RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZNF25P17030 456 aaPredicted RBP11.57□□□□□ -0.56
TSPAN4-205ENST00000397406 TCTAP57738 103 aa11.57□□□□□ -0.56
TSPAN4-205ENST00000397406 SMAGPQ0VAQ4 97 aa11.57□□□□□ -0.56
TSPAN4-205ENST00000397406 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
TSPAN4-205ENST00000397406 FRAS1Q86XX4 4008 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 TRAV8-6A0A0B4J262 113 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 KRTDAPP60985 99 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 AMMECR1LQ6DCA0 310 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 Q6ZUT4 128 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 MAP1LC3CQ9BXW4 147 aa11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 MRPS16Q9Y3D3 137 aaKnown RBP11.56□□□□□ -0.56
TSPAN4-205ENST00000397406 A0A1B0GUV1 79 aa11.55□□□□□ -0.56
TSPAN4-205ENST00000397406 SYS1-DBNDD2H3BUS1 97 aa11.55□□□□□ -0.56
TSPAN4-205ENST00000397406 CCL18P55774 89 aa11.55□□□□□ -0.56
TSPAN4-205ENST00000397406 Q6ZN92 141 aa11.55□□□□□ -0.56
TSPAN4-205ENST00000397406 WFDC10BQ8IUB3 73 aa11.55□□□□□ -0.56
TSPAN4-205ENST00000397406 DNAH10Q8IVF4 4471 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 IGLV4-60A0A075B6I1 120 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 TMEM262E9PQX1 116 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 RBX1P62877 108 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 DGAT2L7PQ6IED9 249 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 SPATA12Q7Z6I5 190 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 Q8N3U1 123 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 Q8N976 141 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 OR5A1Q8NGJ0 315 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 CDC42SE2Q9NRR3 84 aa11.54□□□□□ -0.56
TSPAN4-205ENST00000397406 PRSS1P07477 247 aa11.53□□□□□ -0.56
TSPAN4-205ENST00000397406 PKIAP61925 76 aa11.53□□□□□ -0.56
TSPAN4-205ENST00000397406 ZC2HC1BQ5TFG8 222 aa11.53□□□□□ -0.56
TSPAN4-205ENST00000397406 AMELXQ99217 191 aa11.53□□□□□ -0.56
TSPAN4-205ENST00000397406 AKR1D1P51857 326 aa11.52□□□□□ -0.56
TSPAN4-205ENST00000397406 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.56
TSPAN4-205ENST00000397406 PAPPA-AS1Q5QFB9 102 aa11.52□□□□□ -0.56
TSPAN4-205ENST00000397406 ZNF664Q8N3J9 261 aa11.52□□□□□ -0.56
TSPAN4-205ENST00000397406 UPK3BQ9BT76 320 aa11.52□□□□□ -0.56
TSPAN4-205ENST00000397406 A0A087WX48 190 aa11.52□□□□□ -0.57
TSPAN4-205ENST00000397406 TRAV12-1A0A0B4J245 112 aa11.52□□□□□ -0.57
TSPAN4-205ENST00000397406 H0Y8G0 127 aa11.52□□□□□ -0.57
TSPAN4-205ENST00000397406 PMVKQ15126 192 aa11.52□□□□□ -0.57
TSPAN4-205ENST00000397406 PET117Q6UWS5 81 aa11.52□□□□□ -0.57
TSPAN4-205ENST00000397406 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
TSPAN4-205ENST00000397406 VCX2Q9H322 139 aa11.51□□□□□ -0.57
TSPAN4-205ENST00000397406 CST9LQ9H4G1 147 aa11.51□□□□□ -0.57
TSPAN4-205ENST00000397406 PRSS29PA6NIE9 313 aa11.5□□□□□ -0.57
TSPAN4-205ENST00000397406 ODF1Q14990 250 aa11.5□□□□□ -0.57
TSPAN4-205ENST00000397406 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
TSPAN4-205ENST00000397406 LINC01556Q5JQF7 62 aa11.49□□□□□ -0.57
TSPAN4-205ENST00000397406 LINC01545Q5VT33 79 aa11.49□□□□□ -0.57
TSPAN4-205ENST00000397406 SIVA1O15304 175 aa11.48□□□□□ -0.57
TSPAN4-205ENST00000397406 IGHV3-30P01768 117 aa11.48□□□□□ -0.57
TSPAN4-205ENST00000397406 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
TSPAN4-205ENST00000397406 DNAH10OSP0CZ25 163 aa11.48□□□□□ -0.57
TSPAN4-205ENST00000397406 IGHV3-30-3P0DP02 117 aa11.48□□□□□ -0.57
TSPAN4-205ENST00000397406 IGHV3-30-5P0DP03 117 aa11.48□□□□□ -0.57
TSPAN4-205ENST00000397406 JOSD1Q15040 202 aaPredicted RBP11.48□□□□□ -0.57
TSPAN4-205ENST00000397406 ANGP03950 147 aaKnown RBP11.47□□□□□ -0.57
TSPAN4-205ENST00000397406 PYY3Q5JQD4 70 aa11.47□□□□□ -0.57
TSPAN4-205ENST00000397406 PMCHL2Q9BQD1 86 aa11.47□□□□□ -0.57
TSPAN4-205ENST00000397406 DNAH6Q9C0G6 4158 aa11.47□□□□□ -0.57
TSPAN4-205ENST00000397406 UBE2DNLQ8IWF7 75 aa11.46□□□□□ -0.57
TSPAN4-205ENST00000397406 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
TSPAN4-205ENST00000397406 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.57
TSPAN4-205ENST00000397406 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
TSPAN4-205ENST00000397406 IGLV4-69A0A075B6H9 119 aa11.45□□□□□ -0.58
TSPAN4-205ENST00000397406 C20orf202A1L168 122 aa11.45□□□□□ -0.58
TSPAN4-205ENST00000397406 F8VRH5 84 aa11.45□□□□□ -0.58
TSPAN4-205ENST00000397406 UBE2D1P51668 147 aa11.45□□□□□ -0.58
TSPAN4-205ENST00000397406 LINC00269Q8N2A0 174 aa11.45□□□□□ -0.58
TSPAN4-205ENST00000397406 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
TSPAN4-205ENST00000397406 SCGB1D1O95968 90 aa11.44□□□□□ -0.58
TSPAN4-205ENST00000397406 Q9H8V8 135 aa11.44□□□□□ -0.58
TSPAN4-205ENST00000397406 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
TSPAN4-205ENST00000397406 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
TSPAN4-205ENST00000397406 FAM19A3Q7Z5A8 133 aa11.43□□□□□ -0.58
TSPAN4-205ENST00000397406 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
TSPAN4-205ENST00000397406 IGKV3OR2-268A0A0C4DH90 116 aa11.43□□□□□ -0.58
TSPAN4-205ENST00000397406 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
TSPAN4-205ENST00000397406 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
TSPAN4-205ENST00000397406 REG3AQ06141 175 aa11.43□□□□□ -0.58
TSPAN4-205ENST00000397406 LINC00959A0A1B0GUT2 108 aa11.42□□□□□ -0.58
TSPAN4-205ENST00000397406 DPM2O94777 84 aa11.42□□□□□ -0.58
TSPAN4-205ENST00000397406 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
TSPAN4-205ENST00000397406 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
TSPAN4-205ENST00000397406 NFE4Q86UQ8 179 aa11.42□□□□□ -0.58
TSPAN4-205ENST00000397406 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
TSPAN4-205ENST00000397406 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
TSPAN4-205ENST00000397406 IGKCP01834 107 aa11.41□□□□□ -0.58
TSPAN4-205ENST00000397406 PLNP26678 52 aa11.41□□□□□ -0.58
TSPAN4-205ENST00000397406 DNAH2Q9P225 4427 aa11.41□□□□□ -0.58
TSPAN4-205ENST00000397406 CDPF1Q6NVV7 123 aa11.4□□□□□ -0.58
TSPAN4-205ENST00000397406 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
TSPAN4-205ENST00000397406 CHAC1Q9BUX1 264 aa11.4□□□□□ -0.58
TSPAN4-205ENST00000397406 SMIM6P0DI80 62 aa11.39□□□□□ -0.59
TSPAN4-205ENST00000397406 FAT2Q9NYQ8 4349 aa11.38□□□□□ -0.59
TSPAN4-205ENST00000397406 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
TSPAN4-205ENST00000397406 CCL25O15444 150 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms