RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 HIGD1CA8MV81 97 aa9.76□□□□□ -0.85
SNCA-205ENST00000394991 ISOC2Q96AB3 205 aa9.76□□□□□ -0.85
SNCA-205ENST00000394991 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
SNCA-205ENST00000394991 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
SNCA-205ENST00000394991 Q6ZRP5 223 aa9.75□□□□□ -0.85
SNCA-205ENST00000394991 GATD1Q8NB37 220 aa9.75□□□□□ -0.85
SNCA-205ENST00000394991 V9GYV3 84 aa9.75□□□□□ -0.85
SNCA-205ENST00000394991 A0A1B0GUT8 65 aa9.74□□□□□ -0.85
SNCA-205ENST00000394991 UBE2L6O14933 153 aa9.74□□□□□ -0.85
SNCA-205ENST00000394991 RAB14P61106 215 aa9.74□□□□□ -0.85
SNCA-205ENST00000394991 CHCHD10Q8WYQ3 142 aaPredicted RBP9.74□□□□□ -0.85
SNCA-205ENST00000394991 FAM231BA6NCW3 169 aa9.73□□□□□ -0.85
SNCA-205ENST00000394991 AMTP48728 403 aa9.73□□□□□ -0.85
SNCA-205ENST00000394991 RPL39LQ96EH5 51 aaKnown RBP9.72□□□□□ -0.85
SNCA-205ENST00000394991 FOXI1Q12951 378 aa9.71□□□□□ -0.86
SNCA-205ENST00000394991 RIGQ13278 110 aa9.71□□□□□ -0.86
SNCA-205ENST00000394991 COTL1Q14019 142 aa9.71□□□□□ -0.86
SNCA-205ENST00000394991 NUP35Q8NFH5 326 aa9.71□□□□□ -0.86
SNCA-205ENST00000394991 LINC00526Q96FQ7 95 aa9.71□□□□□ -0.86
SNCA-205ENST00000394991 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
SNCA-205ENST00000394991 NAT8BQ9UHF3 227 aa9.71□□□□□ -0.86
SNCA-205ENST00000394991 TMEM191AQ9H0A3 160 aa9.7□□□□□ -0.86
SNCA-205ENST00000394991 SDHAF1A6NFY7 115 aa9.68□□□□□ -0.86
SNCA-205ENST00000394991 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
SNCA-205ENST00000394991 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
SNCA-205ENST00000394991 MUC2Q02817 5179 aa9.68□□□□□ -0.86
SNCA-205ENST00000394991 SMIM27A0A1W2PRY6 76 aa9.67□□□□□ -0.86
SNCA-205ENST00000394991 RAB4AP20338 218 aa9.67□□□□□ -0.86
SNCA-205ENST00000394991 PMCHP20382 165 aa9.67□□□□□ -0.86
SNCA-205ENST00000394991 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
SNCA-205ENST00000394991 APCSP02743 223 aa9.66□□□□□ -0.86
SNCA-205ENST00000394991 CAMPP49913 170 aa9.66□□□□□ -0.86
SNCA-205ENST00000394991 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
SNCA-205ENST00000394991 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
SNCA-205ENST00000394991 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.86
SNCA-205ENST00000394991 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.86
SNCA-205ENST00000394991 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 I3L3M4 83 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 NCR2O95944 276 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 PTTG1IPP53801 180 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 CLLU1Q5K131 121 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 AMMECR1LQ6DCA0 310 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
SNCA-205ENST00000394991 IGHV1-58A0A0C4DH39 117 aa9.64□□□□□ -0.87
SNCA-205ENST00000394991 TRBV6-5A0A0K0K1A5 114 aa9.64□□□□□ -0.87
SNCA-205ENST00000394991 XCL1P47992 114 aa9.64□□□□□ -0.87
SNCA-205ENST00000394991 MRPL54Q6P161 138 aaKnown RBP9.64□□□□□ -0.87
SNCA-205ENST00000394991 RNASEKQ6P5S7 137 aaKnown RBP9.64□□□□□ -0.87
SNCA-205ENST00000394991 ZNF664Q8N3J9 261 aa9.64□□□□□ -0.87
SNCA-205ENST00000394991 PRR26Q8N8Z3 221 aa9.64□□□□□ -0.87
SNCA-205ENST00000394991 FGF6P10767 208 aa9.63□□□□□ -0.87
SNCA-205ENST00000394991 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
SNCA-205ENST00000394991 TMEM242Q9NWH2 141 aa9.63□□□□□ -0.87
SNCA-205ENST00000394991 A0A1B0GW15 77 aa9.62□□□□□ -0.87
SNCA-205ENST00000394991 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
SNCA-205ENST00000394991 CCL25O15444 150 aa9.62□□□□□ -0.87
SNCA-205ENST00000394991 IFITM2Q01629 132 aa9.62□□□□□ -0.87
SNCA-205ENST00000394991 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
SNCA-205ENST00000394991 MRPL51Q4U2R6 128 aaKnown RBP9.62□□□□□ -0.87
SNCA-205ENST00000394991 FAM104BQ5XKR9 115 aa9.62□□□□□ -0.87
SNCA-205ENST00000394991 OR5A1Q8NGJ0 315 aa9.62□□□□□ -0.87
SNCA-205ENST00000394991 LINC00959A0A1B0GUT2 108 aa9.61□□□□□ -0.87
SNCA-205ENST00000394991 S100A8P05109 93 aa9.61□□□□□ -0.87
SNCA-205ENST00000394991 PNRC1Q12796 327 aaPredicted RBP9.61□□□□□ -0.87
SNCA-205ENST00000394991 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
SNCA-205ENST00000394991 H7C423 109 aa9.6□□□□□ -0.87
SNCA-205ENST00000394991 PPP1R17O96001 155 aa9.6□□□□□ -0.87
SNCA-205ENST00000394991 TSHBP01222 138 aa9.6□□□□□ -0.87
SNCA-205ENST00000394991 MT-ND6P03923 174 aa9.6□□□□□ -0.87
SNCA-205ENST00000394991 POLR2KP53803 58 aaKnown RBP9.6□□□□□ -0.87
SNCA-205ENST00000394991 HBBP68871 147 aa9.6□□□□□ -0.87
SNCA-205ENST00000394991 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 KRTAP9-6A0A140TA67 174 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 F8W036 122 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 VCYO14598 125 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 MT-ND4LP03901 98 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 CKS2P33552 79 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 NRACQ8N912 160 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 BTF3L4Q96K17 158 aa9.59□□□□□ -0.87
SNCA-205ENST00000394991 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
SNCA-205ENST00000394991 FCER1GP30273 86 aa9.58□□□□□ -0.88
SNCA-205ENST00000394991 SUMO2P61956 95 aaKnown RBP9.58□□□□□ -0.88
SNCA-205ENST00000394991 C9orf116Q5BN46 136 aaPredicted RBP9.58□□□□□ -0.88
SNCA-205ENST00000394991 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
SNCA-205ENST00000394991 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
SNCA-205ENST00000394991 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
SNCA-205ENST00000394991 IGLV4-69A0A075B6H9 119 aa9.57□□□□□ -0.88
SNCA-205ENST00000394991 A0A1B0GXF2 115 aa9.57□□□□□ -0.88
SNCA-205ENST00000394991 LINC00862A6NCI5 91 aa9.57□□□□□ -0.88
SNCA-205ENST00000394991 ESDP10768 282 aa9.57□□□□□ -0.88
SNCA-205ENST00000394991 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
SNCA-205ENST00000394991 LCE2AQ5TA79 106 aaPredicted RBP9.57□□□□□ -0.88
SNCA-205ENST00000394991 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
SNCA-205ENST00000394991 C7orf77A4D0Y5 90 aa9.56□□□□□ -0.88
SNCA-205ENST00000394991 D6R8Y8 96 aa9.56□□□□□ -0.88
SNCA-205ENST00000394991 UQCC3Q6UW78 93 aa9.56□□□□□ -0.88
SNCA-205ENST00000394991 ATP5L2Q7Z4Y8 100 aa9.56□□□□□ -0.88
SNCA-205ENST00000394991 KIR2DL4Q99706 377 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms