RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 RPL39P62891 51 aaKnown RBP14.33□□□□□ -0.12
FXN-202ENST00000396364 LINC00336Q6ZUF6 198 aa14.33□□□□□ -0.12
FXN-202ENST00000396364 ZNF664Q8N3J9 261 aa14.33□□□□□ -0.12
FXN-202ENST00000396364 CHCHD1Q96BP2 118 aaKnown RBP14.33□□□□□ -0.12
FXN-202ENST00000396364 PYGO1Q9Y3Y4 419 aa14.33□□□□□ -0.12
FXN-202ENST00000396364 CDC42SE2Q9NRR3 84 aa14.32□□□□□ -0.12
FXN-202ENST00000396364 NPSP0C0P6 89 aa14.31□□□□□ -0.12
FXN-202ENST00000396364 PAPPA-AS1Q5QFB9 102 aa14.31□□□□□ -0.12
FXN-202ENST00000396364 CLPSL2Q6UWE3 100 aa14.31□□□□□ -0.12
FXN-202ENST00000396364 ENHOQ6UWT2 76 aa14.31□□□□□ -0.12
FXN-202ENST00000396364 Q6ZN92 141 aa14.31□□□□□ -0.12
FXN-202ENST00000396364 IGKV2D-24A0A075B6R9 120 aa14.3□□□□□ -0.12
FXN-202ENST00000396364 MRPS36P82909 103 aaKnown RBP14.3□□□□□ -0.12
FXN-202ENST00000396364 TOMM6Q96B49 74 aa14.3□□□□□ -0.12
FXN-202ENST00000396364 HYDINQ4G0P3 5121 aa14.3□□□□□ -0.12
FXN-202ENST00000396364 IGKV3OR2-268A0A0C4DH90 116 aa14.28□□□□□ -0.12
FXN-202ENST00000396364 CCL25O15444 150 aa14.28□□□□□ -0.12
FXN-202ENST00000396364 RYR2Q92736 4967 aa14.28□□□□□ -0.12
FXN-202ENST00000396364 C1orf196B1AJZ1 125 aa14.27□□□□□ -0.13
FXN-202ENST00000396364 HSBP1O75506 76 aa14.27□□□□□ -0.13
FXN-202ENST00000396364 HBDP02042 147 aa14.27□□□□□ -0.13
FXN-202ENST00000396364 SS18Q15532 418 aa14.27□□□□□ -0.13
FXN-202ENST00000396364 TMEM141Q96I45 108 aa14.27□□□□□ -0.13
FXN-202ENST00000396364 SCGB3A1Q96QR1 104 aa14.27□□□□□ -0.13
FXN-202ENST00000396364 TIMM17AQ99595 171 aa14.27□□□□□ -0.13
FXN-202ENST00000396364 RTL8CO15255 209 aa14.26□□□□□ -0.13
FXN-202ENST00000396364 Q6ZUT4 128 aa14.26□□□□□ -0.13
FXN-202ENST00000396364 ERASQ7Z444 233 aa14.26□□□□□ -0.13
FXN-202ENST00000396364 C2orf88Q9BSF0 95 aa14.26□□□□□ -0.13
FXN-202ENST00000396364 EREGO14944 169 aa14.25□□□□□ -0.13
FXN-202ENST00000396364 TEX43Q6ZNM6 134 aa14.25□□□□□ -0.13
FXN-202ENST00000396364 Q6ZRN7 208 aaPredicted RBP14.25□□□□□ -0.13
FXN-202ENST00000396364 URB1-AS1Q96HZ7 61 aa14.24□□□□□ -0.13
FXN-202ENST00000396364 VCX2Q9H322 139 aa14.24□□□□□ -0.13
FXN-202ENST00000396364 IGLV10-54A0A075B6I4 117 aa14.23□□□□□ -0.13
FXN-202ENST00000396364 IGLV4-3A0A075B6K6 122 aa14.23□□□□□ -0.13
FXN-202ENST00000396364 LINC00959A0A1B0GUT2 108 aa14.23□□□□□ -0.13
FXN-202ENST00000396364 PRSS29PA6NIE9 313 aa14.23□□□□□ -0.13
FXN-202ENST00000396364 IGIPA6NJ69 53 aa14.23□□□□□ -0.13
FXN-202ENST00000396364 IFITM10A6NMD0 228 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BKO60814 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BJP06899 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BOP23527 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BBP33778 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BDP58876 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BCP62807 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST2H2BEQ16778 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BHQ93079 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BNQ99877 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 HIST1H2BMQ99879 126 aa14.22□□□□□ -0.13
FXN-202ENST00000396364 ATP5LO75964 103 aa14.21□□□□□ -0.13
FXN-202ENST00000396364 RNASE13Q5GAN3 156 aaKnown RBP14.21□□□□□ -0.13
FXN-202ENST00000396364 TRAV13-1A0A0B4J241 112 aa14.2□□□□□ -0.14
FXN-202ENST00000396364 SERF1AO75920 110 aa14.2□□□□□ -0.14
FXN-202ENST00000396364 CHCHD10Q8WYQ3 142 aaPredicted RBP14.2□□□□□ -0.14
FXN-202ENST00000396364 OPRPNQ99935 248 aaPredicted RBP14.2□□□□□ -0.14
FXN-202ENST00000396364 PMCHL1Q16048 86 aa14.19□□□□□ -0.14
FXN-202ENST00000396364 XCL1P47992 114 aa14.17□□□□□ -0.14
FXN-202ENST00000396364 TNP2Q05952 138 aa14.17□□□□□ -0.14
FXN-202ENST00000396364 A0A096LNJ9 63 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 GAGE12HA6NDE8 117 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 SEC11AP67812 179 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 C14orf177Q52M58 125 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 PDZD11Q5EBL8 140 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 CD164L2Q6UWJ8 174 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 AMELXQ99217 191 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 RYR3Q15413 4870 aa14.16□□□□□ -0.14
FXN-202ENST00000396364 CFAP161Q6P656 301 aa14.15□□□□□ -0.14
FXN-202ENST00000396364 FAM104AQ969W3 186 aa14.15□□□□□ -0.14
FXN-202ENST00000396364 A0A087WTM6 91 aa14.14□□□□□ -0.15
FXN-202ENST00000396364 PMVKQ15126 192 aa14.14□□□□□ -0.15
FXN-202ENST00000396364 LEPROTL1O95214 131 aa14.13□□□□□ -0.15
FXN-202ENST00000396364 FAM19A2Q8N3H0 131 aa14.13□□□□□ -0.15
FXN-202ENST00000396364 BAALCQ8WXS3 180 aa14.13□□□□□ -0.15
FXN-202ENST00000396364 HSPB8Q9UJY1 196 aa14.13□□□□□ -0.15
FXN-202ENST00000396364 KRTAP26-1Q6PEX3 210 aa14.12□□□□□ -0.15
FXN-202ENST00000396364 DNAH2Q9P225 4427 aa14.12□□□□□ -0.15
FXN-202ENST00000396364 LRCOL1A6NCL2 159 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 COX7A2LO14548 114 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 MALP21145 153 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 UBE2D1P51668 147 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 NDUFA6P56556 154 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 LINC00310P59036 64 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 COA6Q5JTJ3 125 aaKnown RBP14.11□□□□□ -0.15
FXN-202ENST00000396364 LINC00173Q6ZV60 143 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 IFI27L1Q96BM0 104 aa14.11□□□□□ -0.15
FXN-202ENST00000396364 PRSS1P07477 247 aa14.1□□□□□ -0.15
FXN-202ENST00000396364 FOXI1Q12951 378 aa14.1□□□□□ -0.15
FXN-202ENST00000396364 MAPKAPK5-AS1Q8N8E1 139 aa14.1□□□□□ -0.15
FXN-202ENST00000396364 GEMIN7Q9H840 131 aaKnown RBP14.1□□□□□ -0.15
FXN-202ENST00000396364 APOMO95445 188 aa14.09□□□□□ -0.15
FXN-202ENST00000396364 HERVK_113P63121 156 aa14.09□□□□□ -0.15
FXN-202ENST00000396364 CST9LQ9H4G1 147 aa14.09□□□□□ -0.15
FXN-202ENST00000396364 FRAS1Q86XX4 4008 aa14.09□□□□□ -0.15
FXN-202ENST00000396364 USP17L23D6RBM5 183 aa14.08□□□□□ -0.16
FXN-202ENST00000396364 LECT2O14960 151 aa14.08□□□□□ -0.16
FXN-202ENST00000396364 LINC00242Q5T6M2 205 aa14.08□□□□□ -0.16
FXN-202ENST00000396364 FAM19A3Q7Z5A8 133 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms