RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 FAM19A3Q7Z5A8 133 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 SBSPONQ8IVN8 264 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 C9orf66Q5T8R8 295 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 NTM-AS1Q6ZSK4 140 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 VSIG2Q96IQ7 327 aa10.16□□□□□ -0.78
MKS1-203ENST00000393120 GAGE12JA6NER3 117 aa10.15□□□□□ -0.78
MKS1-203ENST00000393120 GAGE4Q13068 117 aa10.15□□□□□ -0.78
MKS1-203ENST00000393120 GAGE5Q13069 117 aa10.15□□□□□ -0.78
MKS1-203ENST00000393120 GAGE13Q4V321 117 aa10.15□□□□□ -0.78
MKS1-203ENST00000393120 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.78
MKS1-203ENST00000393120 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.79
MKS1-203ENST00000393120 H7C423 109 aa10.15□□□□□ -0.79
MKS1-203ENST00000393120 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.79
MKS1-203ENST00000393120 CBY1Q9Y3M2 126 aa10.15□□□□□ -0.79
MKS1-203ENST00000393120 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
MKS1-203ENST00000393120 TMEM238C9JI98 176 aa10.14□□□□□ -0.79
MKS1-203ENST00000393120 CRLF1O75462 422 aa10.14□□□□□ -0.79
MKS1-203ENST00000393120 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
MKS1-203ENST00000393120 OCIAD2Q56VL3 154 aa10.14□□□□□ -0.79
MKS1-203ENST00000393120 LINC00612Q8N6U2 182 aa10.14□□□□□ -0.79
MKS1-203ENST00000393120 KIR2DL5BQ8NHK3 375 aa10.14□□□□□ -0.79
MKS1-203ENST00000393120 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
MKS1-203ENST00000393120 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
MKS1-203ENST00000393120 FHL2Q14192 279 aa10.13□□□□□ -0.79
MKS1-203ENST00000393120 SETD2Q9BYW2 2564 aaPredicted RBP10.13□□□□□ -0.79
MKS1-203ENST00000393120 TRGV4A0A0C4DH28 118 aa10.13□□□□□ -0.79
MKS1-203ENST00000393120 HERVK_113P63121 156 aa10.13□□□□□ -0.79
MKS1-203ENST00000393120 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
MKS1-203ENST00000393120 GCN1Q92616 2671 aaKnown RBP10.12□□□□□ -0.79
MKS1-203ENST00000393120 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
MKS1-203ENST00000393120 CFC1P0CG37 223 aa10.12□□□□□ -0.79
MKS1-203ENST00000393120 CITED1Q99966 193 aa10.12□□□□□ -0.79
MKS1-203ENST00000393120 TMEM243Q9BU79 118 aa10.12□□□□□ -0.79
MKS1-203ENST00000393120 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
MKS1-203ENST00000393120 CDKN2A-AS1Q9UH64 79 aa10.12□□□□□ -0.79
MKS1-203ENST00000393120 LINC00242Q5T6M2 205 aa10.11□□□□□ -0.79
MKS1-203ENST00000393120 ZFAND6Q6FIF0 208 aa10.11□□□□□ -0.79
MKS1-203ENST00000393120 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
MKS1-203ENST00000393120 SETXQ7Z333 2677 aaKnown RBP10.11□□□□□ -0.79
MKS1-203ENST00000393120 SPINK8P0C7L1 97 aa10.11□□□□□ -0.79
MKS1-203ENST00000393120 RBX1P62877 108 aa10.11□□□□□ -0.79
MKS1-203ENST00000393120 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
MKS1-203ENST00000393120 LITAFQ99732 161 aa10.11□□□□□ -0.79
MKS1-203ENST00000393120 X6R8D5 127 aa10.1□□□□□ -0.79
MKS1-203ENST00000393120 HECTD1Q9ULT8 2610 aa10.1□□□□□ -0.79
MKS1-203ENST00000393120 IGLV5-39A0A0G2JS06 123 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 F8W1H4 67 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 APOMO95445 188 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 TSPAN13O95857 204 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 COX6A2Q02221 97 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.09□□□□□ -0.79
MKS1-203ENST00000393120 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 K7ERU9 68 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 TIMM17BO60830 172 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 SPATA3Q8NHX4 192 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 SPANXDQ9BXN6 97 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 SPANXCQ9NY87 97 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 PRO1854Q9UHT4 67 aa10.09□□□□□ -0.79
MKS1-203ENST00000393120 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
MKS1-203ENST00000393120 A4D1N5 150 aa10.08□□□□□ -0.8
MKS1-203ENST00000393120 UBE2L6O14933 153 aa10.08□□□□□ -0.8
MKS1-203ENST00000393120 OTOGQ6ZRI0 2925 aa10.08□□□□□ -0.8
MKS1-203ENST00000393120 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
MKS1-203ENST00000393120 NDUFA1O15239 70 aa10.07□□□□□ -0.8
MKS1-203ENST00000393120 WFDC9Q8NEX5 89 aa10.07□□□□□ -0.8
MKS1-203ENST00000393120 RNF183Q96D59 192 aa10.07□□□□□ -0.8
MKS1-203ENST00000393120 TRBV6-8A0A0A6YYG3 113 aa10.07□□□□□ -0.8
MKS1-203ENST00000393120 LYRM7Q5U5X0 104 aa10.07□□□□□ -0.8
MKS1-203ENST00000393120 H3BMG7 143 aa10.06□□□□□ -0.8
MKS1-203ENST00000393120 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
MKS1-203ENST00000393120 A8MZ25 164 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 WIPF1O43516 503 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 MIAQ16674 131 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 TRAV13-1A0A0B4J241 112 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 APOC4P55056 127 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 ADAMTSL4-AS1Q5T5F5 129 aa10.05□□□□□ -0.8
MKS1-203ENST00000393120 NOTCH2Q04721 2471 aa10.04□□□□□ -0.8
MKS1-203ENST00000393120 C2CD3Q4AC94 2353 aa10.04□□□□□ -0.8
MKS1-203ENST00000393120 SMIM1B2RUZ4 78 aa10.04□□□□□ -0.8
MKS1-203ENST00000393120 F5H768 121 aa10.04□□□□□ -0.8
MKS1-203ENST00000393120 EIF4EBP3O60516 100 aaPredicted RBP10.04□□□□□ -0.8
MKS1-203ENST00000393120 IFITM1P13164 125 aa10.04□□□□□ -0.8
MKS1-203ENST00000393120 PRO0461Q9UI25 63 aa10.04□□□□□ -0.8
MKS1-203ENST00000393120 FN1P02751 2386 aaKnown RBP10.04□□□□□ -0.8
MKS1-203ENST00000393120 NIPBLQ6KC79 2804 aaeCLIP10.04□□□□□ -0.8
MKS1-203ENST00000393120 TRBV20-1A0A075B6N2 111 aa10.03□□□□□ -0.8
MKS1-203ENST00000393120 IGHV3-33P01772 117 aa10.03□□□□□ -0.8
MKS1-203ENST00000393120 LOC107984156A0A0G2JMH3 177 aa10.02□□□□□ -0.81
MKS1-203ENST00000393120 G3V4G9 280 aa10.02□□□□□ -0.81
MKS1-203ENST00000393120 PRSS2P07478 247 aa10.02□□□□□ -0.81
MKS1-203ENST00000393120 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
MKS1-203ENST00000393120 ARL17AQ8IVW1 177 aa10.02□□□□□ -0.81
MKS1-203ENST00000393120 PRO0255Q9UI72 69 aa10.02□□□□□ -0.81
MKS1-203ENST00000393120 WFDC2Q14508 124 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms