RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 MT4P47944 62 aa-0.92□□□□□ -2.56
RNU6-550P-201ENST00000391057 BAGE2Q86Y30 109 aa-0.92□□□□□ -2.56
RNU6-550P-201ENST00000391057 ANP32BQ92688 251 aaKnown RBP-0.92□□□□□ -2.56
RNU6-550P-201ENST00000391057 LINC00472Q9H8W2 130 aa-0.92□□□□□ -2.56
RNU6-550P-201ENST00000391057 ZNF236Q9UL36 1845 aa-0.92□□□□□ -2.56
RNU6-550P-201ENST00000391057 PAPPAQ13219 1627 aa-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 LAMA5O15230 3695 aa-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 MAP1BP46821 2468 aaKnown RBP-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 WNK1Q9H4A3 2382 aa-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 UQCR11O14957 56 aa-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 SMIM21Q3B7S5 101 aa-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 KRTAP19-8Q3LI54 63 aa-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 PPIP5K1Q6PFW1 1433 aa-0.93□□□□□ -2.56
RNU6-550P-201ENST00000391057 SETXQ7Z333 2677 aaKnown RBP-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 F8VRH5 84 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 APOC3P02656 99 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 C12orf73Q69YU5 71 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 COPS9Q8WXC6 57 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 MAFIPQ8WZ33 124 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 PDCD10Q9BUL8 212 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 SPEF2Q9C093 1822 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 COL6A3P12111 3177 aa-0.94□□□□□ -2.56
RNU6-550P-201ENST00000391057 SPINK4O60575 86 aa-0.95□□□□□ -2.56
RNU6-550P-201ENST00000391057 TPPP2P59282 170 aa-0.95□□□□□ -2.56
RNU6-550P-201ENST00000391057 Q6AWC8 147 aa-0.95□□□□□ -2.56
RNU6-550P-201ENST00000391057 Q8N8P6 123 aa-0.95□□□□□ -2.56
RNU6-550P-201ENST00000391057 TSC2P49815 1807 aa-0.95□□□□□ -2.56
RNU6-550P-201ENST00000391057 PI4KAP42356 2102 aa-0.96□□□□□ -2.56
RNU6-550P-201ENST00000391057 NDUFA4L2Q9NRX3 87 aa-0.96□□□□□ -2.56
RNU6-550P-201ENST00000391057 ARAP2Q8WZ64 1704 aa-0.96□□□□□ -2.56
RNU6-550P-201ENST00000391057 HYDINQ4G0P3 5121 aa-0.96□□□□□ -2.56
RNU6-550P-201ENST00000391057 TENM2Q9NT68 2774 aa-0.96□□□□□ -2.56
RNU6-550P-201ENST00000391057 NF1P21359 2839 aa-0.97□□□□□ -2.56
RNU6-550P-201ENST00000391057 LRP1BQ9NZR2 4599 aa-0.97□□□□□ -2.56
RNU6-550P-201ENST00000391057 MGST2Q99735 147 aa-0.97□□□□□ -2.56
RNU6-550P-201ENST00000391057 FXYD6Q9H0Q3 95 aa-0.97□□□□□ -2.56
RNU6-550P-201ENST00000391057 DYNLRB1Q9NP97 96 aa-0.97□□□□□ -2.56
RNU6-550P-201ENST00000391057 CEP152O94986 1710 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 SBF2Q86WG5 1849 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 DOCK1Q14185 1865 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 IGLC7A0M8Q6 106 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 DEFB123Q8N688 67 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 PFDN5Q99471 154 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 RERGLQ9H628 205 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 LINC01558Q9Y6Z2 57 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 KIF21AQ7Z4S6 1674 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 ACANP16112 2415 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 EP300Q09472 2414 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 MYOM3Q5VTT5 1437 aa-0.98□□□□□ -2.57
RNU6-550P-201ENST00000391057 PATJQ8NI35 1801 aa-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 SHANK2Q9UPX8 1470 aa-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 USH2AO75445 5202 aa-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 M0R2T5 61 aa-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 ARPC4P59998 168 aa-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 LSM10Q969L4 123 aaKnown RBP-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 SERP1Q9Y6X1 66 aa-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 CFTRP13569 1480 aa-0.99□□□□□ -2.57
RNU6-550P-201ENST00000391057 DOCK2Q92608 1830 aa-1□□□□□ -2.57
RNU6-550P-201ENST00000391057 TRBV7-3A0A075B6L6 115 aa-1□□□□□ -2.57
RNU6-550P-201ENST00000391057 PIEZO2Q9H5I5 2752 aa-1□□□□□ -2.57
RNU6-550P-201ENST00000391057 GRIN2AQ12879 1464 aa-1□□□□□ -2.57
RNU6-550P-201ENST00000391057 RYR1P21817 5038 aa-1□□□□□ -2.57
RNU6-550P-201ENST00000391057 FLNBO75369 2602 aaKnown RBP-1.01□□□□□ -2.57
RNU6-550P-201ENST00000391057 POLA1P09884 1462 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-550P-201ENST00000391057 LOC285095A0A1B0GVY8 99 aa-1.02□□□□□ -2.57
RNU6-550P-201ENST00000391057 HMGN4O00479 90 aa-1.02□□□□□ -2.57
RNU6-550P-201ENST00000391057 TSLPQ969D9 159 aa-1.02□□□□□ -2.57
RNU6-550P-201ENST00000391057 RIMS1Q86UR5 1692 aaKnown RBP-1.03□□□□□ -2.57
RNU6-550P-201ENST00000391057 GAPVD1Q14C86 1478 aa-1.03□□□□□ -2.57
RNU6-550P-201ENST00000391057 SFT2D2O95562 160 aa-1.03□□□□□ -2.57
RNU6-550P-201ENST00000391057 SNRNP25Q9BV90 132 aaKnown RBP-1.03□□□□□ -2.57
RNU6-550P-201ENST00000391057 PAIP2BQ9ULR5 123 aaKnown RBP-1.03□□□□□ -2.57
RNU6-550P-201ENST00000391057 GVINP1Q7Z2Y8 2422 aa-1.04□□□□□ -2.58
RNU6-550P-201ENST00000391057 DEFB105AQ8NG35 78 aa-1.04□□□□□ -2.58
RNU6-550P-201ENST00000391057 TMEM263Q8WUH6 116 aaKnown RBP-1.04□□□□□ -2.58
RNU6-550P-201ENST00000391057 PPP3R2Q96LZ3 170 aa-1.04□□□□□ -2.58
RNU6-550P-201ENST00000391057 NAA60Q9H7X0 242 aa-1.04□□□□□ -2.58
RNU6-550P-201ENST00000391057 UBR4Q5T4S7 5183 aa-1.05□□□□□ -2.58
RNU6-550P-201ENST00000391057 TRBV7-4A0A0J9YYF1 115 aa-1.05□□□□□ -2.58
RNU6-550P-201ENST00000391057 KLK9Q2XQG4 91 aa-1.05□□□□□ -2.58
RNU6-550P-201ENST00000391057 SPANXDQ9BXN6 97 aa-1.05□□□□□ -2.58
RNU6-550P-201ENST00000391057 ARHGEF12Q9NZN5 1544 aa-1.05□□□□□ -2.58
RNU6-550P-201ENST00000391057 RAPGEF6Q8TEU7 1601 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 SETD2Q9BYW2 2564 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 LOC105371267A0A1B0GV96 52 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 FAM25AB3EWG3 89 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 FAM25CB3EWG5 89 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 FAM25GB3EWG6 89 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 MGPP08493 103 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 SELENOWP63302 87 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 MEIG1Q5JSS6 88 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 MRPL54Q6P161 138 aaKnown RBP-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 GOLGA4Q13439 2230 aaKnown RBP-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 SPTA1P02549 2419 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 IQSEC2Q5JU85 1478 aa-1.06□□□□□ -2.58
RNU6-550P-201ENST00000391057 KIAA1109Q2LD37 5005 aa-1.07□□□□□ -2.58
RNU6-550P-201ENST00000391057 CHD8Q9HCK8 2581 aa-1.07□□□□□ -2.58
RNU6-550P-201ENST00000391057 Q56UQ5 140 aa-1.07□□□□□ -2.58
RNU6-550P-201ENST00000391057 KDM5AP29375 1690 aaKnown RBP-1.07□□□□□ -2.58
RNU6-550P-201ENST00000391057 NSD3Q9BZ95 1437 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms