RNA–Protein interactions for RNA: ENST00000393637.5

FGFR4-202, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FGFR4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-202ENST00000393637 NPC2P61916 151 aa12.73□□□□□ -0.37
FGFR4-202ENST00000393637 SPANXA1Q9NS26 97 aa12.73□□□□□ -0.37
FGFR4-202ENST00000393637 DGAT2L7PQ6IED9 249 aa12.72□□□□□ -0.37
FGFR4-202ENST00000393637 IL17DQ8TAD2 202 aa12.72□□□□□ -0.37
FGFR4-202ENST00000393637 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
FGFR4-202ENST00000393637 PRO0461Q9UI25 63 aa12.72□□□□□ -0.37
FGFR4-202ENST00000393637 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.72□□□□□ -0.37
FGFR4-202ENST00000393637 CLUHP3Q96NS8 147 aa12.72□□□□□ -0.37
FGFR4-202ENST00000393637 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
FGFR4-202ENST00000393637 J3QKU1 62 aa12.71□□□□□ -0.37
FGFR4-202ENST00000393637 GAGE4Q13068 117 aa12.71□□□□□ -0.37
FGFR4-202ENST00000393637 GAGE5Q13069 117 aa12.71□□□□□ -0.37
FGFR4-202ENST00000393637 ZNF418Q8TF45 676 aaPredicted RBP12.71□□□□□ -0.37
FGFR4-202ENST00000393637 PRSS2P07478 247 aa12.71□□□□□ -0.38
FGFR4-202ENST00000393637 INSL3P51460 131 aa12.71□□□□□ -0.38
FGFR4-202ENST00000393637 TMEM263Q8WUH6 116 aaKnown RBP12.71□□□□□ -0.38
FGFR4-202ENST00000393637 GEMIN7Q9H840 131 aaKnown RBP12.71□□□□□ -0.38
FGFR4-202ENST00000393637 CDKN2A-AS1Q9UH64 79 aa12.71□□□□□ -0.38
FGFR4-202ENST00000393637 IGHV1-58A0A0C4DH39 117 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 ADAMTSL4-AS1Q5T5F5 129 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 PRO1854Q9UHT4 67 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 TINCRA0A1B0GVN0 87 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 GAGE7O76087 117 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 COX6A2Q02221 97 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 C16orf95Q9H693 158 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
FGFR4-202ENST00000393637 TENM1Q9UKZ4 2725 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 UBE2D3P61077 147 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 UBE2D2P62837 147 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 NTM-AS1Q6ZSK4 140 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 VSIG2Q96IQ7 327 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 LOC100131303A0A0U1RQF7 123 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 K7EQD1 137 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 TCL1BO95988 128 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 IGLV1-51P01701 117 aa12.69□□□□□ -0.38
FGFR4-202ENST00000393637 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
FGFR4-202ENST00000393637 SCGB1C2P0DMR2 95 aa12.68□□□□□ -0.38
FGFR4-202ENST00000393637 SMCPP49901 116 aaPredicted RBP12.68□□□□□ -0.38
FGFR4-202ENST00000393637 CRYBA4P53673 196 aa12.68□□□□□ -0.38
FGFR4-202ENST00000393637 LITAFQ99732 161 aa12.68□□□□□ -0.38
FGFR4-202ENST00000393637 C19orf73Q9NVV2 129 aa12.68□□□□□ -0.38
FGFR4-202ENST00000393637 TRGV2A0A075B6R0 118 aa12.67□□□□□ -0.38
FGFR4-202ENST00000393637 RPL36AP83881 106 aaKnown RBP12.67□□□□□ -0.38
FGFR4-202ENST00000393637 DAND5Q8N907 189 aa12.67□□□□□ -0.38
FGFR4-202ENST00000393637 RPL36ALQ969Q0 106 aaKnown RBP12.67□□□□□ -0.38
FGFR4-202ENST00000393637 TRAV13-1A0A0B4J241 112 aa12.67□□□□□ -0.38
FGFR4-202ENST00000393637 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
FGFR4-202ENST00000393637 TRRAPQ9Y4A5 3859 aa12.66□□□□□ -0.38
FGFR4-202ENST00000393637 HILS1P60008 231 aa12.66□□□□□ -0.38
FGFR4-202ENST00000393637 KRTAP10-3P60369 221 aa12.66□□□□□ -0.38
FGFR4-202ENST00000393637 TRAV4A0A0B4J268 109 aa12.65□□□□□ -0.38
FGFR4-202ENST00000393637 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
FGFR4-202ENST00000393637 TMEM101Q96IK0 257 aa12.64□□□□□ -0.39
FGFR4-202ENST00000393637 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
FGFR4-202ENST00000393637 IGHV3-33P01772 117 aa12.63□□□□□ -0.39
FGFR4-202ENST00000393637 Q1RN00 199 aa12.63□□□□□ -0.39
FGFR4-202ENST00000393637 LINC00242Q5T6M2 205 aa12.63□□□□□ -0.39
FGFR4-202ENST00000393637 CSNK1G2-AS1Q8NCQ2 148 aa12.62□□□□□ -0.39
FGFR4-202ENST00000393637 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
FGFR4-202ENST00000393637 DAZ2Q13117 558 aaKnown RBP12.61□□□□□ -0.39
FGFR4-202ENST00000393637 C16orf74Q96GX8 76 aa12.61□□□□□ -0.39
FGFR4-202ENST00000393637 DAZ4Q86SG3 579 aaKnown RBP12.61□□□□□ -0.39
FGFR4-202ENST00000393637 DAZ3Q9NR90 486 aaKnown RBP12.61□□□□□ -0.39
FGFR4-202ENST00000393637 TRBV10-1A0A0K0K1A3 114 aa12.6□□□□□ -0.39
FGFR4-202ENST00000393637 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
FGFR4-202ENST00000393637 NSD1Q96L73 2696 aaPredicted RBP12.6□□□□□ -0.39
FGFR4-202ENST00000393637 SPATA3Q8NHX4 192 aa12.6□□□□□ -0.39
FGFR4-202ENST00000393637 A0A0B4J2C4 111 aa12.59□□□□□ -0.39
FGFR4-202ENST00000393637 IGKV3OR2-268A0A0C4DH90 116 aa12.59□□□□□ -0.39
FGFR4-202ENST00000393637 ATRQ13535 2644 aa12.59□□□□□ -0.39
FGFR4-202ENST00000393637 TRGV4A0A0C4DH28 118 aa12.59□□□□□ -0.39
FGFR4-202ENST00000393637 PF4P02776 101 aa12.59□□□□□ -0.39
FGFR4-202ENST00000393637 TIRAPP58753 221 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 LYRM7Q5U5X0 104 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.58□□□□□ -0.4
FGFR4-202ENST00000393637 UBE2L6O14933 153 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 CMC4P56277 68 aaPredicted RBP12.58□□□□□ -0.4
FGFR4-202ENST00000393637 MIAQ16674 131 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 SBSPONQ8IVN8 264 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 Q9H8V8 135 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
FGFR4-202ENST00000393637 IGLV5-45A0A087WSX0 123 aa12.57□□□□□ -0.4
FGFR4-202ENST00000393637 LY6G6DO95868 133 aa12.57□□□□□ -0.4
FGFR4-202ENST00000393637 HERVK_113P63121 156 aa12.57□□□□□ -0.4
FGFR4-202ENST00000393637 C1QTNF4Q9BXJ3 329 aa12.57□□□□□ -0.4
FGFR4-202ENST00000393637 TRBV20-1A0A075B6N2 111 aa12.56□□□□□ -0.4
FGFR4-202ENST00000393637 J3QR89 54 aa12.56□□□□□ -0.4
FGFR4-202ENST00000393637 FOXI1Q12951 378 aa12.56□□□□□ -0.4
FGFR4-202ENST00000393637 SPANXDQ9BXN6 97 aa12.56□□□□□ -0.4
FGFR4-202ENST00000393637 SPANXCQ9NY87 97 aa12.56□□□□□ -0.4
FGFR4-202ENST00000393637 GAGE12HA6NDE8 117 aa12.55□□□□□ -0.4
FGFR4-202ENST00000393637 GAGE6Q13070 117 aa12.55□□□□□ -0.4
FGFR4-202ENST00000393637 TMEM243Q9BU79 118 aa12.55□□□□□ -0.4
FGFR4-202ENST00000393637 SMIM1B2RUZ4 78 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms