RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 ESDP10768 282 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 AMMECR1LQ6DCA0 310 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 TMEM191AQ9H0A3 160 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 HIGD1CA8MV81 97 aa8.6□□□□□ -1.03
SCAF11-203ENST00000395453 ZNF25P17030 456 aaPredicted RBP8.6□□□□□ -1.03
SCAF11-203ENST00000395453 PMCHP20382 165 aa8.6□□□□□ -1.03
SCAF11-203ENST00000395453 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
SCAF11-203ENST00000395453 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
SCAF11-203ENST00000395453 RNASEKQ6P5S7 137 aaKnown RBP8.6□□□□□ -1.03
SCAF11-203ENST00000395453 CHCHD10Q8WYQ3 142 aaPredicted RBP8.6□□□□□ -1.03
SCAF11-203ENST00000395453 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
SCAF11-203ENST00000395453 IGKV3OR2-268A0A0C4DH90 116 aa8.59□□□□□ -1.03
SCAF11-203ENST00000395453 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
SCAF11-203ENST00000395453 TSHBP01222 138 aa8.59□□□□□ -1.03
SCAF11-203ENST00000395453 RAB4AP20338 218 aa8.59□□□□□ -1.03
SCAF11-203ENST00000395453 BORCS7Q96B45 105 aa8.59□□□□□ -1.03
SCAF11-203ENST00000395453 ST20Q9HBF5 79 aa8.59□□□□□ -1.03
SCAF11-203ENST00000395453 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
SCAF11-203ENST00000395453 RPS10P46783 165 aaKnown RBP8.58□□□□□ -1.04
SCAF11-203ENST00000395453 OR5A1Q8NGJ0 315 aa8.58□□□□□ -1.04
SCAF11-203ENST00000395453 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
SCAF11-203ENST00000395453 V9GYV3 84 aa8.58□□□□□ -1.04
SCAF11-203ENST00000395453 A0A087WYN8 130 aa8.57□□□□□ -1.04
SCAF11-203ENST00000395453 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
SCAF11-203ENST00000395453 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
SCAF11-203ENST00000395453 FOXI1Q12951 378 aa8.57□□□□□ -1.04
SCAF11-203ENST00000395453 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
SCAF11-203ENST00000395453 MRAP2Q96G30 205 aa8.57□□□□□ -1.04
SCAF11-203ENST00000395453 NUP35Q8NFH5 326 aa8.56□□□□□ -1.04
SCAF11-203ENST00000395453 ISOC2Q96AB3 205 aa8.56□□□□□ -1.04
SCAF11-203ENST00000395453 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
SCAF11-203ENST00000395453 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
SCAF11-203ENST00000395453 TNXBP22105 4242 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 COX6A2Q02221 97 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 HIGD2BQ4VC39 106 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 FAM74A3Q4VXF1 159 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 Q6ZRU5 148 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 AMN1Q8IY45 258 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 TMEM101Q96IK0 257 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 BTF3L4Q96K17 158 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 CDC42SE2Q9NRR3 84 aa8.55□□□□□ -1.04
SCAF11-203ENST00000395453 A0A1B0GVG6 124 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
SCAF11-203ENST00000395453 RIGQ13278 110 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 C9JQL5 133 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 VCYO14598 125 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 CCL25O15444 150 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 XCL1P47992 114 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 LCE4AQ5TA78 99 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 ZNF664Q8N3J9 261 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 NRACQ8N912 160 aa8.54□□□□□ -1.04
SCAF11-203ENST00000395453 C7orf77A4D0Y5 90 aa8.53□□□□□ -1.04
SCAF11-203ENST00000395453 SMKR1H3BMG3 65 aa8.53□□□□□ -1.04
SCAF11-203ENST00000395453 PPP1R17O96001 155 aa8.53□□□□□ -1.04
SCAF11-203ENST00000395453 NAT8BQ9UHF3 227 aa8.53□□□□□ -1.04
SCAF11-203ENST00000395453 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
SCAF11-203ENST00000395453 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
SCAF11-203ENST00000395453 SMIM27A0A1W2PRY6 76 aa8.52□□□□□ -1.05
SCAF11-203ENST00000395453 SUMO2P61956 95 aaKnown RBP8.52□□□□□ -1.05
SCAF11-203ENST00000395453 SS18Q15532 418 aa8.52□□□□□ -1.05
SCAF11-203ENST00000395453 FAM104BQ5XKR9 115 aa8.52□□□□□ -1.05
SCAF11-203ENST00000395453 CD164L2Q6UWJ8 174 aa8.52□□□□□ -1.05
SCAF11-203ENST00000395453 SRSF3P84103 164 aaKnown RBP8.51□□□□□ -1.05
SCAF11-203ENST00000395453 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
SCAF11-203ENST00000395453 SMDT1Q9H4I9 107 aa8.51□□□□□ -1.05
SCAF11-203ENST00000395453 NAT8Q9UHE5 227 aa8.51□□□□□ -1.05
SCAF11-203ENST00000395453 ADIRFQ15847 76 aa8.5□□□□□ -1.05
SCAF11-203ENST00000395453 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
SCAF11-203ENST00000395453 UBE2D4Q9Y2X8 147 aa8.5□□□□□ -1.05
SCAF11-203ENST00000395453 TRBV24-1A0A075B6N3 115 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 A0A096LNI7 61 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 IGKV2-24A0A0C4DH68 120 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 LINC00862A6NCI5 91 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 C1orf196B1AJZ1 125 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 PHOX2AO14813 284 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 PPP1R2P9O14990 202 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 FCER1GP30273 86 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 RPL32P62910 135 aaKnown RBP8.49□□□□□ -1.05
SCAF11-203ENST00000395453 PEA15Q15121 130 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 STPG4Q8N801 248 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 C7orf33Q8WU49 177 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 KIR2DL4Q99706 377 aa8.49□□□□□ -1.05
SCAF11-203ENST00000395453 A0A1B0GW15 77 aa8.48□□□□□ -1.05
SCAF11-203ENST00000395453 SMAGPQ0VAQ4 97 aa8.48□□□□□ -1.05
SCAF11-203ENST00000395453 C20orf78Q9BR46 151 aa8.48□□□□□ -1.05
SCAF11-203ENST00000395453 TIMM21Q9BVV7 248 aa8.48□□□□□ -1.05
SCAF11-203ENST00000395453 LINC00474Q9P2X8 69 aa8.48□□□□□ -1.05
SCAF11-203ENST00000395453 CAMPP49913 170 aa8.47□□□□□ -1.05
SCAF11-203ENST00000395453 KRTAP19-4Q3LI73 84 aa8.47□□□□□ -1.05
SCAF11-203ENST00000395453 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
SCAF11-203ENST00000395453 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
SCAF11-203ENST00000395453 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
SCAF11-203ENST00000395453 SYCNQ0VAF6 134 aa8.46□□□□□ -1.06
SCAF11-203ENST00000395453 KRTAP4-11Q9BYQ6 195 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms