RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TCTAP57738 103 aa10.63□□□□□ -0.71
SCAF11-204ENST00000395454 MRPS36P82909 103 aaKnown RBP10.63□□□□□ -0.71
SCAF11-204ENST00000395454 GTSF1LQ9H1H1 148 aa10.63□□□□□ -0.71
SCAF11-204ENST00000395454 C11orf68Q9H3H3 251 aaKnown RBP10.63□□□□□ -0.71
SCAF11-204ENST00000395454 HSD52Q0P140 79 aa10.62□□□□□ -0.71
SCAF11-204ENST00000395454 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
SCAF11-204ENST00000395454 PHLDA1Q8WV24 401 aaPredicted RBP10.62□□□□□ -0.71
SCAF11-204ENST00000395454 IGHV3-38A0A0C4DH36 116 aa10.62□□□□□ -0.71
SCAF11-204ENST00000395454 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
SCAF11-204ENST00000395454 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
SCAF11-204ENST00000395454 VCX2Q9H322 139 aa10.62□□□□□ -0.71
SCAF11-204ENST00000395454 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
SCAF11-204ENST00000395454 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
SCAF11-204ENST00000395454 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
SCAF11-204ENST00000395454 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
SCAF11-204ENST00000395454 CELA1Q9UNI1 258 aa10.61□□□□□ -0.71
SCAF11-204ENST00000395454 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
SCAF11-204ENST00000395454 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
SCAF11-204ENST00000395454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.6□□□□□ -0.71
SCAF11-204ENST00000395454 IGKV2-29A2NJV5 120 aaPredicted RBP10.6□□□□□ -0.71
SCAF11-204ENST00000395454 SEC11AP67812 179 aa10.6□□□□□ -0.71
SCAF11-204ENST00000395454 CHAC1Q9BUX1 264 aa10.6□□□□□ -0.71
SCAF11-204ENST00000395454 TRGV4A0A0C4DH28 118 aa10.59□□□□□ -0.71
SCAF11-204ENST00000395454 SPART-AS1P0CW21 52 aa10.59□□□□□ -0.71
SCAF11-204ENST00000395454 HERVK_113P61574 105 aa10.59□□□□□ -0.71
SCAF11-204ENST00000395454 TRAV8-6A0A0B4J262 113 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 GAGE12JA6NER3 117 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 GAGE1Q13065 139 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 GAGE4Q13068 117 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 GAGE5Q13069 117 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-204ENST00000395454 MYMXA0A1B0GTQ4 84 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-204ENST00000395454 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
SCAF11-204ENST00000395454 TMEM223A0PJW6 202 aa10.57□□□□□ -0.72
SCAF11-204ENST00000395454 H7C423 109 aa10.57□□□□□ -0.72
SCAF11-204ENST00000395454 Q6ZUT4 128 aa10.57□□□□□ -0.72
SCAF11-204ENST00000395454 A0A0J9YXV3 536 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 TEX48A0A1B0GUV7 120 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 TAL2Q16559 108 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 TINCRA0A1B0GVN0 87 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 DAD1P61803 113 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 FAM19A3Q7Z5A8 133 aa10.56□□□□□ -0.72
SCAF11-204ENST00000395454 DNAH7Q8WXX0 4024 aa10.55□□□□□ -0.72
SCAF11-204ENST00000395454 NANOS2P60321 138 aaKnown RBP10.55□□□□□ -0.72
SCAF11-204ENST00000395454 TMEM170BQ5T4T1 132 aa10.55□□□□□ -0.72
SCAF11-204ENST00000395454 ORAOV1Q8WV07 137 aa10.55□□□□□ -0.72
SCAF11-204ENST00000395454 TM2D2Q9BX73 214 aa10.55□□□□□ -0.72
SCAF11-204ENST00000395454 IGLV5-45A0A087WSX0 123 aa10.54□□□□□ -0.72
SCAF11-204ENST00000395454 UBE2D1P51668 147 aa10.54□□□□□ -0.72
SCAF11-204ENST00000395454 C12orf74Q32Q52 190 aa10.54□□□□□ -0.72
SCAF11-204ENST00000395454 TMEM243Q9BU79 118 aa10.54□□□□□ -0.72
SCAF11-204ENST00000395454 TAX1BP3O14907 124 aa10.53□□□□□ -0.72
SCAF11-204ENST00000395454 TSPEAR-AS2P59090 65 aa10.53□□□□□ -0.72
SCAF11-204ENST00000395454 Q6ZTC4 211 aa10.53□□□□□ -0.72
SCAF11-204ENST00000395454 PRO0255Q9UI72 69 aa10.53□□□□□ -0.72
SCAF11-204ENST00000395454 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
SCAF11-204ENST00000395454 CSMD3Q7Z407 3707 aa10.53□□□□□ -0.72
SCAF11-204ENST00000395454 LEPROTO15243 131 aa10.52□□□□□ -0.72
SCAF11-204ENST00000395454 TIRAPP58753 221 aa10.52□□□□□ -0.72
SCAF11-204ENST00000395454 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
SCAF11-204ENST00000395454 ZNF815PA8K554 130 aa10.52□□□□□ -0.73
SCAF11-204ENST00000395454 ZNF25P17030 456 aaPredicted RBP10.52□□□□□ -0.73
SCAF11-204ENST00000395454 CDC42SE2Q9NRR3 84 aa10.52□□□□□ -0.73
SCAF11-204ENST00000395454 J3QQQ9 107 aa10.51□□□□□ -0.73
SCAF11-204ENST00000395454 HTN3P15516 51 aa10.51□□□□□ -0.73
SCAF11-204ENST00000395454 RNASE13Q5GAN3 156 aaKnown RBP10.51□□□□□ -0.73
SCAF11-204ENST00000395454 DGAT2L7PQ6IED9 249 aa10.51□□□□□ -0.73
SCAF11-204ENST00000395454 A6NDN8 102 aa10.5□□□□□ -0.73
SCAF11-204ENST00000395454 PLEKHB2Q96CS7 222 aa10.5□□□□□ -0.73
SCAF11-204ENST00000395454 CEND1Q8N111 149 aa10.5□□□□□ -0.73
SCAF11-204ENST00000395454 ATP5G1P05496 136 aa10.49□□□□□ -0.73
SCAF11-204ENST00000395454 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
SCAF11-204ENST00000395454 A0A0J9YY99 117 aa10.48□□□□□ -0.73
SCAF11-204ENST00000395454 GYPEP15421 78 aa10.48□□□□□ -0.73
SCAF11-204ENST00000395454 FXYD2P54710 66 aa10.48□□□□□ -0.73
SCAF11-204ENST00000395454 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
SCAF11-204ENST00000395454 LGALS3P17931 250 aaKnown RBP10.48□□□□□ -0.73
SCAF11-204ENST00000395454 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
SCAF11-204ENST00000395454 SPANXB1Q9NS25 103 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-204ENST00000395454 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 F5H768 121 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 H3BRM9 83 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 UBE2L6O14933 153 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 IGHV3-30-3P0DP02 117 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 HERVK_113P63121 156 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
SCAF11-204ENST00000395454 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
SCAF11-204ENST00000395454 GCSHP23434 173 aa10.46□□□□□ -0.73
SCAF11-204ENST00000395454 GEMIN7Q9H840 131 aaKnown RBP10.46□□□□□ -0.73
SCAF11-204ENST00000395454 STARD9Q9P2P6 4700 aa10.46□□□□□ -0.73
SCAF11-204ENST00000395454 AMMECR1LQ6DCA0 310 aa10.46□□□□□ -0.74
SCAF11-204ENST00000395454 Q6ZVH6 145 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms