RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 LINC00467Q9BRT7 94 aa11.29□□□□□ -0.6
LSS-202ENST00000397728 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
LSS-202ENST00000397728 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
LSS-202ENST00000397728 PPDPFLQ8WWR9 84 aa11.28□□□□□ -0.6
LSS-202ENST00000397728 TRBV6-8A0A0A6YYG3 113 aa11.28□□□□□ -0.6
LSS-202ENST00000397728 G3V4G9 280 aa11.28□□□□□ -0.6
LSS-202ENST00000397728 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
LSS-202ENST00000397728 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
LSS-202ENST00000397728 M0QY20 66 aa11.28□□□□□ -0.6
LSS-202ENST00000397728 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.61
LSS-202ENST00000397728 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
LSS-202ENST00000397728 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
LSS-202ENST00000397728 Q8N2B8 174 aa11.26□□□□□ -0.61
LSS-202ENST00000397728 WDFY4Q6ZS81 3184 aa11.26□□□□□ -0.61
LSS-202ENST00000397728 C9JAW5 83 aa11.26□□□□□ -0.61
LSS-202ENST00000397728 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
LSS-202ENST00000397728 DAND5Q8N907 189 aa11.26□□□□□ -0.61
LSS-202ENST00000397728 SND1-IT1Q9HBX3 110 aa11.26□□□□□ -0.61
LSS-202ENST00000397728 PRO1854Q9UHT4 67 aa11.26□□□□□ -0.61
LSS-202ENST00000397728 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
LSS-202ENST00000397728 CLUHP3Q96NS8 147 aa11.26□□□□□ -0.61
LSS-202ENST00000397728 TDRG1Q3Y452 100 aa11.25□□□□□ -0.61
LSS-202ENST00000397728 CXCL5P42830 114 aa11.25□□□□□ -0.61
LSS-202ENST00000397728 MRGPRG-AS1Q2M3A8 158 aa11.25□□□□□ -0.61
LSS-202ENST00000397728 BVES-AS1Q5T3Y7 98 aa11.25□□□□□ -0.61
LSS-202ENST00000397728 A0A1W2PPM0 123 aa11.24□□□□□ -0.61
LSS-202ENST00000397728 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
LSS-202ENST00000397728 DEFB105AQ8NG35 78 aa11.24□□□□□ -0.61
LSS-202ENST00000397728 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
LSS-202ENST00000397728 TRAV12-1A0A0B4J245 112 aa11.23□□□□□ -0.61
LSS-202ENST00000397728 TRIOO75962 3097 aa11.23□□□□□ -0.61
LSS-202ENST00000397728 DSPP15924 2871 aaKnown RBP11.23□□□□□ -0.61
LSS-202ENST00000397728 LECT2O14960 151 aa11.23□□□□□ -0.61
LSS-202ENST00000397728 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
LSS-202ENST00000397728 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
LSS-202ENST00000397728 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
LSS-202ENST00000397728 RBX1P62877 108 aa11.22□□□□□ -0.61
LSS-202ENST00000397728 SETXQ7Z333 2677 aaKnown RBP11.22□□□□□ -0.61
LSS-202ENST00000397728 C9orf85Q96MD7 179 aa11.21□□□□□ -0.61
LSS-202ENST00000397728 UBE2AP49459 152 aa11.21□□□□□ -0.61
LSS-202ENST00000397728 Q6ZTC4 211 aa11.21□□□□□ -0.61
LSS-202ENST00000397728 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
LSS-202ENST00000397728 CEND1Q8N111 149 aa11.2□□□□□ -0.62
LSS-202ENST00000397728 U3KQK5 164 aa11.2□□□□□ -0.62
LSS-202ENST00000397728 XIRP2A4UGR9 3374 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 IFITM1P13164 125 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 LELP1Q5T871 98 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 K7ERJ3 54 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 ODF1Q14990 250 aa11.19□□□□□ -0.62
LSS-202ENST00000397728 NCR3O14931 201 aa11.18□□□□□ -0.62
LSS-202ENST00000397728 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
LSS-202ENST00000397728 H7C423 109 aa11.18□□□□□ -0.62
LSS-202ENST00000397728 BPTFQ12830 3046 aa11.18□□□□□ -0.62
LSS-202ENST00000397728 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
LSS-202ENST00000397728 RNF185Q96GF1 192 aa11.17□□□□□ -0.62
LSS-202ENST00000397728 MUSTN1Q8IVN3 82 aa11.17□□□□□ -0.62
LSS-202ENST00000397728 C9orf153Q5TBE3 101 aa11.17□□□□□ -0.62
LSS-202ENST00000397728 MIAQ16674 131 aa11.16□□□□□ -0.62
LSS-202ENST00000397728 IGLV4-3A0A075B6K6 122 aa11.16□□□□□ -0.62
LSS-202ENST00000397728 SOCS3O14543 225 aa11.16□□□□□ -0.62
LSS-202ENST00000397728 FSHBP01225 129 aa11.16□□□□□ -0.62
LSS-202ENST00000397728 NFE4Q86UQ8 179 aa11.16□□□□□ -0.62
LSS-202ENST00000397728 TRBV27A0A0K0K1C4 114 aa11.16□□□□□ -0.62
LSS-202ENST00000397728 E9PLD3 99 aa11.16□□□□□ -0.62
LSS-202ENST00000397728 CDH23Q9H251 3354 aa11.15□□□□□ -0.62
LSS-202ENST00000397728 AGRNO00468 2067 aa11.15□□□□□ -0.62
LSS-202ENST00000397728 CITED1Q99966 193 aa11.15□□□□□ -0.62
LSS-202ENST00000397728 A4D1N5 150 aa11.15□□□□□ -0.62
LSS-202ENST00000397728 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
LSS-202ENST00000397728 CFC1P0CG37 223 aa11.15□□□□□ -0.62
LSS-202ENST00000397728 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
LSS-202ENST00000397728 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
LSS-202ENST00000397728 CRYBA4P53673 196 aa11.14□□□□□ -0.63
LSS-202ENST00000397728 TRBV6-5A0A0K0K1A5 114 aa11.14□□□□□ -0.63
LSS-202ENST00000397728 CDPF1Q6NVV7 123 aa11.14□□□□□ -0.63
LSS-202ENST00000397728 HIST1H4AP62805 103 aaKnown RBP11.13□□□□□ -0.63
LSS-202ENST00000397728 C12orf74Q32Q52 190 aa11.13□□□□□ -0.63
LSS-202ENST00000397728 UFSP1Q6NVU6 142 aa11.13□□□□□ -0.63
LSS-202ENST00000397728 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
LSS-202ENST00000397728 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
LSS-202ENST00000397728 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
LSS-202ENST00000397728 ETDBQ3ZM63 59 aa11.12□□□□□ -0.63
LSS-202ENST00000397728 Q6ZVH6 145 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 TSHBP01222 138 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 UBE2D3P61077 147 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 UBE2D2P62837 147 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 DSCR8Q96T75 97 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 LRCOL1A6NCL2 159 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 PIK3CD-AS1Q5SR53 167 aa11.11□□□□□ -0.63
LSS-202ENST00000397728 NHLRC4P0CG21 123 aaPredicted RBP11.1□□□□□ -0.63
LSS-202ENST00000397728 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
LSS-202ENST00000397728 GAS8-AS1O95177 125 aa11.1□□□□□ -0.63
LSS-202ENST00000397728 FHL3Q13643 280 aa11.1□□□□□ -0.63
LSS-202ENST00000397728 BEAN1Q3B7T3 259 aa11.1□□□□□ -0.63
LSS-202ENST00000397728 A0A087WZ39 114 aa11.1□□□□□ -0.63
LSS-202ENST00000397728 RPL32P62910 135 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms