.69
COL25A1-203ENST00000399132 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
COL25A1-203ENST00000399132 K7EQD1 137 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms