RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CHCHD5Q9BSY4 110 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 C11orf68Q9H3H3 251 aaKnown RBP6.05□□□□□ -1.44
TDP1-203ENST00000393454 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 TRBV6-8A0A0A6YYG3 113 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 NPSP0C0P6 89 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 HNRNPA3P51991 378 aaKnown RBP6.04□□□□□ -1.44
TDP1-203ENST00000393454 GAGE6Q13070 117 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 TMEM101Q96IK0 257 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 C2orf88Q9BSF0 95 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 TIMM21Q9BVV7 248 aa6.04□□□□□ -1.44
TDP1-203ENST00000393454 TMEM170BQ5T4T1 132 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 OR5A1Q8NGJ0 315 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 FAM104AQ969W3 186 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 AMELXQ99217 191 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 TP73-AS1Q9UF72 201 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 A0A0J9YXV3 536 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 COX8AP10176 69 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 C11orf45Q8TAV5 145 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
TDP1-203ENST00000393454 IGKV2D-26A0A0A0MRZ7 120 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 TMEM262E9PQX1 116 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 H7C423 109 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 NANOS2P60321 138 aaKnown RBP6.02□□□□□ -1.45
TDP1-203ENST00000393454 CTAG1AP78358 180 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 MRPS36P82909 103 aaKnown RBP6.02□□□□□ -1.45
TDP1-203ENST00000393454 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
TDP1-203ENST00000393454 Q6ZTC4 211 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 TM2D3Q9BRN9 247 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 HERVK_113P61574 105 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 MRPL52Q86TS9 123 aaKnown RBP6.02□□□□□ -1.45
TDP1-203ENST00000393454 PCP2Q8IVA1 136 aa6.02□□□□□ -1.45
TDP1-203ENST00000393454 TRAV8-6A0A0B4J262 113 aa6.01□□□□□ -1.45
TDP1-203ENST00000393454 NFE4Q86UQ8 179 aa6.01□□□□□ -1.45
TDP1-203ENST00000393454 CSDC2Q9Y534 153 aaKnown RBP6.01□□□□□ -1.45
TDP1-203ENST00000393454 TTTY13Q9BZ97 58 aa6□□□□□ -1.45
TDP1-203ENST00000393454 GEMIN7Q9H840 131 aaKnown RBP6□□□□□ -1.45
TDP1-203ENST00000393454 CDC42SE2Q9NRR3 84 aa6□□□□□ -1.45
TDP1-203ENST00000393454 TRAV13-1A0A0B4J241 112 aa6□□□□□ -1.45
TDP1-203ENST00000393454 ZNF25P17030 456 aaPredicted RBP6□□□□□ -1.45
TDP1-203ENST00000393454 UBE2D1P51668 147 aa6□□□□□ -1.45
TDP1-203ENST00000393454 SH2D6Q7Z4S9 175 aa6□□□□□ -1.45
TDP1-203ENST00000393454 BOD1L2Q8IYS8 172 aa6□□□□□ -1.45
TDP1-203ENST00000393454 DEFB131BA0A096LNP1 70 aa5.99□□□□□ -1.45
TDP1-203ENST00000393454 IGKV3OR2-268A0A0C4DH90 116 aa5.99□□□□□ -1.45
TDP1-203ENST00000393454 TINCRA0A1B0GVN0 87 aa5.99□□□□□ -1.45
TDP1-203ENST00000393454 E9PLD3 99 aa5.99□□□□□ -1.45
TDP1-203ENST00000393454 ZNF22P17026 224 aaPredicted RBP5.99□□□□□ -1.45
TDP1-203ENST00000393454 BATFQ16520 125 aa5.99□□□□□ -1.45
TDP1-203ENST00000393454 MRPS16Q9Y3D3 137 aaKnown RBP5.99□□□□□ -1.45
TDP1-203ENST00000393454 IGLV4-60A0A075B6I1 120 aa5.98□□□□□ -1.45
TDP1-203ENST00000393454 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
TDP1-203ENST00000393454 M0R143 59 aa5.98□□□□□ -1.45
TDP1-203ENST00000393454 LINC00469Q8N7U9 141 aa5.98□□□□□ -1.45
TDP1-203ENST00000393454 TMEM223A0PJW6 202 aa5.98□□□□□ -1.45
TDP1-203ENST00000393454 DLEU1O43261 78 aa5.98□□□□□ -1.45
TDP1-203ENST00000393454 MAPKAPK5-AS1Q8N8E1 139 aa5.98□□□□□ -1.45
TDP1-203ENST00000393454 HINT1P49773 126 aaPredicted RBP5.97□□□□□ -1.45
TDP1-203ENST00000393454 RBX1P62877 108 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 MPV17L2Q567V2 206 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 C2orf91Q6ZV80 131 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 SNHG12Q9BXW3 62 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 DNHD1Q96M86 4753 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 H3BNG1 76 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 EREGO14944 169 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
TDP1-203ENST00000393454 TIRAPP58753 221 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 SEC11AP67812 179 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 COX6A2Q02221 97 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 LINC00242Q5T6M2 205 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 LELP1Q5T871 98 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 LYPD5Q6UWN5 251 aa5.97□□□□□ -1.45
TDP1-203ENST00000393454 TRAV10A0A0B4J240 114 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 ZNF815PA8K554 130 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 H3BRM9 83 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 LEPROTO15243 131 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 SIVA1O15304 175 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 SPINK8P0C7L1 97 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 HERVK_113P63121 156 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 CDKN2A-AS1Q9UH64 79 aa5.96□□□□□ -1.46
TDP1-203ENST00000393454 A0A1B0GUV1 79 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 J3QQQ9 107 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 B9D2Q9BPU9 175 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 HUWE1Q7Z6Z7 4374 aaKnown RBP5.95□□□□□ -1.46
TDP1-203ENST00000393454 TRAV8-3A0A0A6YYJ7 113 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 TSPEAR-AS2P59090 65 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 C4orf48Q5BLP8 95 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 CLPSL2Q6UWE3 100 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 SCGB1D4Q6XE38 83 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 PLEKHB2Q96CS7 222 aa5.95□□□□□ -1.46
TDP1-203ENST00000393454 ANGP03950 147 aaKnown RBP5.94□□□□□ -1.46
TDP1-203ENST00000393454 IGHV3-30-3P0DP02 117 aa5.94□□□□□ -1.46
TDP1-203ENST00000393454 FAM19A3Q7Z5A8 133 aa5.94□□□□□ -1.46
TDP1-203ENST00000393454 Q8N3U1 123 aa5.94□□□□□ -1.46
TDP1-203ENST00000393454 IGLV5-45A0A087WSX0 123 aa5.94□□□□□ -1.46
TDP1-203ENST00000393454 IGHV1-58A0A0C4DH39 117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms