RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 H3BUT2 72 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 LY6G6DO95868 133 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 RNF183Q96D59 192 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 NFE4Q86UQ8 179 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 BAALCQ8WXS3 180 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 C1orf43Q9BWL3 253 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 IGHV3-73A0A0B4J1V6 119 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 TRAV26-2A0A0B4J265 109 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 A0A1B0GWB2 263 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 HTN3P15516 51 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 ODF3L2Q3SX64 289 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 TMEM126AQ9H061 195 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 CST9LQ9H4G1 147 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE12JA6NER3 117 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 LINC00158P58513 81 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE4Q13068 117 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE5Q13069 117 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 GYPEP15421 78 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 VSIG2Q96IQ7 327 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 A0A1B0GUV1 79 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 C9orf118A6NHY6 69 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 CRYGDP07320 174 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 CDPF1Q6NVV7 123 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 NEXN-AS1Q8NBZ9 246 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 RPL39LQ96EH5 51 aaKnown RBP2.5□□□□□ -2.01
VPS13C-203ENST00000395896 SNHG12Q9BXW3 62 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 CFAP126Q5VTH2 177 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 MIAQ16674 131 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 BEAN1Q3B7T3 259 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 IGKV3OR2-268A0A0C4DH90 116 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 DKK2Q9UBU2 259 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 COX17Q14061 63 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 SPATA25Q9BR10 227 aa2.5□□□□□ -2.01
VPS13C-203ENST00000395896 CEND1Q8N111 149 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 TRBV6-8A0A0A6YYG3 113 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 COX7A2LO14548 114 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 OR13C6PQ8NH95 151 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 FAM19A4Q96LR4 140 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 RNF224P0DH78 156 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 C15orf53Q8NAA6 179 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 WFDC9Q8NEX5 89 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 A0A096LNT2 108 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 FXYD7P58549 80 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 DEFB135Q30KP9 77 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 RNASE8Q8TDE3 154 aaKnown RBP2.49□□□□□ -2.01
VPS13C-203ENST00000395896 H7C2G1 150 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 PSCAO43653 123 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 KRTAP10-9P60411 292 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 C14orf177Q52M58 125 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 RS1O15537 224 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 SPRY2O43597 315 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 SPANXCQ9NY87 97 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 IBA57-AS1B1ANH7 110 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 SPANXB1Q9NS25 103 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-203ENST00000395896 KLK5Q9Y337 293 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-203ENST00000395896 IGHV3-38A0A0C4DH36 116 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 RNF185Q96GF1 192 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 C11orf45Q8TAV5 145 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 Q6ZS46 218 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 Q71RC1 249 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-203ENST00000395896 PHLDA1Q8WV24 401 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-203ENST00000395896 PGPEP1Q9NXJ5 209 aa2.49□□□□□ -2.01
VPS13C-203ENST00000395896 A0A1W2PPM0 123 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 A8MTW9 85 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 H3BNG1 76 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 PDE6GP18545 87 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 A4D1N5 150 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 F8WDY8 70 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 AMTNQ6UX39 209 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 IGHV3-30-3P0DP02 117 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 UBE2DNLQ8IWF7 75 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 ACYP1P07311 99 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 GDF5OSQ5U4N7 250 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 LINC01546A6NGU7 62 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 OCIAD2Q56VL3 154 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 C20orf173Q96LM9 149 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 CARD19Q96LW7 228 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 Q9H8V8 135 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 EREGO14944 169 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 GATA1P15976 413 aaPredicted RBP2.48□□□□□ -2.01
VPS13C-203ENST00000395896 ZFAND6Q6FIF0 208 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 Q6ZTI0 123 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 LINC00482Q8N8I6 264 aa2.48□□□□□ -2.01
VPS13C-203ENST00000395896 A0A0J9YXV3 536 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 CFC1BP0CG36 223 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 CFC1P0CG37 223 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 RNF151Q2KHN1 245 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 TTC32Q5I0X7 151 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 FAM222AQ5U5X8 452 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 IGIPA6NJ69 53 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 LINC01561Q8N1V8 128 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 A0A0B4J2C4 111 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 JMJD7-PLA2G4BH0Y9G9 81 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 H3BT86 120 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 NUPR1O60356 82 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 IGLV4-3A0A075B6K6 122 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 POM121L12Q8N7R1 296 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 NDUFA1O15239 70 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 LELP1Q5T871 98 aa2.47□□□□□ -2.01
VPS13C-203ENST00000395896 PCP2Q8IVA1 136 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms